Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: UGT1A7 Sequence: fasta or formatted (530aa) NCBI GI: 41282213
Description:

UDP glycosyltransferase 1 family, polypeptide A7 precursor

Referenced in:

Stomach, Small Intestine, and Colon
Xenobiotic Pathways

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.2         38           2
 C cysteine            2.6         14           2
 D aspartate           4.2         22           1
 E glutamate           5.3         28           2
 F phenylalanine       5.8         31           2
 G glycine             6.0         32           2
 H histidine           3.6         19           1
 I isoleucine          4.3         23           1
 K lysine              5.7         30           2
 L leucine            11.3         60           3
 M methionine          4.0         21           2
 N asparagine          3.6         19           2
 P proline             5.1         27           1
 Q glutamine           1.9         10           1
 R arginine            4.2         22           1
 S serine              6.4         34           3
 T threonine           5.1         27           1
 V valine              8.3         44           4
 W tryptophan          1.9         10           1
 Y tyrosine            3.6         19           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   UDP glycosyltransferase 1 family, polypeptide A7 pre... 
UGT1A8                0.939   UDP glycosyltransferase 1 family, polypeptide A8 pre...
UGT1A10               0.936   UDP glycosyltransferase 1 family, polypeptide A10 pr...
UGT1A9                0.927   UDP glycosyltransferase 1 family, polypeptide A9 pre...
UGT1A6                0.644   UDP glycosyltransferase 1 family, polypeptide A6 iso...
UGT1A3                0.642   UDP glycosyltransferase 1 family, polypeptide A3 pre...
UGT1A5                0.641   UDP glycosyltransferase 1 family, polypeptide A5 pre...
UGT1A1                0.635   UDP glycosyltransferase 1 family, polypeptide A1 prec...
UGT1A4                0.635   UDP glycosyltransferase 1 family, polypeptide A4 prec...
UGT1A6                0.473   UDP glycosyltransferase 1 family, polypeptide A6 iso...
UGT2B17               0.397   UDP glucuronosyltransferase 2 family, polypeptide B17...
UGT2B15               0.391   UDP glycosyltransferase 2B15 
UGT2B10               0.376   UDP glucuronosyltransferase 2B10 isoform 1 
UGT2A2                0.375   UDP glucuronosyltransferase 2 family, polypeptide A...
UGT2B7                0.375   UDP glucuronosyltransferase 2B7 
UGT2B4                0.373   UDP glucuronosyltransferase 2B4 
UGT2B11               0.372   UDP glucuronosyltransferase 2 family, polypeptide B11...
UGT2A3                0.370   UDP glucuronosyltransferase 2 family, polypeptide A...
UGT2B28               0.367   UDP glucuronosyltransferase 2 family, polypeptide B2...
UGT2A1                0.365   UDP glucuronosyltransferase 2 family, polypeptide A...
UGT2B10               0.302   UDP glucuronosyltransferase 2B10 isoform 2 
UGT8                  0.281   UDP-galactose-ceramide galactosyltransferase 8 [Hom...
UGT8                  0.281   UDP-galactose-ceramide galactosyltransferase 8 [Homo...
LOC100294331          0.217   PREDICTED: similar to UDP glucuronosyltransferase 2...
UGT3A2                0.187   UDP glycosyltransferase 3 family, polypeptide A2 [Ho...
UGT3A1                0.184   UDP glycosyltransferase 3 family, polypeptide A1 [Ho...
LOC100291758          0.107   PREDICTED: similar to UDP-glucuronosyltransferase 2...
LOC100289734          0.107   PREDICTED: hypothetical protein XP_002346669 
NPR2                  0.008   natriuretic peptide receptor B precursor 
NPR1                  0.007   natriuretic peptide receptor 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press