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Search of human proteins with 21362030
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|21362030 translocase of outer mitochondrial membrane 40
homolog-like [Homo sapiens]
(308 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|21362030 translocase of outer mitochondrial membrane 40 homol... 632 0.0
gi|193083122 translocase of outer mitochondrial membrane 40 [Hom... 399 e-111
gi|193083120 translocase of outer mitochondrial membrane 40 [Hom... 399 e-111
gi|5174723 translocase of outer mitochondrial membrane 40 [Homo ... 399 e-111
gi|164607124 Fanconi anemia, complementation group I isoform 1 [... 30 2.1
gi|82830440 Fanconi anemia, complementation group I isoform 2 [H... 30 2.1
gi|194097398 protein tyrosine phosphatase, receptor type, G prec... 30 2.7
gi|188536004 zinc finger protein 469 [Homo sapiens] 28 7.9
gi|46852147 mitochondrial isoleucine tRNA synthetase [Homo sapiens] 28 7.9
>gi|21362030 translocase of outer mitochondrial membrane 40
homolog-like [Homo sapiens]
Length = 308
Score = 632 bits (1630), Expect = 0.0
Identities = 308/308 (100%), Positives = 308/308 (100%)
Query: 1 MGNTLGLAPMGTLPRRSPRREEPLPNPGSFDELHRLCKDVFPAQMEGVKLVVNKVLSSHF 60
MGNTLGLAPMGTLPRRSPRREEPLPNPGSFDELHRLCKDVFPAQMEGVKLVVNKVLSSHF
Sbjct: 1 MGNTLGLAPMGTLPRRSPRREEPLPNPGSFDELHRLCKDVFPAQMEGVKLVVNKVLSSHF 60
Query: 61 QVAHTIHMSALGLPGYHLHAAYAGDWQLSPTEVFPTVVGDMDSSGSLNAQVLLLLAERLR 120
QVAHTIHMSALGLPGYHLHAAYAGDWQLSPTEVFPTVVGDMDSSGSLNAQVLLLLAERLR
Sbjct: 61 QVAHTIHMSALGLPGYHLHAAYAGDWQLSPTEVFPTVVGDMDSSGSLNAQVLLLLAERLR 120
Query: 121 AKAVFQTQQAKFLTWQFDGEYRGDDYTATLTLGNPDLIGESVIMVAHFLQSLTHRLVLGG 180
AKAVFQTQQAKFLTWQFDGEYRGDDYTATLTLGNPDLIGESVIMVAHFLQSLTHRLVLGG
Sbjct: 121 AKAVFQTQQAKFLTWQFDGEYRGDDYTATLTLGNPDLIGESVIMVAHFLQSLTHRLVLGG 180
Query: 181 ELVYHRRPGEEGAILTLAGKYSAVHWVATLNVGSGGAHASYYHRANEQVQVGVEFEANTR 240
ELVYHRRPGEEGAILTLAGKYSAVHWVATLNVGSGGAHASYYHRANEQVQVGVEFEANTR
Sbjct: 181 ELVYHRRPGEEGAILTLAGKYSAVHWVATLNVGSGGAHASYYHRANEQVQVGVEFEANTR 240
Query: 241 LQDTTFSFGYHLTLPQANMVFRGLVDSNWCVGAVLEKKMPPLPVTLALGAFLNHWRNRFH 300
LQDTTFSFGYHLTLPQANMVFRGLVDSNWCVGAVLEKKMPPLPVTLALGAFLNHWRNRFH
Sbjct: 241 LQDTTFSFGYHLTLPQANMVFRGLVDSNWCVGAVLEKKMPPLPVTLALGAFLNHWRNRFH 300
Query: 301 CGFSITVG 308
CGFSITVG
Sbjct: 301 CGFSITVG 308
>gi|193083122 translocase of outer mitochondrial membrane 40 [Homo
sapiens]
Length = 361
Score = 399 bits (1025), Expect = e-111
Identities = 184/285 (64%), Positives = 231/285 (81%)
Query: 24 LPNPGSFDELHRLCKDVFPAQMEGVKLVVNKVLSSHFQVAHTIHMSALGLPGYHLHAAYA 83
LPNPG+F+E HR CK++FP QMEGVKL VNK LS+HFQV HT+ +S +G YH Y
Sbjct: 77 LPNPGTFEECHRKCKELFPIQMEGVKLTVNKGLSNHFQVNHTVALSTIGESNYHFGVTYV 136
Query: 84 GDWQLSPTEVFPTVVGDMDSSGSLNAQVLLLLAERLRAKAVFQTQQAKFLTWQFDGEYRG 143
G QLSPTE FP +VGDMD+SGSLNAQV+ L LR+K QTQQ+KF+ WQ DGEYRG
Sbjct: 137 GTKQLSPTEAFPVLVGDMDNSGSLNAQVIHQLGPGLRSKMAIQTQQSKFVNWQVDGEYRG 196
Query: 144 DDYTATLTLGNPDLIGESVIMVAHFLQSLTHRLVLGGELVYHRRPGEEGAILTLAGKYSA 203
D+TA +TLGNPD++ S I+VAH+LQS+T L LGGELVYHRRPGEEG +++LAGKY+
Sbjct: 197 SDFTAAVTLGNPDVLVGSGILVAHYLQSITPCLALGGELVYHRRPGEEGTVMSLAGKYTL 256
Query: 204 VHWVATLNVGSGGAHASYYHRANEQVQVGVEFEANTRLQDTTFSFGYHLTLPQANMVFRG 263
+W+AT+ +G G HA+YYH+A++Q+QVGVEFEA+TR+QDT+ SFGY L LP+AN++F+G
Sbjct: 257 NNWLATVTLGQAGMHATYYHKASDQLQVGVEFEASTRMQDTSVSFGYQLDLPKANLLFKG 316
Query: 264 LVDSNWCVGAVLEKKMPPLPVTLALGAFLNHWRNRFHCGFSITVG 308
VDSNW VGA LEKK+PPLP+TLALGAFLNH +N+F CGF +T+G
Sbjct: 317 SVDSNWIVGATLEKKLPPLPLTLALGAFLNHRKNKFQCGFGLTIG 361
>gi|193083120 translocase of outer mitochondrial membrane 40 [Homo
sapiens]
Length = 361
Score = 399 bits (1025), Expect = e-111
Identities = 184/285 (64%), Positives = 231/285 (81%)
Query: 24 LPNPGSFDELHRLCKDVFPAQMEGVKLVVNKVLSSHFQVAHTIHMSALGLPGYHLHAAYA 83
LPNPG+F+E HR CK++FP QMEGVKL VNK LS+HFQV HT+ +S +G YH Y
Sbjct: 77 LPNPGTFEECHRKCKELFPIQMEGVKLTVNKGLSNHFQVNHTVALSTIGESNYHFGVTYV 136
Query: 84 GDWQLSPTEVFPTVVGDMDSSGSLNAQVLLLLAERLRAKAVFQTQQAKFLTWQFDGEYRG 143
G QLSPTE FP +VGDMD+SGSLNAQV+ L LR+K QTQQ+KF+ WQ DGEYRG
Sbjct: 137 GTKQLSPTEAFPVLVGDMDNSGSLNAQVIHQLGPGLRSKMAIQTQQSKFVNWQVDGEYRG 196
Query: 144 DDYTATLTLGNPDLIGESVIMVAHFLQSLTHRLVLGGELVYHRRPGEEGAILTLAGKYSA 203
D+TA +TLGNPD++ S I+VAH+LQS+T L LGGELVYHRRPGEEG +++LAGKY+
Sbjct: 197 SDFTAAVTLGNPDVLVGSGILVAHYLQSITPCLALGGELVYHRRPGEEGTVMSLAGKYTL 256
Query: 204 VHWVATLNVGSGGAHASYYHRANEQVQVGVEFEANTRLQDTTFSFGYHLTLPQANMVFRG 263
+W+AT+ +G G HA+YYH+A++Q+QVGVEFEA+TR+QDT+ SFGY L LP+AN++F+G
Sbjct: 257 NNWLATVTLGQAGMHATYYHKASDQLQVGVEFEASTRMQDTSVSFGYQLDLPKANLLFKG 316
Query: 264 LVDSNWCVGAVLEKKMPPLPVTLALGAFLNHWRNRFHCGFSITVG 308
VDSNW VGA LEKK+PPLP+TLALGAFLNH +N+F CGF +T+G
Sbjct: 317 SVDSNWIVGATLEKKLPPLPLTLALGAFLNHRKNKFQCGFGLTIG 361
>gi|5174723 translocase of outer mitochondrial membrane 40 [Homo
sapiens]
Length = 361
Score = 399 bits (1025), Expect = e-111
Identities = 184/285 (64%), Positives = 231/285 (81%)
Query: 24 LPNPGSFDELHRLCKDVFPAQMEGVKLVVNKVLSSHFQVAHTIHMSALGLPGYHLHAAYA 83
LPNPG+F+E HR CK++FP QMEGVKL VNK LS+HFQV HT+ +S +G YH Y
Sbjct: 77 LPNPGTFEECHRKCKELFPIQMEGVKLTVNKGLSNHFQVNHTVALSTIGESNYHFGVTYV 136
Query: 84 GDWQLSPTEVFPTVVGDMDSSGSLNAQVLLLLAERLRAKAVFQTQQAKFLTWQFDGEYRG 143
G QLSPTE FP +VGDMD+SGSLNAQV+ L LR+K QTQQ+KF+ WQ DGEYRG
Sbjct: 137 GTKQLSPTEAFPVLVGDMDNSGSLNAQVIHQLGPGLRSKMAIQTQQSKFVNWQVDGEYRG 196
Query: 144 DDYTATLTLGNPDLIGESVIMVAHFLQSLTHRLVLGGELVYHRRPGEEGAILTLAGKYSA 203
D+TA +TLGNPD++ S I+VAH+LQS+T L LGGELVYHRRPGEEG +++LAGKY+
Sbjct: 197 SDFTAAVTLGNPDVLVGSGILVAHYLQSITPCLALGGELVYHRRPGEEGTVMSLAGKYTL 256
Query: 204 VHWVATLNVGSGGAHASYYHRANEQVQVGVEFEANTRLQDTTFSFGYHLTLPQANMVFRG 263
+W+AT+ +G G HA+YYH+A++Q+QVGVEFEA+TR+QDT+ SFGY L LP+AN++F+G
Sbjct: 257 NNWLATVTLGQAGMHATYYHKASDQLQVGVEFEASTRMQDTSVSFGYQLDLPKANLLFKG 316
Query: 264 LVDSNWCVGAVLEKKMPPLPVTLALGAFLNHWRNRFHCGFSITVG 308
VDSNW VGA LEKK+PPLP+TLALGAFLNH +N+F CGF +T+G
Sbjct: 317 SVDSNWIVGATLEKKLPPLPLTLALGAFLNHRKNKFQCGFGLTIG 361
>gi|164607124 Fanconi anemia, complementation group I isoform 1
[Homo sapiens]
Length = 1328
Score = 30.4 bits (67), Expect = 2.1
Identities = 23/83 (27%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
Query: 112 LLLLAERLRAKAVFQTQQAKF--LTWQFDGEYRGDDYTATLTLGNPDLIGESVIMVAHFL 169
LL+L+ + K+V + A F L Q + E GD+ +T+ + +L ++ H +
Sbjct: 217 LLVLSSKGSRKSVLEGIIAFFSALDKQHNEEQSGDELLDVVTVPSGELRHVEGTIILHIV 276
Query: 170 QSLTHRLVLGGELVYHRRPGEEG 192
++ LG ELV H + G++G
Sbjct: 277 FAIKLDYELGRELVKHLKVGQQG 299
>gi|82830440 Fanconi anemia, complementation group I isoform 2 [Homo
sapiens]
Length = 1268
Score = 30.4 bits (67), Expect = 2.1
Identities = 23/83 (27%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
Query: 112 LLLLAERLRAKAVFQTQQAKF--LTWQFDGEYRGDDYTATLTLGNPDLIGESVIMVAHFL 169
LL+L+ + K+V + A F L Q + E GD+ +T+ + +L ++ H +
Sbjct: 217 LLVLSSKGSRKSVLEGIIAFFSALDKQHNEEQSGDELLDVVTVPSGELRHVEGTIILHIV 276
Query: 170 QSLTHRLVLGGELVYHRRPGEEG 192
++ LG ELV H + G++G
Sbjct: 277 FAIKLDYELGRELVKHLKVGQQG 299
>gi|194097398 protein tyrosine phosphatase, receptor type, G
precursor [Homo sapiens]
Length = 1445
Score = 30.0 bits (66), Expect = 2.7
Identities = 17/58 (29%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
Query: 179 GGELVYHRRPGEEGAILTLAGKYSAVHWVATLNVGSGGAHASYYHRANEQVQVGVEFE 236
G + RR +G Y HWV T +V GG H S ++ +VG E++
Sbjct: 44 GSAVQIRRRKASGDPYWAYSGAYGPEHWV-TSSVSCGGRHQSPIDILDQYARVGEEYQ 100
>gi|188536004 zinc finger protein 469 [Homo sapiens]
Length = 3925
Score = 28.5 bits (62), Expect = 7.9
Identities = 42/150 (28%), Positives = 52/150 (34%), Gaps = 18/150 (12%)
Query: 6 GLAPMGTLPRRSPRREEPLPNPGSFDELHRLCKDVFPAQMEGVKLVVNKVLSSHFQVAHT 65
G AP R PR P+ + GS L LC +V P+ +G + + + V H
Sbjct: 3453 GSAPGPGEDRPPPRGSSPILSEGSLPALLHLCSEVAPSTTKGWPETLERPVD---PVTHP 3509
Query: 66 IHMSALGLPGYH----------LHAAYA---GDWQLSPTEVFPTVVGDMDSSGSLNAQVL 112
I LP H AA A GD L P S G L Q L
Sbjct: 3510 IR--GCELPSNHQECPPPSLSPFPAALADGRGDCALDGALERPENEASPGSPGPLLQQAL 3567
Query: 113 LLLAERLRAKAVFQTQQAKFLTWQFDGEYR 142
L A R A Q + K F G+ R
Sbjct: 3568 PLGASLPRPGARGQDAEGKRAPLVFSGKRR 3597
>gi|46852147 mitochondrial isoleucine tRNA synthetase [Homo sapiens]
Length = 1012
Score = 28.5 bits (62), Expect = 7.9
Identities = 34/152 (22%), Positives = 56/152 (36%), Gaps = 22/152 (14%)
Query: 9 PMGTLPRRSPRREEPLPNPGSFDELH----------RLCKDVFPAQMEG---VKLVVNKV 55
PM L R+ P E + F EL+ C P G V +NK+
Sbjct: 72 PMKLLGRQQPDTELEIQQKCGFSELYSWQRERKVKTEFCLHDGPPYANGDPHVGHALNKI 131
Query: 56 LSSHFQVAHTIHMSALGLPGYHLHAAYAGDWQLSPTEVFPTVVGDMDSSGSLNAQVLLLL 115
L +A+ HM + G +H D P E+ V+ ++ + + +
Sbjct: 132 LKD---IANRFHM----MNGSKIHFVPGWDCHGLPIEI--KVLSELGREAQNLSAMEIRK 182
Query: 116 AERLRAKAVFQTQQAKFLTWQFDGEYRGDDYT 147
R AKA + Q++ F+ W ++ YT
Sbjct: 183 KARSFAKAAIEKQKSAFIRWGIMADWNNCYYT 214
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.137 0.424
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,336,813
Number of Sequences: 37866
Number of extensions: 546736
Number of successful extensions: 1157
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 1150
Number of HSP's gapped (non-prelim): 12
length of query: 308
length of database: 18,247,518
effective HSP length: 102
effective length of query: 206
effective length of database: 14,385,186
effective search space: 2963348316
effective search space used: 2963348316
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.