Guide to the Human Genome
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Name: ZNF117 Sequence: fasta or formatted (483aa) NCBI GI: 115270953
Description:

zinc finger protein 117

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.5         17           1
 C cysteine            6.8         33           1
 D aspartate           0.8          4           1
 E glutamate           9.1         44           2
 F phenylalanine       4.3         21           1
 G glycine             5.8         28           1
 H histidine           7.5         36           1
 I isoleucine          4.6         22           2
 K lysine             14.7         71           2
 L leucine             5.6         27           1
 M methionine          1.0          5           1
 N asparagine          5.0         24           1
 P proline             1.9          9           1
 Q glutamine           3.7         18           1
 R arginine            4.8         23           2
 S serine              6.4         31           2
 T threonine           7.7         37           2
 V valine              2.3         11           2
 W tryptophan          0.4          2           1
 Y tyrosine            4.1         20           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 117 
ZNF85                 0.715   zinc finger protein 85 
ZNF492                0.694   zinc finger protein 492 
ZNF98                 0.692   zinc finger protein 98 
ZNF107                0.684   zinc finger protein 107 
ZNF107                0.684   zinc finger protein 107 
ZNF675                0.682   zinc finger protein 675 
ZNF737                0.671   PREDICTED: zinc finger protein 737 
ZNF737                0.671   PREDICTED: zinc finger protein 737 
ZNF737                0.671   PREDICTED: zinc finger protein 737 
ZNF208                0.666   zinc finger protein 208 
ZNF431                0.665   zinc finger protein 431 
ZNF676                0.661   zinc finger protein 676 
ZNF93                 0.660   zinc finger protein 93 
ZNF726                0.658   PREDICTED: zinc finger protein 726 
ZNF726                0.658   PREDICTED: zinc finger protein 726 
ZNF726                0.658   PREDICTED: zinc finger protein 726 
ZNF708                0.658   zinc finger protein 708 
LOC730110             0.654   PREDICTED: Zinc finger protein ENSP00000351689 [Hom...
ZNF43                 0.653   zinc finger protein 43 
ZNF429                0.653   zinc finger protein 429 
ZNF681                0.653   zinc finger protein 681 
LOC730110             0.652   PREDICTED: Zinc finger protein ENSP00000351689 [Hom...
LOC730110             0.652   PREDICTED: Zinc finger protein ENSP00000351689 [Hom...
ZNF254                0.652   zinc finger protein 254 
ZNF737                0.651   zinc finger protein 737 
ZNF92                 0.651   zinc finger protein 92 isoform 2 
ZNF257                0.651   zinc finger protein 257 
ZNF728                0.650   PREDICTED: zinc finger protein 728 
ZNF728                0.650   PREDICTED: zinc finger protein 728 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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