Search of human proteins with 217416358

Search of human proteins with 217416358

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|217416358 G protein-coupled receptor 175 isoform 1 [Homo
sapiens]
         (373 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|209862909 G protein-coupled receptor 175 isoform 1 [Homo sapi...   736   0.0  
gi|217416358 G protein-coupled receptor 175 isoform 1 [Homo sapi...   736   0.0  
gi|217416360 G protein-coupled receptor 175 isoform 2 [Homo sapi...   399   e-111
gi|134288906 tripartite motif-containing 67 [Homo sapiens]             33   0.41 
gi|118498359 ribosomal L1 domain containing 1 [Homo sapiens]           32   0.92 
gi|5901884 cytochrome b-561 domain containing 2 [Homo sapiens]         30   4.6  
gi|169218204 PREDICTED: similar to pre-B lymphocyte gene 1 [Homo...    29   6.0  
gi|8923370 CKLF-like MARVEL transmembrane domain containing 6 [H...    29   7.8  

>gi|209862909 G protein-coupled receptor 175 isoform 1 [Homo
           sapiens]
          Length = 373

 Score =  736 bits (1899), Expect = 0.0
 Identities = 373/373 (100%), Positives = 373/373 (100%)

Query: 1   MDTLEEVTWANGSTALPPPLAPNISVPHRCLLLLYEDIGTSRVRYWDLLLLIPNVLFLIF 60
           MDTLEEVTWANGSTALPPPLAPNISVPHRCLLLLYEDIGTSRVRYWDLLLLIPNVLFLIF
Sbjct: 1   MDTLEEVTWANGSTALPPPLAPNISVPHRCLLLLYEDIGTSRVRYWDLLLLIPNVLFLIF 60

Query: 61  LLWKLPSARAKIRITSSPIFITFYILVFVVALVGIARAVVSMTVSTSNAATVADKILWEI 120
           LLWKLPSARAKIRITSSPIFITFYILVFVVALVGIARAVVSMTVSTSNAATVADKILWEI
Sbjct: 61  LLWKLPSARAKIRITSSPIFITFYILVFVVALVGIARAVVSMTVSTSNAATVADKILWEI 120

Query: 121 TRFFLLAIELSVIILGLAFGHLESKSSIKRVLAITTVLSLAYSVTQGTLEILYPDAHLSA 180
           TRFFLLAIELSVIILGLAFGHLESKSSIKRVLAITTVLSLAYSVTQGTLEILYPDAHLSA
Sbjct: 121 TRFFLLAIELSVIILGLAFGHLESKSSIKRVLAITTVLSLAYSVTQGTLEILYPDAHLSA 180

Query: 181 EDFNIYGHGGRQFWLVSSCFFFLVYSLVVILPKTPLKERISLPSRRSFYVYAGILALLNL 240
           EDFNIYGHGGRQFWLVSSCFFFLVYSLVVILPKTPLKERISLPSRRSFYVYAGILALLNL
Sbjct: 181 EDFNIYGHGGRQFWLVSSCFFFLVYSLVVILPKTPLKERISLPSRRSFYVYAGILALLNL 240

Query: 241 LQGLGSVLLCFDIIEGLCCVDATTFLYFSFFAPLIYVAFLRGFFGSEPKILFSYKCQVDE 300
           LQGLGSVLLCFDIIEGLCCVDATTFLYFSFFAPLIYVAFLRGFFGSEPKILFSYKCQVDE
Sbjct: 241 LQGLGSVLLCFDIIEGLCCVDATTFLYFSFFAPLIYVAFLRGFFGSEPKILFSYKCQVDE 300

Query: 301 TEEPDVHLPQPYAVARREGLEAAGAAGASAASYSSTQFDSAGGVAYLDDIASMPCHTGSI 360
           TEEPDVHLPQPYAVARREGLEAAGAAGASAASYSSTQFDSAGGVAYLDDIASMPCHTGSI
Sbjct: 301 TEEPDVHLPQPYAVARREGLEAAGAAGASAASYSSTQFDSAGGVAYLDDIASMPCHTGSI 360

Query: 361 NSTDSERWKAINA 373
           NSTDSERWKAINA
Sbjct: 361 NSTDSERWKAINA 373


>gi|217416358 G protein-coupled receptor 175 isoform 1 [Homo
           sapiens]
          Length = 373

 Score =  736 bits (1899), Expect = 0.0
 Identities = 373/373 (100%), Positives = 373/373 (100%)

Query: 1   MDTLEEVTWANGSTALPPPLAPNISVPHRCLLLLYEDIGTSRVRYWDLLLLIPNVLFLIF 60
           MDTLEEVTWANGSTALPPPLAPNISVPHRCLLLLYEDIGTSRVRYWDLLLLIPNVLFLIF
Sbjct: 1   MDTLEEVTWANGSTALPPPLAPNISVPHRCLLLLYEDIGTSRVRYWDLLLLIPNVLFLIF 60

Query: 61  LLWKLPSARAKIRITSSPIFITFYILVFVVALVGIARAVVSMTVSTSNAATVADKILWEI 120
           LLWKLPSARAKIRITSSPIFITFYILVFVVALVGIARAVVSMTVSTSNAATVADKILWEI
Sbjct: 61  LLWKLPSARAKIRITSSPIFITFYILVFVVALVGIARAVVSMTVSTSNAATVADKILWEI 120

Query: 121 TRFFLLAIELSVIILGLAFGHLESKSSIKRVLAITTVLSLAYSVTQGTLEILYPDAHLSA 180
           TRFFLLAIELSVIILGLAFGHLESKSSIKRVLAITTVLSLAYSVTQGTLEILYPDAHLSA
Sbjct: 121 TRFFLLAIELSVIILGLAFGHLESKSSIKRVLAITTVLSLAYSVTQGTLEILYPDAHLSA 180

Query: 181 EDFNIYGHGGRQFWLVSSCFFFLVYSLVVILPKTPLKERISLPSRRSFYVYAGILALLNL 240
           EDFNIYGHGGRQFWLVSSCFFFLVYSLVVILPKTPLKERISLPSRRSFYVYAGILALLNL
Sbjct: 181 EDFNIYGHGGRQFWLVSSCFFFLVYSLVVILPKTPLKERISLPSRRSFYVYAGILALLNL 240

Query: 241 LQGLGSVLLCFDIIEGLCCVDATTFLYFSFFAPLIYVAFLRGFFGSEPKILFSYKCQVDE 300
           LQGLGSVLLCFDIIEGLCCVDATTFLYFSFFAPLIYVAFLRGFFGSEPKILFSYKCQVDE
Sbjct: 241 LQGLGSVLLCFDIIEGLCCVDATTFLYFSFFAPLIYVAFLRGFFGSEPKILFSYKCQVDE 300

Query: 301 TEEPDVHLPQPYAVARREGLEAAGAAGASAASYSSTQFDSAGGVAYLDDIASMPCHTGSI 360
           TEEPDVHLPQPYAVARREGLEAAGAAGASAASYSSTQFDSAGGVAYLDDIASMPCHTGSI
Sbjct: 301 TEEPDVHLPQPYAVARREGLEAAGAAGASAASYSSTQFDSAGGVAYLDDIASMPCHTGSI 360

Query: 361 NSTDSERWKAINA 373
           NSTDSERWKAINA
Sbjct: 361 NSTDSERWKAINA 373


>gi|217416360 G protein-coupled receptor 175 isoform 2 [Homo
           sapiens]
          Length = 293

 Score =  399 bits (1025), Expect = e-111
 Identities = 203/204 (99%), Positives = 204/204 (100%)

Query: 1   MDTLEEVTWANGSTALPPPLAPNISVPHRCLLLLYEDIGTSRVRYWDLLLLIPNVLFLIF 60
           MDTLEEVTWANGSTALPPPLAPNISVPHRCLLLLYEDIGTSRVRYWDLLLLIPNVLFLIF
Sbjct: 1   MDTLEEVTWANGSTALPPPLAPNISVPHRCLLLLYEDIGTSRVRYWDLLLLIPNVLFLIF 60

Query: 61  LLWKLPSARAKIRITSSPIFITFYILVFVVALVGIARAVVSMTVSTSNAATVADKILWEI 120
           LLWKLPSARAKIRITSSPIFITFYILVFVVALVGIARAVVSMTVSTSNAATVADKILWEI
Sbjct: 61  LLWKLPSARAKIRITSSPIFITFYILVFVVALVGIARAVVSMTVSTSNAATVADKILWEI 120

Query: 121 TRFFLLAIELSVIILGLAFGHLESKSSIKRVLAITTVLSLAYSVTQGTLEILYPDAHLSA 180
           TRFFLLAIELSVIILGLAFGHLESKSSIKRVLAITTVLSLAYSVTQGTLEILYPDAHLSA
Sbjct: 121 TRFFLLAIELSVIILGLAFGHLESKSSIKRVLAITTVLSLAYSVTQGTLEILYPDAHLSA 180

Query: 181 EDFNIYGHGGRQFWLVSSCFFFLV 204
           EDFNIYGHGGRQFWLVSSCFFFL+
Sbjct: 181 EDFNIYGHGGRQFWLVSSCFFFLL 204


>gi|134288906 tripartite motif-containing 67 [Homo sapiens]
          Length = 783

 Score = 33.1 bits (74), Expect = 0.41
 Identities = 16/44 (36%), Positives = 27/44 (61%), Gaps = 1/44 (2%)

Query: 300 ETEEPDVHLPQPYAVARREGLEAAGAAGASAASYSSTQFDSAGG 343
           +T + + HLPQP  ++R  GL+ AGAA A++  + +    + GG
Sbjct: 37  QTPDGEQHLPQPLLLSRGSGLQ-AGAAAAASLEHDAAAGPACGG 79


>gi|118498359 ribosomal L1 domain containing 1 [Homo sapiens]
          Length = 490

 Score = 32.0 bits (71), Expect = 0.92
 Identities = 15/35 (42%), Positives = 22/35 (62%)

Query: 41 SRVRYWDLLLLIPNVLFLIFLLWKLPSARAKIRIT 75
          SR   + LLL     LFL+ +LWK+PS   ++R+T
Sbjct: 49 SRKNNYGLLLNENESLFLMVVLWKIPSKELRVRLT 83


>gi|5901884 cytochrome b-561 domain containing 2 [Homo sapiens]
          Length = 222

 Score = 29.6 bits (65), Expect = 4.6
 Identities = 30/84 (35%), Positives = 41/84 (48%), Gaps = 10/84 (11%)

Query: 176 AHLSAEDFNIY-----GHGGRQF-W---LVSSCFFFLVY-SLVVILPKTPLKERISLPSR 225
           AHL A  F I+       G   F W   L+S  F FL+  +L+V  P++ L   +S   R
Sbjct: 23  AHLVALGFTIFVAVLARPGSSLFSWHPVLMSLAFSFLMTEALLVFSPESSLLHSLSRKGR 82

Query: 226 RSFYVYAGILALLNLLQGLGSVLL 249
              +    +LALL  L GLG V+L
Sbjct: 83  ARCHWVLQLLALLCALLGLGLVIL 106


>gi|169218204 PREDICTED: similar to pre-B lymphocyte gene 1 [Homo
          sapiens]
          Length = 123

 Score = 29.3 bits (64), Expect = 6.0
 Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 1/31 (3%)

Query: 52 IPNVLFLIFLLWKLPSARAKIRITSSPIFIT 82
          +P  L  + LLW LP AR  I++T SP F++
Sbjct: 5  VPAQLLGLLLLW-LPGARCDIQLTQSPSFLS 34


>gi|8923370 CKLF-like MARVEL transmembrane domain containing 6 [Homo
           sapiens]
          Length = 183

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 2/47 (4%)

Query: 189 GGRQFWLVSSCFFFLVYSLVVILPKTPLKERISLPSRRS--FYVYAG 233
           GG  F+   SC  FL+  L++I+  TP  ER+     +S  FY+  G
Sbjct: 66  GGLYFFEFVSCSAFLLSLLILIVYCTPFYERVDTTKVKSSDFYITLG 112


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.326    0.140    0.422 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,110,522
Number of Sequences: 37866
Number of extensions: 536133
Number of successful extensions: 1933
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 1928
Number of HSP's gapped (non-prelim): 8
length of query: 373
length of database: 18,247,518
effective HSP length: 104
effective length of query: 269
effective length of database: 14,309,454
effective search space: 3849243126
effective search space used: 3849243126
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.