Search of human proteins with 21686999

Search of human proteins with 21686999

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|21686999 OMA1 homolog, zinc metallopeptidase [Homo sapiens]
         (524 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|21686999 OMA1 homolog, zinc metallopeptidase [Homo sapiens]       1070   0.0  
gi|206725544 FK506 binding protein 6 isoform b [Homo sapiens]          34   0.29 
gi|146229346 FK506 binding protein 6 isoform a [Homo sapiens]          34   0.29 
gi|52485606 formin-like 2 [Homo sapiens]                               34   0.37 
gi|223468659 kelch repeat and BTB (POZ) domain containing 2 [Hom...    31   2.4  
gi|113204617 skeletal muscle ryanodine receptor isoform 2 [Homo ...    31   3.2  
gi|113204615 skeletal muscle ryanodine receptor isoform 1 [Homo ...    31   3.2  
gi|4503177 testis expressed 28 [Homo sapiens]                          30   5.4  
gi|24415404 MDN1, midasin homolog [Homo sapiens]                       30   7.0  
gi|145207958 transmembrane protein 16G isoform NGEP long [Homo s...    29   9.2  
gi|119120861 formin-like 3 isoform 2 [Homo sapiens]                    29   9.2  
gi|119120874 formin-like 3 isoform 1 [Homo sapiens]                    29   9.2  
gi|188528901 syntaxin binding protein 2 isoform b [Homo sapiens]       29   9.2  
gi|21361565 ATP synthase, H+ transporting, mitochondrial F0 comp...    29   9.2  

>gi|21686999 OMA1 homolog, zinc metallopeptidase [Homo sapiens]
          Length = 524

 Score = 1070 bits (2768), Expect = 0.0
 Identities = 524/524 (100%), Positives = 524/524 (100%)

Query: 1   MSFICGLQSAARNHVFFRFNSLSNWRKCNTLASTSRGCHQVQVNHIVNKYQGLGVNQCDR 60
           MSFICGLQSAARNHVFFRFNSLSNWRKCNTLASTSRGCHQVQVNHIVNKYQGLGVNQCDR
Sbjct: 1   MSFICGLQSAARNHVFFRFNSLSNWRKCNTLASTSRGCHQVQVNHIVNKYQGLGVNQCDR 60

Query: 61  WSFLPGNFHFYSTFNNKRTGGLSSTKSKEIWRITSKCTVWNDAFSRQLLIKEVTAVPSLS 120
           WSFLPGNFHFYSTFNNKRTGGLSSTKSKEIWRITSKCTVWNDAFSRQLLIKEVTAVPSLS
Sbjct: 61  WSFLPGNFHFYSTFNNKRTGGLSSTKSKEIWRITSKCTVWNDAFSRQLLIKEVTAVPSLS 120

Query: 121 VLHPLSPASIRAIRNFHTSPRFQAAPVPLLLMILKPVQKLFAIIVGRGIRKWWQALPPNK 180
           VLHPLSPASIRAIRNFHTSPRFQAAPVPLLLMILKPVQKLFAIIVGRGIRKWWQALPPNK
Sbjct: 121 VLHPLSPASIRAIRNFHTSPRFQAAPVPLLLMILKPVQKLFAIIVGRGIRKWWQALPPNK 180

Query: 181 KEVVKENIRKNKWKLFLGLSSFGLLFVVFYFTHLEVSPITGRSKLLLLGKEQFRLLSELE 240
           KEVVKENIRKNKWKLFLGLSSFGLLFVVFYFTHLEVSPITGRSKLLLLGKEQFRLLSELE
Sbjct: 181 KEVVKENIRKNKWKLFLGLSSFGLLFVVFYFTHLEVSPITGRSKLLLLGKEQFRLLSELE 240

Query: 241 YEAWMEEFKNDMLTEKDARYLAVKEVLCHLIECNKDVPGISQINWVIHVVDSPIINAFVL 300
           YEAWMEEFKNDMLTEKDARYLAVKEVLCHLIECNKDVPGISQINWVIHVVDSPIINAFVL
Sbjct: 241 YEAWMEEFKNDMLTEKDARYLAVKEVLCHLIECNKDVPGISQINWVIHVVDSPIINAFVL 300

Query: 301 PNGQMFVFTGFLNSVTDIHQLSFLLGHEIAHAVLGHAAEKAGMVHLLDFLGMIFLTMIWA 360
           PNGQMFVFTGFLNSVTDIHQLSFLLGHEIAHAVLGHAAEKAGMVHLLDFLGMIFLTMIWA
Sbjct: 301 PNGQMFVFTGFLNSVTDIHQLSFLLGHEIAHAVLGHAAEKAGMVHLLDFLGMIFLTMIWA 360

Query: 361 ICPRDSLALLCQWIQSKLQEYMFNRPYSRKLEAEADKIGLLLAAKACADIRASSVFWQQM 420
           ICPRDSLALLCQWIQSKLQEYMFNRPYSRKLEAEADKIGLLLAAKACADIRASSVFWQQM
Sbjct: 361 ICPRDSLALLCQWIQSKLQEYMFNRPYSRKLEAEADKIGLLLAAKACADIRASSVFWQQM 420

Query: 421 EFVDSLHGQPKMPEWLSTHPSHGNRVEYLDRLIPQALKIREMCNCPPLSNPDPRLLFKLS 480
           EFVDSLHGQPKMPEWLSTHPSHGNRVEYLDRLIPQALKIREMCNCPPLSNPDPRLLFKLS
Sbjct: 421 EFVDSLHGQPKMPEWLSTHPSHGNRVEYLDRLIPQALKIREMCNCPPLSNPDPRLLFKLS 480

Query: 481 TKHFLEESEKEDLNITKKQKMDTLPIQKQEQIPLTYIVEKRTGS 524
           TKHFLEESEKEDLNITKKQKMDTLPIQKQEQIPLTYIVEKRTGS
Sbjct: 481 TKHFLEESEKEDLNITKKQKMDTLPIQKQEQIPLTYIVEKRTGS 524


>gi|206725544 FK506 binding protein 6 isoform b [Homo sapiens]
          Length = 322

 Score = 34.3 bits (77), Expect = 0.29
 Identities = 15/51 (29%), Positives = 27/51 (52%)

Query: 465 CPPLSNPDPRLLFKLSTKHFLEESEKEDLNITKKQKMDTLPIQKQEQIPLT 515
           CPPL  P+  +LF++    FL+ +E +       ++ D  P+QK  ++  T
Sbjct: 118 CPPLIPPNTTVLFEIELLDFLDCAESDKFCALSAEQQDQFPLQKVLKVAAT 168


>gi|146229346 FK506 binding protein 6 isoform a [Homo sapiens]
          Length = 327

 Score = 34.3 bits (77), Expect = 0.29
 Identities = 15/51 (29%), Positives = 27/51 (52%)

Query: 465 CPPLSNPDPRLLFKLSTKHFLEESEKEDLNITKKQKMDTLPIQKQEQIPLT 515
           CPPL  P+  +LF++    FL+ +E +       ++ D  P+QK  ++  T
Sbjct: 123 CPPLIPPNTTVLFEIELLDFLDCAESDKFCALSAEQQDQFPLQKVLKVAAT 173


>gi|52485606 formin-like 2 [Homo sapiens]
          Length = 1092

 Score = 33.9 bits (76), Expect = 0.37
 Identities = 32/121 (26%), Positives = 56/121 (46%), Gaps = 17/121 (14%)

Query: 142 FQAAPVPLLLMILKP--VQKLFAIIVGRGIRKWWQALPPNKKEVVKENIRKNKWKLFLGL 199
           F+A  VPL L + +P  +++ FAI++          LPP+K  ++++   + KW+L    
Sbjct: 14  FRAHNVPLKLPMPEPGELEERFAIVLNA------MNLPPDKARLLRQYDNEKKWELICDQ 67

Query: 200 SSFGLLFVVF-YFTHLE--VSPITGRSKLLLLGKEQFRLLSELE------YEAWMEEFKN 250
             F +      Y   L+  + P   R K     +E  ++L ELE      +  W+ EF N
Sbjct: 68  ERFQVKNPPHTYIQKLKGYLDPAVTRKKFRRRVQESTQVLRELEISLRTNHIGWVREFLN 127

Query: 251 D 251
           +
Sbjct: 128 E 128


>gi|223468659 kelch repeat and BTB (POZ) domain containing 2 [Homo
           sapiens]
          Length = 623

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 13/27 (48%), Positives = 17/27 (62%)

Query: 170 RKWWQALPPNKKEVVKENIRKNKWKLF 196
           R W+Q LPPN K VV + + K+  K F
Sbjct: 231 RAWFQGLPPNDKSVVVQGLYKSMPKFF 257


>gi|113204617 skeletal muscle ryanodine receptor isoform 2 [Homo
           sapiens]
          Length = 5033

 Score = 30.8 bits (68), Expect = 3.2
 Identities = 48/218 (22%), Positives = 89/218 (40%), Gaps = 32/218 (14%)

Query: 117 PSLSVLHPLSPASIRAIRNFHTSPRFQAAPVPLLLMILKPVQKL--------FAIIVGRG 168
           PS  + H    + +R++RN  +  + +     +L M+L  + +L        FA   G  
Sbjct: 454 PSEDLQHEEKQSKLRSLRNRQSLFQEEG----MLSMVLNCIDRLNVYTTAAHFAEFAGEE 509

Query: 169 IRKWWQALPPNKKEVVKENIRKNKWKLFLGLSSFGLLFVVFYFTHLEVSP--ITGRSKLL 226
             + W+ +     E++   IR N+      L S  L ++V     LE S   +     +L
Sbjct: 510 AAESWKEIVNLLYELLASLIRGNRSNC--ALFSTNLDWLVSKLDRLEASSGILEVLYCVL 567

Query: 227 LLGKEQFRLLSELEYEAWMEEFKNDMLTEKDARYLAVKEVLCHLIECNKDVPGISQINWV 286
           +   E   ++ E   ++ +       L +K  R   V +VLC L  CN    G++  +  
Sbjct: 568 IESPEVLNIIQENHIKSIIS------LLDKHGRNHKVLDVLCSLCVCN----GVAVRS-- 615

Query: 287 IHVVDSPIINAFVLPNGQMFVFTGFLNSVTDIHQLSFL 324
               +  +I   +LP  ++ + T  +N VT I    F+
Sbjct: 616 ----NQDLITENLLPGRELLLQTNLINYVTSIRPNIFV 649


>gi|113204615 skeletal muscle ryanodine receptor isoform 1 [Homo
           sapiens]
          Length = 5038

 Score = 30.8 bits (68), Expect = 3.2
 Identities = 48/218 (22%), Positives = 89/218 (40%), Gaps = 32/218 (14%)

Query: 117 PSLSVLHPLSPASIRAIRNFHTSPRFQAAPVPLLLMILKPVQKL--------FAIIVGRG 168
           PS  + H    + +R++RN  +  + +     +L M+L  + +L        FA   G  
Sbjct: 454 PSEDLQHEEKQSKLRSLRNRQSLFQEEG----MLSMVLNCIDRLNVYTTAAHFAEFAGEE 509

Query: 169 IRKWWQALPPNKKEVVKENIRKNKWKLFLGLSSFGLLFVVFYFTHLEVSP--ITGRSKLL 226
             + W+ +     E++   IR N+      L S  L ++V     LE S   +     +L
Sbjct: 510 AAESWKEIVNLLYELLASLIRGNRSNC--ALFSTNLDWLVSKLDRLEASSGILEVLYCVL 567

Query: 227 LLGKEQFRLLSELEYEAWMEEFKNDMLTEKDARYLAVKEVLCHLIECNKDVPGISQINWV 286
           +   E   ++ E   ++ +       L +K  R   V +VLC L  CN    G++  +  
Sbjct: 568 IESPEVLNIIQENHIKSIIS------LLDKHGRNHKVLDVLCSLCVCN----GVAVRS-- 615

Query: 287 IHVVDSPIINAFVLPNGQMFVFTGFLNSVTDIHQLSFL 324
               +  +I   +LP  ++ + T  +N VT I    F+
Sbjct: 616 ----NQDLITENLLPGRELLLQTNLINYVTSIRPNIFV 649


>gi|4503177 testis expressed 28 [Homo sapiens]
          Length = 410

 Score = 30.0 bits (66), Expect = 5.4
 Identities = 27/116 (23%), Positives = 48/116 (41%), Gaps = 20/116 (17%)

Query: 75  NNKRTGGLSSTKSKEIWRITSKCTVWNDAFSRQLLIKEVTAVPSLSVLHPLSPASIRAIR 134
           + +R   LS  ++KEIW IT     +    S+  ++++VT + +   L    P  +    
Sbjct: 276 SEERMAYLSYERAKEIWEITE---TFKSRISKLEMLQQVTQLEAAEHLQSRPPQMLFKF- 331

Query: 135 NFHTSPRFQAAPV-----------PLLLMILKPVQKLFAIIVGRGIRKW--WQALP 177
               SPR   A V           P  L+  +       +++G G+  W  W+A+P
Sbjct: 332 ---LSPRLSLATVLLVFVSTLCACPSSLISSRLCTCTMLMLIGLGVLAWQRWRAIP 384


>gi|24415404 MDN1, midasin homolog [Homo sapiens]
          Length = 5596

 Score = 29.6 bits (65), Expect = 7.0
 Identities = 27/96 (28%), Positives = 42/96 (43%), Gaps = 8/96 (8%)

Query: 428  GQPKMPEWLSTHPSHGNRVEYLDRLIPQALKIREMCNCPPLSNPDPRL---LFKLSTKHF 484
            GQ  +PEW       G   E L RL     ++R+MC      +P PRL   L + + +  
Sbjct: 4033 GQATIPEWCQGAAPSGLEGELLRRLPKLRKRMRKMCLTFMKESPLPRLVEGLDQFTGEVI 4092

Query: 485  LEESEKEDLNI-----TKKQKMDTLPIQKQEQIPLT 515
               SE + L +      +KQ+ +   I  Q+Q  L+
Sbjct: 4093 SSVSELQSLKVEPSAEKEKQRSEAKHILMQKQRALS 4128


>gi|145207958 transmembrane protein 16G isoform NGEP long [Homo
           sapiens]
          Length = 933

 Score = 29.3 bits (64), Expect = 9.2
 Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 1/48 (2%)

Query: 354 FLTMIWAICPRDSL-ALLCQWIQSKLQEYMFNRPYSRKLEAEADKIGL 400
           F+T+  A CP   L ALL  W++ +L    F   Y R +   A  IG+
Sbjct: 717 FVTIFVAACPLAPLFALLNNWVEIRLDARKFVCEYRRPVAERAQDIGI 764


>gi|119120861 formin-like 3 isoform 2 [Homo sapiens]
          Length = 976

 Score = 29.3 bits (64), Expect = 9.2
 Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 9/85 (10%)

Query: 176 LPPNKKEVVKENIRKNKWKLFLGLSSFGLLFVVF-YFTHLE--VSPITGRSKLLLLGKEQ 232
           LPP+K  ++++   + KW L      F +      Y   L+  + P   R K     +E 
Sbjct: 47  LPPDKARLLRQYDNEKKWDLICDQERFQVKNPPHTYIQKLQSFLDPSVTRKKFRRRVQES 106

Query: 233 FRLLSELE------YEAWMEEFKND 251
            ++L ELE      +  W+ EF ND
Sbjct: 107 TKVLRELEISLRTNHIGWVREFLND 131


>gi|119120874 formin-like 3 isoform 1 [Homo sapiens]
          Length = 1027

 Score = 29.3 bits (64), Expect = 9.2
 Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 9/85 (10%)

Query: 176 LPPNKKEVVKENIRKNKWKLFLGLSSFGLLFVVF-YFTHLE--VSPITGRSKLLLLGKEQ 232
           LPP+K  ++++   + KW L      F +      Y   L+  + P   R K     +E 
Sbjct: 47  LPPDKARLLRQYDNEKKWDLICDQERFQVKNPPHTYIQKLQSFLDPSVTRKKFRRRVQES 106

Query: 233 FRLLSELE------YEAWMEEFKND 251
            ++L ELE      +  W+ EF ND
Sbjct: 107 TKVLRELEISLRTNHIGWVREFLND 131


>gi|188528901 syntaxin binding protein 2 isoform b [Homo sapiens]
          Length = 590

 Score = 29.3 bits (64), Expect = 9.2
 Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 5/56 (8%)

Query: 92  RITSKCTVWNDAFSRQLLI-----KEVTAVPSLSVLHPLSPASIRAIRNFHTSPRF 142
           RI S C   +D  +  + I     K    +PSL  ++ LSP     I++F  +P F
Sbjct: 39  RILSSCCKMSDILAEGITIVEDINKRREPIPSLEAIYLLSPTEKALIKDFQGTPTF 94


>gi|21361565 ATP synthase, H+ transporting, mitochondrial F0
           complex, subunit B1 precursor [Homo sapiens]
          Length = 256

 Score = 29.3 bits (64), Expect = 9.2
 Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 1/46 (2%)

Query: 105 SRQLLIKEVTAVPSLSVLHPLSPASIRAIRNFHTSPRFQAAPVPLL 150
           SR +L    TA PSL     L P  ++A R FHT  +    PVP L
Sbjct: 3   SRVVLSAAATAAPSLKNAAFLGPGVLQATRTFHTG-QPHLVPVPPL 47


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.324    0.137    0.428 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,346,146
Number of Sequences: 37866
Number of extensions: 924424
Number of successful extensions: 2632
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 2628
Number of HSP's gapped (non-prelim): 14
length of query: 524
length of database: 18,247,518
effective HSP length: 107
effective length of query: 417
effective length of database: 14,195,856
effective search space: 5919671952
effective search space used: 5919671952
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.