Search of human proteins with 22547149

Search of human proteins with 22547149

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|22547149 F-box only protein 22 isoform a [Homo sapiens]
         (403 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|22547149 F-box only protein 22 isoform a [Homo sapiens]            810   0.0  
gi|13443000 F-box only protein 22 isoform b [Homo sapiens]            532   e-151
gi|4758786 NADH dehydrogenase (ubiquinone) Fe-S protein 2 [Homo ...    35   0.16 
gi|42558258 F-box protein 33 [Homo sapiens]                            34   0.21 
gi|239750277 PREDICTED: hypothetical protein XP_002347351 [Homo ...    31   2.3  
gi|239744587 PREDICTED: hypothetical protein XP_002343203 [Homo ...    31   2.3  
gi|4502477 beta-transducin repeat containing protein isoform 2 [...    30   5.1  
gi|16117783 beta-transducin repeat containing protein isoform 1 ...    30   5.1  
gi|30795117 F-box only protein, helicase, 18 isoform 1 [Homo sap...    29   8.6  
gi|30795119 F-box only protein, helicase, 18 isoform 2 [Homo sap...    29   8.6  
gi|90991712 CD207 antigen, langerin [Homo sapiens]                     29   8.6  

>gi|22547149 F-box only protein 22 isoform a [Homo sapiens]
          Length = 403

 Score =  810 bits (2091), Expect = 0.0
 Identities = 403/403 (100%), Positives = 403/403 (100%)

Query: 1   MEPVGCCGECRGSSVDPRSTFVLSNLAEVVERVLTFLPAKALLRVACVCRLWRECVRRVL 60
           MEPVGCCGECRGSSVDPRSTFVLSNLAEVVERVLTFLPAKALLRVACVCRLWRECVRRVL
Sbjct: 1   MEPVGCCGECRGSSVDPRSTFVLSNLAEVVERVLTFLPAKALLRVACVCRLWRECVRRVL 60

Query: 61  RTHRSVTWISAGLAEAGHLEGHCLVRVVAEELENVRILPHTVLYMADSETFISLEECRGH 120
           RTHRSVTWISAGLAEAGHLEGHCLVRVVAEELENVRILPHTVLYMADSETFISLEECRGH
Sbjct: 61  RTHRSVTWISAGLAEAGHLEGHCLVRVVAEELENVRILPHTVLYMADSETFISLEECRGH 120

Query: 121 KRARKRTSMETALALEKLFPKQCQVLGIVTPGIVVTPMGSGSNRPQEIEIGESGFALLFP 180
           KRARKRTSMETALALEKLFPKQCQVLGIVTPGIVVTPMGSGSNRPQEIEIGESGFALLFP
Sbjct: 121 KRARKRTSMETALALEKLFPKQCQVLGIVTPGIVVTPMGSGSNRPQEIEIGESGFALLFP 180

Query: 181 QIEGIKIQPFHFIKDPKNLTLERHQLTEVGLLDNPELRVVLVFGYNCCKVGASNYLQQVV 240
           QIEGIKIQPFHFIKDPKNLTLERHQLTEVGLLDNPELRVVLVFGYNCCKVGASNYLQQVV
Sbjct: 181 QIEGIKIQPFHFIKDPKNLTLERHQLTEVGLLDNPELRVVLVFGYNCCKVGASNYLQQVV 240

Query: 241 STFSDMNIILAGGQVDNLSSLTSEKNPLDIDASGVVGLSFSGHRIQSATVLLNEDVSDEK 300
           STFSDMNIILAGGQVDNLSSLTSEKNPLDIDASGVVGLSFSGHRIQSATVLLNEDVSDEK
Sbjct: 241 STFSDMNIILAGGQVDNLSSLTSEKNPLDIDASGVVGLSFSGHRIQSATVLLNEDVSDEK 300

Query: 301 TAEAAMQRLKAANIPEHNTIGFMFACVGRGFQYYRAKGNVEADAFRKFFPSVPLFGFFGN 360
           TAEAAMQRLKAANIPEHNTIGFMFACVGRGFQYYRAKGNVEADAFRKFFPSVPLFGFFGN
Sbjct: 301 TAEAAMQRLKAANIPEHNTIGFMFACVGRGFQYYRAKGNVEADAFRKFFPSVPLFGFFGN 360

Query: 361 GEIGCDRIVTGNFILRKCNEVKDDDLFHSYTTIMALIHLGSSK 403
           GEIGCDRIVTGNFILRKCNEVKDDDLFHSYTTIMALIHLGSSK
Sbjct: 361 GEIGCDRIVTGNFILRKCNEVKDDDLFHSYTTIMALIHLGSSK 403


>gi|13443000 F-box only protein 22 isoform b [Homo sapiens]
          Length = 276

 Score =  532 bits (1370), Expect = e-151
 Identities = 265/265 (100%), Positives = 265/265 (100%)

Query: 1   MEPVGCCGECRGSSVDPRSTFVLSNLAEVVERVLTFLPAKALLRVACVCRLWRECVRRVL 60
           MEPVGCCGECRGSSVDPRSTFVLSNLAEVVERVLTFLPAKALLRVACVCRLWRECVRRVL
Sbjct: 1   MEPVGCCGECRGSSVDPRSTFVLSNLAEVVERVLTFLPAKALLRVACVCRLWRECVRRVL 60

Query: 61  RTHRSVTWISAGLAEAGHLEGHCLVRVVAEELENVRILPHTVLYMADSETFISLEECRGH 120
           RTHRSVTWISAGLAEAGHLEGHCLVRVVAEELENVRILPHTVLYMADSETFISLEECRGH
Sbjct: 61  RTHRSVTWISAGLAEAGHLEGHCLVRVVAEELENVRILPHTVLYMADSETFISLEECRGH 120

Query: 121 KRARKRTSMETALALEKLFPKQCQVLGIVTPGIVVTPMGSGSNRPQEIEIGESGFALLFP 180
           KRARKRTSMETALALEKLFPKQCQVLGIVTPGIVVTPMGSGSNRPQEIEIGESGFALLFP
Sbjct: 121 KRARKRTSMETALALEKLFPKQCQVLGIVTPGIVVTPMGSGSNRPQEIEIGESGFALLFP 180

Query: 181 QIEGIKIQPFHFIKDPKNLTLERHQLTEVGLLDNPELRVVLVFGYNCCKVGASNYLQQVV 240
           QIEGIKIQPFHFIKDPKNLTLERHQLTEVGLLDNPELRVVLVFGYNCCKVGASNYLQQVV
Sbjct: 181 QIEGIKIQPFHFIKDPKNLTLERHQLTEVGLLDNPELRVVLVFGYNCCKVGASNYLQQVV 240

Query: 241 STFSDMNIILAGGQVDNLSSLTSEK 265
           STFSDMNIILAGGQVDNLSSLTSEK
Sbjct: 241 STFSDMNIILAGGQVDNLSSLTSEK 265


>gi|4758786 NADH dehydrogenase (ubiquinone) Fe-S protein 2 [Homo
           sapiens]
          Length = 463

 Score = 34.7 bits (78), Expect = 0.16
 Identities = 29/99 (29%), Positives = 44/99 (44%), Gaps = 8/99 (8%)

Query: 88  VAEELENVRILPHTVLYMADSETFISLEECRGHKRARKRTSMETALALEKLFPKQCQVLG 147
           V E  +++RI+   +  M   E  +   +    KRA  +TSME+ +   KL+ +  QV  
Sbjct: 334 VEEMRQSLRIIAQCLNKMPPGEIKVDDAKVSPPKRAEMKTSMESLIHHFKLYTEGYQVPP 393

Query: 148 IVTPGIVVTPMG--------SGSNRPQEIEIGESGFALL 178
             T   +  P G         GS+RP   +I   GFA L
Sbjct: 394 GATYTAIEAPKGEFGVYLVSDGSSRPYRCKIKAPGFAHL 432


>gi|42558258 F-box protein 33 [Homo sapiens]
          Length = 555

 Score = 34.3 bits (77), Expect = 0.21
 Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 9/50 (18%)

Query: 7   CGECRGSSVDPRSTFVLSNLAEVVERVLTFLPAKALLRVACVCRLWRECV 56
           CG+  G++  P         +E++  + +FLPA   LR +  C  WREC+
Sbjct: 62  CGQAAGAASLP---------SELIVHIFSFLPAPDRLRASASCSHWRECL 102


>gi|239750277 PREDICTED: hypothetical protein XP_002347351 [Homo
            sapiens]
          Length = 2134

 Score = 30.8 bits (68), Expect = 2.3
 Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 3/61 (4%)

Query: 220  VLVFGYNCCKVGASNYLQQVVSTFSDMNIILAGGQVDNLSSLTSEKNPLDIDASGV--VG 277
            +L     CC+ G +   ++++  F D NI+L  G+V  + S  S+K  L+ +A  +  VG
Sbjct: 1357 ILTESVPCCEDGLT-CSRKIIVAFQDQNIVLQDGKVTAVKSTESKKCELNANAYSIHTVG 1415

Query: 278  L 278
            L
Sbjct: 1416 L 1416


>gi|239744587 PREDICTED: hypothetical protein XP_002343203 [Homo
            sapiens]
          Length = 2134

 Score = 30.8 bits (68), Expect = 2.3
 Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 3/61 (4%)

Query: 220  VLVFGYNCCKVGASNYLQQVVSTFSDMNIILAGGQVDNLSSLTSEKNPLDIDASGV--VG 277
            +L     CC+ G +   ++++  F D NI+L  G+V  + S  S+K  L+ +A  +  VG
Sbjct: 1357 ILTESVPCCEDGLT-CSRKIIVAFQDQNIVLQDGKVTAVKSTESKKCELNANAYSIHTVG 1415

Query: 278  L 278
            L
Sbjct: 1416 L 1416


>gi|4502477 beta-transducin repeat containing protein isoform 2
           [Homo sapiens]
          Length = 569

 Score = 29.6 bits (65), Expect = 5.1
 Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 10/47 (21%)

Query: 26  LAEVVERVLTFLPAKALLRVACVCR----------LWRECVRRVLRT 62
           L  + E +L++L AK+L     VC+          LW++ + R++RT
Sbjct: 153 LDHIAENILSYLDAKSLCAAELVCKEWYRVTSDGMLWKKLIERMVRT 199


>gi|16117783 beta-transducin repeat containing protein isoform 1
           [Homo sapiens]
          Length = 605

 Score = 29.6 bits (65), Expect = 5.1
 Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 10/47 (21%)

Query: 26  LAEVVERVLTFLPAKALLRVACVCR----------LWRECVRRVLRT 62
           L  + E +L++L AK+L     VC+          LW++ + R++RT
Sbjct: 189 LDHIAENILSYLDAKSLCAAELVCKEWYRVTSDGMLWKKLIERMVRT 235


>gi|30795117 F-box only protein, helicase, 18 isoform 1 [Homo
           sapiens]
          Length = 1094

 Score = 28.9 bits (63), Expect = 8.6
 Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%)

Query: 27  AEVVERVLTFLPAKALL-RVACVCRLWRECV 56
           +EV+  V  FLP + L   ++ VC LWRE +
Sbjct: 268 SEVLRHVFAFLPVEDLYWNLSLVCHLWREII 298


>gi|30795119 F-box only protein, helicase, 18 isoform 2 [Homo
           sapiens]
          Length = 1043

 Score = 28.9 bits (63), Expect = 8.6
 Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%)

Query: 27  AEVVERVLTFLPAKALL-RVACVCRLWRECV 56
           +EV+  V  FLP + L   ++ VC LWRE +
Sbjct: 217 SEVLRHVFAFLPVEDLYWNLSLVCHLWREII 247


>gi|90991712 CD207 antigen, langerin [Homo sapiens]
          Length = 328

 Score = 28.9 bits (63), Expect = 8.6
 Identities = 18/40 (45%), Positives = 27/40 (67%), Gaps = 4/40 (10%)

Query: 240 VSTFSDM--NIILAGGQVDNLSSLTSE--KNPLDIDASGV 275
           + T SD+  N+ L  G+VDN+S+L SE  KN   ++A+GV
Sbjct: 68  MGTISDVKTNVQLLKGRVDNISTLDSEIKKNSDGMEAAGV 107


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.323    0.138    0.414 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,757,729
Number of Sequences: 37866
Number of extensions: 623545
Number of successful extensions: 1164
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 1159
Number of HSP's gapped (non-prelim): 13
length of query: 403
length of database: 18,247,518
effective HSP length: 105
effective length of query: 298
effective length of database: 14,271,588
effective search space: 4252933224
effective search space used: 4252933224
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.