Search of human proteins with 21389361

Search of human proteins with 21389361

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|21389361 proline racemase-like [Homo sapiens]
         (354 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|21389361 proline racemase-like [Homo sapiens]                      717   0.0  
gi|32479521 dishevelled 1 [Homo sapiens]                               32   0.66 
gi|24308227 zinc finger protein 687 [Homo sapiens]                     31   1.5  
gi|122937311 solute carrier family 35, member F4 [Homo sapiens]        30   4.3  
gi|197313636 N-methyl-D-aspartate receptor subunit 2A isoform 1 ...    29   5.6  
gi|4504125 N-methyl-D-aspartate receptor subunit 2A isoform 1 pr...    29   5.6  
gi|46519151 ankyrin repeat and KH domain containing 1 isoform 2 ...    29   5.6  
gi|150170706 anaphase promoting complex subunit 10 [Homo sapiens]      29   5.6  

>gi|21389361 proline racemase-like [Homo sapiens]
          Length = 354

 Score =  717 bits (1852), Expect = 0.0
 Identities = 354/354 (100%), Positives = 354/354 (100%)

Query: 1   MESALAVPRLPPHDPGTPVLSVVDMHTGGEPLRIVLAGCPEVSGPTLLAKRRYMRQHLDH 60
           MESALAVPRLPPHDPGTPVLSVVDMHTGGEPLRIVLAGCPEVSGPTLLAKRRYMRQHLDH
Sbjct: 1   MESALAVPRLPPHDPGTPVLSVVDMHTGGEPLRIVLAGCPEVSGPTLLAKRRYMRQHLDH 60

Query: 61  VRRRLMFEPRGHRDMYGAVLVPSELPDAHLGVLFLHNEGYSSMCGHAVLALGRFALDFGL 120
           VRRRLMFEPRGHRDMYGAVLVPSELPDAHLGVLFLHNEGYSSMCGHAVLALGRFALDFGL
Sbjct: 61  VRRRLMFEPRGHRDMYGAVLVPSELPDAHLGVLFLHNEGYSSMCGHAVLALGRFALDFGL 120

Query: 121 VPAPPAGTREARVNIHCPCGLVTAFVACEDGRSHGPVRFHSVPAFVLATDLMVDVPGHGK 180
           VPAPPAGTREARVNIHCPCGLVTAFVACEDGRSHGPVRFHSVPAFVLATDLMVDVPGHGK
Sbjct: 121 VPAPPAGTREARVNIHCPCGLVTAFVACEDGRSHGPVRFHSVPAFVLATDLMVDVPGHGK 180

Query: 181 VMVDIAYGGAFYAFVTAEKLGLDICSAKTRDLVDAASAVTEAVKAQFKINHPDSEDLAFL 240
           VMVDIAYGGAFYAFVTAEKLGLDICSAKTRDLVDAASAVTEAVKAQFKINHPDSEDLAFL
Sbjct: 181 VMVDIAYGGAFYAFVTAEKLGLDICSAKTRDLVDAASAVTEAVKAQFKINHPDSEDLAFL 240

Query: 241 YGTILTDGKDAYTKEPTTNICVFADEQVDRSPTGSGVTARIALQYHKGLLELNQMRAFKS 300
           YGTILTDGKDAYTKEPTTNICVFADEQVDRSPTGSGVTARIALQYHKGLLELNQMRAFKS
Sbjct: 241 YGTILTDGKDAYTKEPTTNICVFADEQVDRSPTGSGVTARIALQYHKGLLELNQMRAFKS 300

Query: 301 SATGSVFTGKAVREAKCGDFKAVIVEVSGQAHYTGTASFIIEDDDPLRDGFLLK 354
           SATGSVFTGKAVREAKCGDFKAVIVEVSGQAHYTGTASFIIEDDDPLRDGFLLK
Sbjct: 301 SATGSVFTGKAVREAKCGDFKAVIVEVSGQAHYTGTASFIIEDDDPLRDGFLLK 354


>gi|32479521 dishevelled 1 [Homo sapiens]
          Length = 670

 Score = 32.3 bits (72), Expect = 0.66
 Identities = 16/43 (37%), Positives = 24/43 (55%)

Query: 2   ESALAVPRLPPHDPGTPVLSVVDMHTGGEPLRIVLAGCPEVSG 44
           +++   P LPP  P T   +VV    GG P+R + A  PE++G
Sbjct: 608 QASATAPGLPPPHPTTKAYTVVGGPPGGPPVRELAAVPPELTG 650


>gi|24308227 zinc finger protein 687 [Homo sapiens]
          Length = 1237

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 2/57 (3%)

Query: 31  PLRIVLAGCPEVSGPTLLAKRRYMRQHLDHVRRRLMFEPRGHRDMYGAVLVPSELPD 87
           P R+ +  CP  S P L A++R M +HL +  +    E    +   GA+L P   P+
Sbjct: 852 PQRVSVFKCP--SCPLLFAQKRTMLEHLKNTHQSGRLEETAGKGAGGALLTPKTEPE 906


>gi|122937311 solute carrier family 35, member F4 [Homo sapiens]
          Length = 521

 Score = 29.6 bits (65), Expect = 4.3
 Identities = 20/69 (28%), Positives = 29/69 (42%), Gaps = 1/69 (1%)

Query: 69  PRGHRDMYGAVLVPSELPDAHLGVLFLHNEGYSSMCGHAVLALGRFALDFGLVPAPPAGT 128
           P  H  +   +   S   D+   +L L N+G S +CGH V    R A D G        +
Sbjct: 87  PSSHSGISRQLSPLSVTEDSSAPILELQNQGSSGVCGHRVERQNRSA-DDGTQTHSENSS 145

Query: 129 REARVNIHC 137
           +E R+   C
Sbjct: 146 QENRIKARC 154


>gi|197313636 N-methyl-D-aspartate receptor subunit 2A isoform 1
            precursor [Homo sapiens]
          Length = 1464

 Score = 29.3 bits (64), Expect = 5.6
 Identities = 20/71 (28%), Positives = 29/71 (40%), Gaps = 9/71 (12%)

Query: 10   LPPHDPGTPVLSVVDMHTGGEPLRIVLAGCP----EVSGPTLLAKRRYMRQHLDHVRRRL 65
            LP H    P L     H+  +  R+V+  CP    + S P+      Y+R  L       
Sbjct: 1358 LPDHTSDNPFL-----HSHRDDQRLVIGRCPSDPYKHSLPSQAVNDSYLRSSLRSTASYC 1412

Query: 66   MFEPRGHRDMY 76
              + RGH D+Y
Sbjct: 1413 SRDSRGHNDVY 1423


>gi|4504125 N-methyl-D-aspartate receptor subunit 2A isoform 1
            precursor [Homo sapiens]
          Length = 1464

 Score = 29.3 bits (64), Expect = 5.6
 Identities = 20/71 (28%), Positives = 29/71 (40%), Gaps = 9/71 (12%)

Query: 10   LPPHDPGTPVLSVVDMHTGGEPLRIVLAGCP----EVSGPTLLAKRRYMRQHLDHVRRRL 65
            LP H    P L     H+  +  R+V+  CP    + S P+      Y+R  L       
Sbjct: 1358 LPDHTSDNPFL-----HSHRDDQRLVIGRCPSDPYKHSLPSQAVNDSYLRSSLRSTASYC 1412

Query: 66   MFEPRGHRDMY 76
              + RGH D+Y
Sbjct: 1413 SRDSRGHNDVY 1423


>gi|46519151 ankyrin repeat and KH domain containing 1 isoform 2
           [Homo sapiens]
          Length = 616

 Score = 29.3 bits (64), Expect = 5.6
 Identities = 28/118 (23%), Positives = 45/118 (38%), Gaps = 13/118 (11%)

Query: 214 DAASAVTEAVKAQFKINHPDSEDLAFLYGTILTDGKDAYTKEPTTNI--------CVFAD 265
           D  S V   +  Q  +++P  +  + ++ +   +G D  T +P T            FAD
Sbjct: 98  DEVSEVESFILDQEDLDNPVLKTTSEIFLSSTAEGADLRTVDPETQARLEALLEAAAFAD 157

Query: 266 EQVDRSPTGSGVTARIALQYHKGLLELNQMRAFKSSATGSVFTGKAVREAKCGDFKAV 323
            +V R  T S     ++    +    L +M+A  S   G V T         GD  AV
Sbjct: 158 PEVLRRLTSS-----VSCALDEAAAALTRMKAENSHNAGQVDTRSLAEACSDGDVNAV 210


>gi|150170706 anaphase promoting complex subunit 10 [Homo sapiens]
          Length = 185

 Score = 29.3 bits (64), Expect = 5.6
 Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 1/48 (2%)

Query: 254 KEPTTNICVFADEQVDRSPTGSGVTARIALQYHKGLLELNQMRAFKSS 301
           K     +C++AD + D S T S ++ R+   +H  L E+ Q+   + S
Sbjct: 71  KTTVKTLCIYADYKSDESYTPSKISVRVGNNFH-NLQEIRQLELVEPS 117


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.322    0.138    0.419 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,368,782
Number of Sequences: 37866
Number of extensions: 654408
Number of successful extensions: 1178
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 1176
Number of HSP's gapped (non-prelim): 8
length of query: 354
length of database: 18,247,518
effective HSP length: 103
effective length of query: 251
effective length of database: 14,347,320
effective search space: 3601177320
effective search space used: 3601177320
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.