Search of human proteins with 23308515

Search of human proteins with 23308515

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|23308515 hypothetical protein LOC133686 isoform 2 [Homo
sapiens]
         (279 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|146134341 hypothetical protein LOC133686 isoform 1 [Homo sapi...   563   e-161
gi|23308515 hypothetical protein LOC133686 isoform 2 [Homo sapiens]   563   e-161
gi|4506501 regulatory factor X-associated protein [Homo sapiens]       35   0.073
gi|4826908 phosphoinositide-3-kinase, regulatory subunit 2 (beta...    32   0.80 
gi|187475373 c-src tyrosine kinase [Homo sapiens]                      28   6.8  
gi|4758078 c-src tyrosine kinase [Homo sapiens]                        28   6.8  
gi|12667788 myosin, heavy polypeptide 9, non-muscle [Homo sapiens]     28   8.9  
gi|239756943 PREDICTED: hypothetical protein [Homo sapiens]            28   8.9  
gi|239751443 PREDICTED: hypothetical protein [Homo sapiens]            28   8.9  
gi|239745948 PREDICTED: hypothetical protein XP_002343622 [Homo ...    28   8.9  

>gi|146134341 hypothetical protein LOC133686 isoform 1 [Homo
           sapiens]
          Length = 442

 Score =  563 bits (1450), Expect = e-161
 Identities = 279/279 (100%), Positives = 279/279 (100%)

Query: 1   MLLAASKVLDRLKPVIGVNTDPERSEGHLCLPVRYTHSFPEALQKFYRGEFRWLWRQRIR 60
           MLLAASKVLDRLKPVIGVNTDPERSEGHLCLPVRYTHSFPEALQKFYRGEFRWLWRQRIR
Sbjct: 164 MLLAASKVLDRLKPVIGVNTDPERSEGHLCLPVRYTHSFPEALQKFYRGEFRWLWRQRIR 223

Query: 61  LYLEGTGINPVPVDLHEQQLSLNQHNRALNIERAHDERSEASGPQLLPVRALNEVFIGES 120
           LYLEGTGINPVPVDLHEQQLSLNQHNRALNIERAHDERSEASGPQLLPVRALNEVFIGES
Sbjct: 224 LYLEGTGINPVPVDLHEQQLSLNQHNRALNIERAHDERSEASGPQLLPVRALNEVFIGES 283

Query: 121 LSSRASYYEISVDDGPWEKQKSSGLNLCTGTGSKAWSFNINRVATQAVEDVLNIAKRQGN 180
           LSSRASYYEISVDDGPWEKQKSSGLNLCTGTGSKAWSFNINRVATQAVEDVLNIAKRQGN
Sbjct: 284 LSSRASYYEISVDDGPWEKQKSSGLNLCTGTGSKAWSFNINRVATQAVEDVLNIAKRQGN 343

Query: 181 LSLPLNRELVEKVTNEYNESLLYSPEEPKILFSIREPIANRVFSSSRQRCFSSKVCVRSR 240
           LSLPLNRELVEKVTNEYNESLLYSPEEPKILFSIREPIANRVFSSSRQRCFSSKVCVRSR
Sbjct: 344 LSLPLNRELVEKVTNEYNESLLYSPEEPKILFSIREPIANRVFSSSRQRCFSSKVCVRSR 403

Query: 241 CWDACMVVDGGTSFEFNDGAIASMMINKEDELRTVLLEQ 279
           CWDACMVVDGGTSFEFNDGAIASMMINKEDELRTVLLEQ
Sbjct: 404 CWDACMVVDGGTSFEFNDGAIASMMINKEDELRTVLLEQ 442


>gi|23308515 hypothetical protein LOC133686 isoform 2 [Homo sapiens]
          Length = 279

 Score =  563 bits (1450), Expect = e-161
 Identities = 279/279 (100%), Positives = 279/279 (100%)

Query: 1   MLLAASKVLDRLKPVIGVNTDPERSEGHLCLPVRYTHSFPEALQKFYRGEFRWLWRQRIR 60
           MLLAASKVLDRLKPVIGVNTDPERSEGHLCLPVRYTHSFPEALQKFYRGEFRWLWRQRIR
Sbjct: 1   MLLAASKVLDRLKPVIGVNTDPERSEGHLCLPVRYTHSFPEALQKFYRGEFRWLWRQRIR 60

Query: 61  LYLEGTGINPVPVDLHEQQLSLNQHNRALNIERAHDERSEASGPQLLPVRALNEVFIGES 120
           LYLEGTGINPVPVDLHEQQLSLNQHNRALNIERAHDERSEASGPQLLPVRALNEVFIGES
Sbjct: 61  LYLEGTGINPVPVDLHEQQLSLNQHNRALNIERAHDERSEASGPQLLPVRALNEVFIGES 120

Query: 121 LSSRASYYEISVDDGPWEKQKSSGLNLCTGTGSKAWSFNINRVATQAVEDVLNIAKRQGN 180
           LSSRASYYEISVDDGPWEKQKSSGLNLCTGTGSKAWSFNINRVATQAVEDVLNIAKRQGN
Sbjct: 121 LSSRASYYEISVDDGPWEKQKSSGLNLCTGTGSKAWSFNINRVATQAVEDVLNIAKRQGN 180

Query: 181 LSLPLNRELVEKVTNEYNESLLYSPEEPKILFSIREPIANRVFSSSRQRCFSSKVCVRSR 240
           LSLPLNRELVEKVTNEYNESLLYSPEEPKILFSIREPIANRVFSSSRQRCFSSKVCVRSR
Sbjct: 181 LSLPLNRELVEKVTNEYNESLLYSPEEPKILFSIREPIANRVFSSSRQRCFSSKVCVRSR 240

Query: 241 CWDACMVVDGGTSFEFNDGAIASMMINKEDELRTVLLEQ 279
           CWDACMVVDGGTSFEFNDGAIASMMINKEDELRTVLLEQ
Sbjct: 241 CWDACMVVDGGTSFEFNDGAIASMMINKEDELRTVLLEQ 279


>gi|4506501 regulatory factor X-associated protein [Homo sapiens]
          Length = 272

 Score = 35.0 bits (79), Expect = 0.073
 Identities = 27/95 (28%), Positives = 49/95 (51%), Gaps = 4/95 (4%)

Query: 137 WEKQKSSGLNLCTGTGSKAWSFNINRVATQAVEDVLNIAK-RQGNLS-LPLNRELVEKVT 194
           ++K+KS     C GT S   + N+     ++ +++L+I K R G+    P    L+E+V 
Sbjct: 174 YKKKKSDQALNCGGTASTGSAGNVK--LEESADNILSIVKQRTGSFGDRPARPTLLEQVL 231

Query: 195 NEYNESLLYSPEEPKILFSIREPIANRVFSSSRQR 229
           N+   SLL SPE  + L   ++ +  +V    +Q+
Sbjct: 232 NQKRLSLLRSPEVVQFLQKQQQLLNQQVLEQRQQQ 266


>gi|4826908 phosphoinositide-3-kinase, regulatory subunit 2 (beta)
           [Homo sapiens]
          Length = 728

 Score = 31.6 bits (70), Expect = 0.80
 Identities = 15/30 (50%), Positives = 17/30 (56%)

Query: 75  LHEQQLSLNQHNRALNIERAHDERSEASGP 104
           LH Q  SL QHN AL +  AH  R+   GP
Sbjct: 694 LHYQHASLVQHNDALTVTLAHPVRAPGPGP 723


>gi|187475373 c-src tyrosine kinase [Homo sapiens]
          Length = 450

 Score = 28.5 bits (62), Expect = 6.8
 Identities = 24/79 (30%), Positives = 32/79 (40%), Gaps = 5/79 (6%)

Query: 141 KSSGLNLCTGTGSKAWSFNINRVATQAVEDVLNIAKRQG---NLSLPLNRELVEKVTNEY 197
           K   L +   T    W    N+V  + +     + KR+G      L L      K+T E 
Sbjct: 32  KGDVLTIVAVTKDPNWYKAKNKVGREGIIPANYVQKREGVKAGTKLSLMPWFHGKITREQ 91

Query: 198 NESLLYSPEEPKILFSIRE 216
            E LLY PE    LF +RE
Sbjct: 92  AERLLYPPETG--LFLVRE 108


>gi|4758078 c-src tyrosine kinase [Homo sapiens]
          Length = 450

 Score = 28.5 bits (62), Expect = 6.8
 Identities = 24/79 (30%), Positives = 32/79 (40%), Gaps = 5/79 (6%)

Query: 141 KSSGLNLCTGTGSKAWSFNINRVATQAVEDVLNIAKRQG---NLSLPLNRELVEKVTNEY 197
           K   L +   T    W    N+V  + +     + KR+G      L L      K+T E 
Sbjct: 32  KGDVLTIVAVTKDPNWYKAKNKVGREGIIPANYVQKREGVKAGTKLSLMPWFHGKITREQ 91

Query: 198 NESLLYSPEEPKILFSIRE 216
            E LLY PE    LF +RE
Sbjct: 92  AERLLYPPETG--LFLVRE 108


>gi|12667788 myosin, heavy polypeptide 9, non-muscle [Homo sapiens]
          Length = 1960

 Score = 28.1 bits (61), Expect = 8.9
 Identities = 17/58 (29%), Positives = 31/58 (53%)

Query: 75   LHEQQLSLNQHNRALNIERAHDERSEASGPQLLPVRALNEVFIGESLSSRASYYEISV 132
            L +  L ++Q N  LN+ER+H +++E +  QL       +V + E   +  S Y+ S+
Sbjct: 1752 LKKANLQIDQINTDLNLERSHAQKNENARQQLERQNKELKVKLQEMEGTVKSKYKASI 1809


>gi|239756943 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 783

 Score = 28.1 bits (61), Expect = 8.9
 Identities = 14/58 (24%), Positives = 31/58 (53%), Gaps = 5/58 (8%)

Query: 84  QHNRALNIERAHDERSEASGPQLLPVRALNEVFIGESLSSRASYYEISVDDGPWEKQK 141
           +H R  N   +H  + +A  P     RA+ +V +    +  A+ +++++  GPWE+++
Sbjct: 415 EHKRGDNARPSHGLQDDAPRP-----RAVTQVVVQGVEALAAAGWDMALGPGPWEQEE 467


>gi|239751443 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 783

 Score = 28.1 bits (61), Expect = 8.9
 Identities = 14/58 (24%), Positives = 31/58 (53%), Gaps = 5/58 (8%)

Query: 84  QHNRALNIERAHDERSEASGPQLLPVRALNEVFIGESLSSRASYYEISVDDGPWEKQK 141
           +H R  N   +H  + +A  P     RA+ +V +    +  A+ +++++  GPWE+++
Sbjct: 415 EHKRGDNARPSHGLQDDAPRP-----RAVTQVVVQGVEALAAAGWDMALGPGPWEQEE 467


>gi|239745948 PREDICTED: hypothetical protein XP_002343622 [Homo
           sapiens]
          Length = 791

 Score = 28.1 bits (61), Expect = 8.9
 Identities = 14/58 (24%), Positives = 31/58 (53%), Gaps = 5/58 (8%)

Query: 84  QHNRALNIERAHDERSEASGPQLLPVRALNEVFIGESLSSRASYYEISVDDGPWEKQK 141
           +H R  N   +H  + +A  P     RA+ +V +    +  A+ +++++  GPWE+++
Sbjct: 423 EHKRGDNARPSHGLQDDAPRP-----RAVTQVVVQGVEALAAAGWDMALGPGPWEQEE 475


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.318    0.133    0.396 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,340,690
Number of Sequences: 37866
Number of extensions: 445700
Number of successful extensions: 1035
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 1030
Number of HSP's gapped (non-prelim): 11
length of query: 279
length of database: 18,247,518
effective HSP length: 101
effective length of query: 178
effective length of database: 14,423,052
effective search space: 2567303256
effective search space used: 2567303256
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.