Search of human proteins with 21361476

Search of human proteins with 21361476

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|21361476 unc-50 homolog [Homo sapiens]
         (259 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|21361476 unc-50 homolog [Homo sapiens]                             535   e-152
gi|187608784 transmembrane channel-like 6 [Homo sapiens]               30   2.7  
gi|187608791 transmembrane channel-like 6 [Homo sapiens]               30   2.7  
gi|148271104 patched domain containing 1 [Homo sapiens]                30   2.7  
gi|31542711 ANT2-binding protein [Homo sapiens]                        29   4.7  
gi|214831730 fatty acid desaturase 1 [Homo sapiens]                    28   8.0  
gi|239756261 PREDICTED: similar to hect domain and RLD 2 [Homo s...    28   8.0  
gi|239750798 PREDICTED: similar to hect domain and RLD 2 [Homo s...    28   8.0  
gi|103471993 huntingtin interacting protein 14 [Homo sapiens]          28   8.0  

>gi|21361476 unc-50 homolog [Homo sapiens]
          Length = 259

 Score =  535 bits (1378), Expect = e-152
 Identities = 259/259 (100%), Positives = 259/259 (100%)

Query: 1   MLPSTSVNSLVQGNGVLNSRDAARHTAGAKRYKYLRRLFRFRQMDFEFAAWQMLYLFTSP 60
           MLPSTSVNSLVQGNGVLNSRDAARHTAGAKRYKYLRRLFRFRQMDFEFAAWQMLYLFTSP
Sbjct: 1   MLPSTSVNSLVQGNGVLNSRDAARHTAGAKRYKYLRRLFRFRQMDFEFAAWQMLYLFTSP 60

Query: 61  QRVYRNFHYRKQTKDQWARDDPAFLVLLSIWLCVSTIGFGFVLDMGFFETIKLLLWVVLI 120
           QRVYRNFHYRKQTKDQWARDDPAFLVLLSIWLCVSTIGFGFVLDMGFFETIKLLLWVVLI
Sbjct: 61  QRVYRNFHYRKQTKDQWARDDPAFLVLLSIWLCVSTIGFGFVLDMGFFETIKLLLWVVLI 120

Query: 121 DCVGVGLLIATLMWFISNKYLVKRQSRDYDVEWGYAFDVHLNAFYPLLVILHFIQLFFIN 180
           DCVGVGLLIATLMWFISNKYLVKRQSRDYDVEWGYAFDVHLNAFYPLLVILHFIQLFFIN
Sbjct: 121 DCVGVGLLIATLMWFISNKYLVKRQSRDYDVEWGYAFDVHLNAFYPLLVILHFIQLFFIN 180

Query: 181 HVILTDTFIGYLVGNTLWLVAVGYYIYVTFLGYSALPFLKNTVILLYPFAPLILLYGLSL 240
           HVILTDTFIGYLVGNTLWLVAVGYYIYVTFLGYSALPFLKNTVILLYPFAPLILLYGLSL
Sbjct: 181 HVILTDTFIGYLVGNTLWLVAVGYYIYVTFLGYSALPFLKNTVILLYPFAPLILLYGLSL 240

Query: 241 ALGWNFTHTLCSFYKYRVK 259
           ALGWNFTHTLCSFYKYRVK
Sbjct: 241 ALGWNFTHTLCSFYKYRVK 259


>gi|187608784 transmembrane channel-like 6 [Homo sapiens]
          Length = 805

 Score = 29.6 bits (65), Expect = 2.7
 Identities = 28/108 (25%), Positives = 44/108 (40%), Gaps = 10/108 (9%)

Query: 128 LIATLMW-FISNKYLVKRQSRDYDVE-------WGYAFDVHLNAFYPLLVILHFIQLFFI 179
           L   L+W  IS K L +R+  ++D+        +G         F PLL  +  I+L  +
Sbjct: 565 LFGELVWRIISEKKLKRRRKPEFDIARNVLELIYGQTLTWLGVLFSPLLPAVQIIKLLLV 624

Query: 180 NHVILTDTFIGYLVGNTLWLVAVGYYIYVTFLGYSALPFLKNTVILLY 227
            +V  T            WL +    +++T L + A  FL   V L Y
Sbjct: 625 FYVKKTSLLANCQAPRRPWLASHMSTVFLTLLCFPA--FLGAAVFLCY 670


>gi|187608791 transmembrane channel-like 6 [Homo sapiens]
          Length = 805

 Score = 29.6 bits (65), Expect = 2.7
 Identities = 28/108 (25%), Positives = 44/108 (40%), Gaps = 10/108 (9%)

Query: 128 LIATLMW-FISNKYLVKRQSRDYDVE-------WGYAFDVHLNAFYPLLVILHFIQLFFI 179
           L   L+W  IS K L +R+  ++D+        +G         F PLL  +  I+L  +
Sbjct: 565 LFGELVWRIISEKKLKRRRKPEFDIARNVLELIYGQTLTWLGVLFSPLLPAVQIIKLLLV 624

Query: 180 NHVILTDTFIGYLVGNTLWLVAVGYYIYVTFLGYSALPFLKNTVILLY 227
            +V  T            WL +    +++T L + A  FL   V L Y
Sbjct: 625 FYVKKTSLLANCQAPRRPWLASHMSTVFLTLLCFPA--FLGAAVFLCY 670


>gi|148271104 patched domain containing 1 [Homo sapiens]
          Length = 888

 Score = 29.6 bits (65), Expect = 2.7
 Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 9/59 (15%)

Query: 83  AFLV---LLSIWLCVSTIGFGFVLDMGFFETIKLLLWVVLIDCVGVGLLIATLMWFISN 138
           AFLV   L+++W+ ++ +   F + +GF     + LW V +DC+ V  LI  + + I N
Sbjct: 715 AFLVADSLINVWITLTVVSVEFGV-IGF-----MTLWKVELDCISVLCLIYGINYTIDN 767


>gi|31542711 ANT2-binding protein [Homo sapiens]
          Length = 371

 Score = 28.9 bits (63), Expect = 4.7
 Identities = 14/44 (31%), Positives = 21/44 (47%)

Query: 207 YVTFLGYSALPFLKNTVILLYPFAPLILLYGLSLALGWNFTHTL 250
           +  F G S    L  T  ++      ++++ LSLALGW   H L
Sbjct: 275 FFNFAGISVTKELSATTRMVLDSLRTVVIWALSLALGWEAFHAL 318


>gi|214831730 fatty acid desaturase 1 [Homo sapiens]
          Length = 501

 Score = 28.1 bits (61), Expect = 8.0
 Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 3/64 (4%)

Query: 127 LLIATLMWFISNKYLVKRQSRDYDVEWGYAFDVHLNAFY-PLLVILHFIQLFFINHVILT 185
           LL     W+I   Y V ++ +  D+ W   F V     Y PLL +  F+ LFFI   + +
Sbjct: 331 LLPLYFQWYIF--YFVIQRKKWVDLAWMITFYVRFFLTYVPLLGLKAFLGLFFIVRFLES 388

Query: 186 DTFI 189
           + F+
Sbjct: 389 NWFV 392


>gi|239756261 PREDICTED: similar to hect domain and RLD 2 [Homo
          sapiens]
          Length = 1102

 Score = 28.1 bits (61), Expect = 8.0
 Identities = 10/35 (28%), Positives = 18/35 (51%)

Query: 48 FAAWQMLYLFTSPQRVYRNFHYRKQTKDQWARDDP 82
          F  WQ+L L  +P+   R   ++   K+ W ++ P
Sbjct: 19 FGPWQLLILGKTPELGVRRLSFKVPLKEYWQKNSP 53


>gi|239750798 PREDICTED: similar to hect domain and RLD 2 [Homo
          sapiens]
          Length = 691

 Score = 28.1 bits (61), Expect = 8.0
 Identities = 10/35 (28%), Positives = 18/35 (51%)

Query: 48 FAAWQMLYLFTSPQRVYRNFHYRKQTKDQWARDDP 82
          F  WQ+L L  +P+   R   ++   K+ W ++ P
Sbjct: 19 FGPWQLLILGKTPELGVRRLSFKVPLKEYWQKNSP 53


>gi|103471993 huntingtin interacting protein 14 [Homo sapiens]
          Length = 632

 Score = 28.1 bits (61), Expect = 8.0
 Identities = 15/61 (24%), Positives = 28/61 (45%), Gaps = 2/61 (3%)

Query: 171 LHFIQLFFINHVILTDTFIGYLVGNTLWLVAVGYYIYVTFLGYSA--LPFLKNTVILLYP 228
           + F+   F +H + +   +G  +    W+    ++ +   L +    LPFL N+V L Y 
Sbjct: 342 VQFLSKSFFDHSMHSALPLGIYLATKFWMYVTWFFWFWNDLNFLFIHLPFLANSVALFYN 401

Query: 229 F 229
           F
Sbjct: 402 F 402


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.333    0.146    0.479 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,083,730
Number of Sequences: 37866
Number of extensions: 360958
Number of successful extensions: 935
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 931
Number of HSP's gapped (non-prelim): 9
length of query: 259
length of database: 18,247,518
effective HSP length: 100
effective length of query: 159
effective length of database: 14,460,918
effective search space: 2299285962
effective search space used: 2299285962
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (22.0 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.