Search of human proteins with 231567183

Search of human proteins with 231567183

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|231567183 acyl-CoA thioesterase 13 isoform 2 [Homo sapiens]
         (117 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|231567183 acyl-CoA thioesterase 13 isoform 2 [Homo sapiens]        232   5e-62
gi|8923812 acyl-CoA thioesterase 13 isoform 1 [Homo sapiens]          226   2e-60
gi|76159293 thioesterase superfamily member 4 [Homo sapiens]           31   0.18 
gi|22165400 thioesterase, adipose associated isoform BFIT2 [Homo...    28   1.6  
gi|22165355 thioesterase, adipose associated isoform BFIT1 [Homo...    28   1.6  
gi|31711992 dihydrolipoamide S-acetyltransferase [Homo sapiens]        27   4.5  
gi|169168202 PREDICTED: hypothetical protein [Homo sapiens]            26   7.7  
gi|169167967 PREDICTED: hypothetical protein [Homo sapiens]            26   7.7  
gi|169167681 PREDICTED: hypothetical protein [Homo sapiens]            26   7.7  

>gi|231567183 acyl-CoA thioesterase 13 isoform 2 [Homo sapiens]
          Length = 117

 Score =  232 bits (591), Expect = 5e-62
 Identities = 117/117 (100%), Positives = 117/117 (100%)

Query: 1   MVRKITLVSAAPGKVICEMKVEEEHTNAIGTLHGGLTATLVDNISTMALLCTERGAPGVS 60
           MVRKITLVSAAPGKVICEMKVEEEHTNAIGTLHGGLTATLVDNISTMALLCTERGAPGVS
Sbjct: 1   MVRKITLVSAAPGKVICEMKVEEEHTNAIGTLHGGLTATLVDNISTMALLCTERGAPGVS 60

Query: 61  VDMNITYMSPAKLGEDIVITAHVLKQGKTLAFTSVDLTNKATGKLIAQGRHTKHLGN 117
           VDMNITYMSPAKLGEDIVITAHVLKQGKTLAFTSVDLTNKATGKLIAQGRHTKHLGN
Sbjct: 61  VDMNITYMSPAKLGEDIVITAHVLKQGKTLAFTSVDLTNKATGKLIAQGRHTKHLGN 117


>gi|8923812 acyl-CoA thioesterase 13 isoform 1 [Homo sapiens]
          Length = 140

 Score =  226 bits (577), Expect = 2e-60
 Identities = 114/114 (100%), Positives = 114/114 (100%)

Query: 4   KITLVSAAPGKVICEMKVEEEHTNAIGTLHGGLTATLVDNISTMALLCTERGAPGVSVDM 63
           KITLVSAAPGKVICEMKVEEEHTNAIGTLHGGLTATLVDNISTMALLCTERGAPGVSVDM
Sbjct: 27  KITLVSAAPGKVICEMKVEEEHTNAIGTLHGGLTATLVDNISTMALLCTERGAPGVSVDM 86

Query: 64  NITYMSPAKLGEDIVITAHVLKQGKTLAFTSVDLTNKATGKLIAQGRHTKHLGN 117
           NITYMSPAKLGEDIVITAHVLKQGKTLAFTSVDLTNKATGKLIAQGRHTKHLGN
Sbjct: 87  NITYMSPAKLGEDIVITAHVLKQGKTLAFTSVDLTNKATGKLIAQGRHTKHLGN 140


>gi|76159293 thioesterase superfamily member 4 [Homo sapiens]
          Length = 240

 Score = 31.2 bits (69), Expect = 0.18
 Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 2/56 (3%)

Query: 30  GTLHGGLTATLVDNISTMALLCTERGAPGVSVDMNITYMSPAKLGEDIVITAHVLK 85
           G +HGG  AT++D  +T+ +     G   ++ ++NI Y  P  L   ++I + + K
Sbjct: 149 GFIHGGAIATMID--ATVGMCAMMAGGIVMTANLNINYKRPIPLCSVVMINSQLDK 202


>gi|22165400 thioesterase, adipose associated isoform BFIT2 [Homo
           sapiens]
          Length = 594

 Score = 28.1 bits (61), Expect = 1.6
 Identities = 15/59 (25%), Positives = 28/59 (47%)

Query: 25  HTNAIGTLHGGLTATLVDNISTMALLCTERGAPGVSVDMNITYMSPAKLGEDIVITAHV 83
           H N  G   GG     ++N++T+A     R  P +       +  P+++G+ +V+ A V
Sbjct: 230 HANHQGNTFGGQIMAWMENVATIAASRLCRAHPTLKAIEMFHFRGPSQVGDRLVLKAIV 288


>gi|22165355 thioesterase, adipose associated isoform BFIT1 [Homo
           sapiens]
          Length = 607

 Score = 28.1 bits (61), Expect = 1.6
 Identities = 15/59 (25%), Positives = 28/59 (47%)

Query: 25  HTNAIGTLHGGLTATLVDNISTMALLCTERGAPGVSVDMNITYMSPAKLGEDIVITAHV 83
           H N  G   GG     ++N++T+A     R  P +       +  P+++G+ +V+ A V
Sbjct: 230 HANHQGNTFGGQIMAWMENVATIAASRLCRAHPTLKAIEMFHFRGPSQVGDRLVLKAIV 288


>gi|31711992 dihydrolipoamide S-acetyltransferase [Homo sapiens]
          Length = 647

 Score = 26.6 bits (57), Expect = 4.5
 Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 2/46 (4%)

Query: 61  VDMNITYMSPAKLGEDIVITAHVLKQGKTLAFTSVDLTNKA-TGKL 105
           VD+++   +PA L   IV  AH+ K  +T+A   V L  KA  GKL
Sbjct: 509 VDVSVAVSTPAGLITPIVFNAHI-KGVETIANDVVSLATKAREGKL 553


>gi|169168202 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 460

 Score = 25.8 bits (55), Expect = 7.7
 Identities = 13/39 (33%), Positives = 20/39 (51%)

Query: 53  ERGAPGVSVDMNITYMSPAKLGEDIVITAHVLKQGKTLA 91
           ERG+PG      ++  SP    + +++T  V   GKT A
Sbjct: 120 ERGSPGAGDVNPVSASSPPGRPDPLLLTTFVFPPGKTSA 158


>gi|169167967 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 460

 Score = 25.8 bits (55), Expect = 7.7
 Identities = 13/39 (33%), Positives = 20/39 (51%)

Query: 53  ERGAPGVSVDMNITYMSPAKLGEDIVITAHVLKQGKTLA 91
           ERG+PG      ++  SP    + +++T  V   GKT A
Sbjct: 120 ERGSPGAGDVNPVSASSPPGRPDPLLLTTFVFPPGKTSA 158


>gi|169167681 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 460

 Score = 25.8 bits (55), Expect = 7.7
 Identities = 13/39 (33%), Positives = 20/39 (51%)

Query: 53  ERGAPGVSVDMNITYMSPAKLGEDIVITAHVLKQGKTLA 91
           ERG+PG      ++  SP    + +++T  V   GKT A
Sbjct: 120 ERGSPGAGDVNPVSASSPPGRPDPLLLTTFVFPPGKTSA 158


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.316    0.131    0.367 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,103,598
Number of Sequences: 37866
Number of extensions: 139073
Number of successful extensions: 235
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 228
Number of HSP's gapped (non-prelim): 9
length of query: 117
length of database: 18,247,518
effective HSP length: 87
effective length of query: 30
effective length of database: 14,953,176
effective search space: 448595280
effective search space used: 448595280
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.