Guide to the Human Genome
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Name: C1orf128 Sequence: fasta or formatted (211aa) NCBI GI: 21361837
Description:

chromosome 1 open reading frame 128

Referenced in:

Glutathione Pathways

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.3          9           2
 C cysteine            1.9          4           1
 D aspartate           6.2         13           3
 E glutamate          10.4         22           2
 F phenylalanine       4.7         10           1
 G glycine             8.1         17           4
 H histidine           4.7         10           1
 I isoleucine          5.7         12           3
 K lysine              3.8          8           1
 L leucine             7.6         16           2
 M methionine          1.9          4           1
 N asparagine          4.3          9           1
 P proline             4.3          9           2
 Q glutamine           2.8          6           1
 R arginine            8.1         17           2
 S serine              7.6         16           1
 T threonine           5.7         12           2
 V valine              3.8          8           1
 W tryptophan          0.9          2           1
 Y tyrosine            3.3          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   chromosome 1 open reading frame 128 
TXNL1                 0.084   thioredoxin-like 1 
C2orf40               0.017   esophageal cancer related gene 4 protein 
MYO5A                 0.007   myosin VA isoform 2 
MYO5A                 0.007   myosin VA isoform 1 
NOC3L                 0.007   nucleolar complex associated 3 homolog 
RTN4                  0.005   reticulon 4 isoform E 
RTN4                  0.005   reticulon 4 isoform A 
RPS11                 0.005   ribosomal protein S11 
ZCCHC11               0.005   zinc finger, CCHC domain containing 11 isoform a [Ho...
ZCCHC11               0.005   zinc finger, CCHC domain containing 11 isoform b [Ho...
ZCCHC11               0.005   zinc finger, CCHC domain containing 11 isoform c [Ho...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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