Guide to the Human Genome
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Search of human proteins with 21361171

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|21361171 brain and reproductive organ-expressed (TNFRSF1A
modulator) isoform 1 [Homo sapiens]
         (415 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|21361171 brain and reproductive organ-expressed (TNFRSF1A mod...   867   0.0  
gi|40353757 brain and reproductive organ-expressed (TNFRSF1A mod...   754   0.0  
gi|40353755 brain and reproductive organ-expressed (TNFRSF1A mod...   754   0.0  
gi|40353759 brain and reproductive organ-expressed (TNFRSF1A mod...   754   0.0  
gi|40353761 brain and reproductive organ-expressed (TNFRSF1A mod...   754   0.0  
gi|169213977 PREDICTED: hypothetical protein [Homo sapiens]            30   3.1  
gi|169214385 PREDICTED: hypothetical protein [Homo sapiens]            30   3.1  
gi|169213314 PREDICTED: hypothetical protein [Homo sapiens]            30   3.1  
gi|7656955 dopamine receptor D1 interacting protein [Homo sapiens]     30   3.1  
gi|94681049 hypothetical protein LOC80217 [Homo sapiens]               30   3.1  
gi|126012497 dynein, axonemal, heavy polypeptide 8 [Homo sapiens]      30   4.0  
gi|27894339 keratin 23 [Homo sapiens]                                  30   5.3  
gi|148886692 FAT tumor suppressor homolog 3 [Homo sapiens]             30   5.3  
gi|4826964 UV excision repair protein RAD23 homolog A [Homo sapi...    29   9.0  

>gi|21361171 brain and reproductive organ-expressed (TNFRSF1A
           modulator) isoform 1 [Homo sapiens]
          Length = 415

 Score =  867 bits (2240), Expect = 0.0
 Identities = 415/415 (100%), Positives = 415/415 (100%)

Query: 1   MSPEVALNRISPMLSPFISSVVRNGKVGLDATNCLRITDLKSGCTSLTPGPNCDRFKLHI 60
           MSPEVALNRISPMLSPFISSVVRNGKVGLDATNCLRITDLKSGCTSLTPGPNCDRFKLHI
Sbjct: 1   MSPEVALNRISPMLSPFISSVVRNGKVGLDATNCLRITDLKSGCTSLTPGPNCDRFKLHI 60

Query: 61  PYAGETLKWDIIFNAQYPELPPDFIFGEDAEFLPDPSALQNLASWNPSNPECLLLVVKEL 120
           PYAGETLKWDIIFNAQYPELPPDFIFGEDAEFLPDPSALQNLASWNPSNPECLLLVVKEL
Sbjct: 61  PYAGETLKWDIIFNAQYPELPPDFIFGEDAEFLPDPSALQNLASWNPSNPECLLLVVKEL 120

Query: 121 VQQYHQFQCSRLRESSRLMFEYQTLLEEPQYGENMEIYAGKKNNWTGEFSARFLLKLPVD 180
           VQQYHQFQCSRLRESSRLMFEYQTLLEEPQYGENMEIYAGKKNNWTGEFSARFLLKLPVD
Sbjct: 121 VQQYHQFQCSRLRESSRLMFEYQTLLEEPQYGENMEIYAGKKNNWTGEFSARFLLKLPVD 180

Query: 181 FSNIPTYLLKDVNEDPGEDVALLSVSFEDTEATQVYPKLYLSPRIEHALGGSSALHIPAF 240
           FSNIPTYLLKDVNEDPGEDVALLSVSFEDTEATQVYPKLYLSPRIEHALGGSSALHIPAF
Sbjct: 181 FSNIPTYLLKDVNEDPGEDVALLSVSFEDTEATQVYPKLYLSPRIEHALGGSSALHIPAF 240

Query: 241 PGGGCLIDYVPQVCHLLTNKVQYVIQGYHKRREYIAAFLSHFGTGVVEYDAEGFTKLTLL 300
           PGGGCLIDYVPQVCHLLTNKVQYVIQGYHKRREYIAAFLSHFGTGVVEYDAEGFTKLTLL
Sbjct: 241 PGGGCLIDYVPQVCHLLTNKVQYVIQGYHKRREYIAAFLSHFGTGVVEYDAEGFTKLTLL 300

Query: 301 LMWKDFCFLVHIDLPLFFPRDQPTLTFQSVYHFTNSGQLYSQAQKNYPYSPRWDGNEMAK 360
           LMWKDFCFLVHIDLPLFFPRDQPTLTFQSVYHFTNSGQLYSQAQKNYPYSPRWDGNEMAK
Sbjct: 301 LMWKDFCFLVHIDLPLFFPRDQPTLTFQSVYHFTNSGQLYSQAQKNYPYSPRWDGNEMAK 360

Query: 361 RAKGCQGSRDACSPWEQVLAFAVAKTGCKLLQPQRNWPSSRGPPWRASEGERTAQ 415
           RAKGCQGSRDACSPWEQVLAFAVAKTGCKLLQPQRNWPSSRGPPWRASEGERTAQ
Sbjct: 361 RAKGCQGSRDACSPWEQVLAFAVAKTGCKLLQPQRNWPSSRGPPWRASEGERTAQ 415


>gi|40353757 brain and reproductive organ-expressed (TNFRSF1A
           modulator) isoform 2 [Homo sapiens]
          Length = 383

 Score =  754 bits (1948), Expect = 0.0
 Identities = 363/363 (100%), Positives = 363/363 (100%)

Query: 1   MSPEVALNRISPMLSPFISSVVRNGKVGLDATNCLRITDLKSGCTSLTPGPNCDRFKLHI 60
           MSPEVALNRISPMLSPFISSVVRNGKVGLDATNCLRITDLKSGCTSLTPGPNCDRFKLHI
Sbjct: 1   MSPEVALNRISPMLSPFISSVVRNGKVGLDATNCLRITDLKSGCTSLTPGPNCDRFKLHI 60

Query: 61  PYAGETLKWDIIFNAQYPELPPDFIFGEDAEFLPDPSALQNLASWNPSNPECLLLVVKEL 120
           PYAGETLKWDIIFNAQYPELPPDFIFGEDAEFLPDPSALQNLASWNPSNPECLLLVVKEL
Sbjct: 61  PYAGETLKWDIIFNAQYPELPPDFIFGEDAEFLPDPSALQNLASWNPSNPECLLLVVKEL 120

Query: 121 VQQYHQFQCSRLRESSRLMFEYQTLLEEPQYGENMEIYAGKKNNWTGEFSARFLLKLPVD 180
           VQQYHQFQCSRLRESSRLMFEYQTLLEEPQYGENMEIYAGKKNNWTGEFSARFLLKLPVD
Sbjct: 121 VQQYHQFQCSRLRESSRLMFEYQTLLEEPQYGENMEIYAGKKNNWTGEFSARFLLKLPVD 180

Query: 181 FSNIPTYLLKDVNEDPGEDVALLSVSFEDTEATQVYPKLYLSPRIEHALGGSSALHIPAF 240
           FSNIPTYLLKDVNEDPGEDVALLSVSFEDTEATQVYPKLYLSPRIEHALGGSSALHIPAF
Sbjct: 181 FSNIPTYLLKDVNEDPGEDVALLSVSFEDTEATQVYPKLYLSPRIEHALGGSSALHIPAF 240

Query: 241 PGGGCLIDYVPQVCHLLTNKVQYVIQGYHKRREYIAAFLSHFGTGVVEYDAEGFTKLTLL 300
           PGGGCLIDYVPQVCHLLTNKVQYVIQGYHKRREYIAAFLSHFGTGVVEYDAEGFTKLTLL
Sbjct: 241 PGGGCLIDYVPQVCHLLTNKVQYVIQGYHKRREYIAAFLSHFGTGVVEYDAEGFTKLTLL 300

Query: 301 LMWKDFCFLVHIDLPLFFPRDQPTLTFQSVYHFTNSGQLYSQAQKNYPYSPRWDGNEMAK 360
           LMWKDFCFLVHIDLPLFFPRDQPTLTFQSVYHFTNSGQLYSQAQKNYPYSPRWDGNEMAK
Sbjct: 301 LMWKDFCFLVHIDLPLFFPRDQPTLTFQSVYHFTNSGQLYSQAQKNYPYSPRWDGNEMAK 360

Query: 361 RAK 363
           RAK
Sbjct: 361 RAK 363


>gi|40353755 brain and reproductive organ-expressed (TNFRSF1A
           modulator) isoform 3 [Homo sapiens]
          Length = 376

 Score =  754 bits (1948), Expect = 0.0
 Identities = 363/363 (100%), Positives = 363/363 (100%)

Query: 1   MSPEVALNRISPMLSPFISSVVRNGKVGLDATNCLRITDLKSGCTSLTPGPNCDRFKLHI 60
           MSPEVALNRISPMLSPFISSVVRNGKVGLDATNCLRITDLKSGCTSLTPGPNCDRFKLHI
Sbjct: 1   MSPEVALNRISPMLSPFISSVVRNGKVGLDATNCLRITDLKSGCTSLTPGPNCDRFKLHI 60

Query: 61  PYAGETLKWDIIFNAQYPELPPDFIFGEDAEFLPDPSALQNLASWNPSNPECLLLVVKEL 120
           PYAGETLKWDIIFNAQYPELPPDFIFGEDAEFLPDPSALQNLASWNPSNPECLLLVVKEL
Sbjct: 61  PYAGETLKWDIIFNAQYPELPPDFIFGEDAEFLPDPSALQNLASWNPSNPECLLLVVKEL 120

Query: 121 VQQYHQFQCSRLRESSRLMFEYQTLLEEPQYGENMEIYAGKKNNWTGEFSARFLLKLPVD 180
           VQQYHQFQCSRLRESSRLMFEYQTLLEEPQYGENMEIYAGKKNNWTGEFSARFLLKLPVD
Sbjct: 121 VQQYHQFQCSRLRESSRLMFEYQTLLEEPQYGENMEIYAGKKNNWTGEFSARFLLKLPVD 180

Query: 181 FSNIPTYLLKDVNEDPGEDVALLSVSFEDTEATQVYPKLYLSPRIEHALGGSSALHIPAF 240
           FSNIPTYLLKDVNEDPGEDVALLSVSFEDTEATQVYPKLYLSPRIEHALGGSSALHIPAF
Sbjct: 181 FSNIPTYLLKDVNEDPGEDVALLSVSFEDTEATQVYPKLYLSPRIEHALGGSSALHIPAF 240

Query: 241 PGGGCLIDYVPQVCHLLTNKVQYVIQGYHKRREYIAAFLSHFGTGVVEYDAEGFTKLTLL 300
           PGGGCLIDYVPQVCHLLTNKVQYVIQGYHKRREYIAAFLSHFGTGVVEYDAEGFTKLTLL
Sbjct: 241 PGGGCLIDYVPQVCHLLTNKVQYVIQGYHKRREYIAAFLSHFGTGVVEYDAEGFTKLTLL 300

Query: 301 LMWKDFCFLVHIDLPLFFPRDQPTLTFQSVYHFTNSGQLYSQAQKNYPYSPRWDGNEMAK 360
           LMWKDFCFLVHIDLPLFFPRDQPTLTFQSVYHFTNSGQLYSQAQKNYPYSPRWDGNEMAK
Sbjct: 301 LMWKDFCFLVHIDLPLFFPRDQPTLTFQSVYHFTNSGQLYSQAQKNYPYSPRWDGNEMAK 360

Query: 361 RAK 363
           RAK
Sbjct: 361 RAK 363


>gi|40353759 brain and reproductive organ-expressed (TNFRSF1A
           modulator) isoform 3 [Homo sapiens]
          Length = 376

 Score =  754 bits (1948), Expect = 0.0
 Identities = 363/363 (100%), Positives = 363/363 (100%)

Query: 1   MSPEVALNRISPMLSPFISSVVRNGKVGLDATNCLRITDLKSGCTSLTPGPNCDRFKLHI 60
           MSPEVALNRISPMLSPFISSVVRNGKVGLDATNCLRITDLKSGCTSLTPGPNCDRFKLHI
Sbjct: 1   MSPEVALNRISPMLSPFISSVVRNGKVGLDATNCLRITDLKSGCTSLTPGPNCDRFKLHI 60

Query: 61  PYAGETLKWDIIFNAQYPELPPDFIFGEDAEFLPDPSALQNLASWNPSNPECLLLVVKEL 120
           PYAGETLKWDIIFNAQYPELPPDFIFGEDAEFLPDPSALQNLASWNPSNPECLLLVVKEL
Sbjct: 61  PYAGETLKWDIIFNAQYPELPPDFIFGEDAEFLPDPSALQNLASWNPSNPECLLLVVKEL 120

Query: 121 VQQYHQFQCSRLRESSRLMFEYQTLLEEPQYGENMEIYAGKKNNWTGEFSARFLLKLPVD 180
           VQQYHQFQCSRLRESSRLMFEYQTLLEEPQYGENMEIYAGKKNNWTGEFSARFLLKLPVD
Sbjct: 121 VQQYHQFQCSRLRESSRLMFEYQTLLEEPQYGENMEIYAGKKNNWTGEFSARFLLKLPVD 180

Query: 181 FSNIPTYLLKDVNEDPGEDVALLSVSFEDTEATQVYPKLYLSPRIEHALGGSSALHIPAF 240
           FSNIPTYLLKDVNEDPGEDVALLSVSFEDTEATQVYPKLYLSPRIEHALGGSSALHIPAF
Sbjct: 181 FSNIPTYLLKDVNEDPGEDVALLSVSFEDTEATQVYPKLYLSPRIEHALGGSSALHIPAF 240

Query: 241 PGGGCLIDYVPQVCHLLTNKVQYVIQGYHKRREYIAAFLSHFGTGVVEYDAEGFTKLTLL 300
           PGGGCLIDYVPQVCHLLTNKVQYVIQGYHKRREYIAAFLSHFGTGVVEYDAEGFTKLTLL
Sbjct: 241 PGGGCLIDYVPQVCHLLTNKVQYVIQGYHKRREYIAAFLSHFGTGVVEYDAEGFTKLTLL 300

Query: 301 LMWKDFCFLVHIDLPLFFPRDQPTLTFQSVYHFTNSGQLYSQAQKNYPYSPRWDGNEMAK 360
           LMWKDFCFLVHIDLPLFFPRDQPTLTFQSVYHFTNSGQLYSQAQKNYPYSPRWDGNEMAK
Sbjct: 301 LMWKDFCFLVHIDLPLFFPRDQPTLTFQSVYHFTNSGQLYSQAQKNYPYSPRWDGNEMAK 360

Query: 361 RAK 363
           RAK
Sbjct: 361 RAK 363


>gi|40353761 brain and reproductive organ-expressed (TNFRSF1A
           modulator) isoform 2 [Homo sapiens]
          Length = 383

 Score =  754 bits (1948), Expect = 0.0
 Identities = 363/363 (100%), Positives = 363/363 (100%)

Query: 1   MSPEVALNRISPMLSPFISSVVRNGKVGLDATNCLRITDLKSGCTSLTPGPNCDRFKLHI 60
           MSPEVALNRISPMLSPFISSVVRNGKVGLDATNCLRITDLKSGCTSLTPGPNCDRFKLHI
Sbjct: 1   MSPEVALNRISPMLSPFISSVVRNGKVGLDATNCLRITDLKSGCTSLTPGPNCDRFKLHI 60

Query: 61  PYAGETLKWDIIFNAQYPELPPDFIFGEDAEFLPDPSALQNLASWNPSNPECLLLVVKEL 120
           PYAGETLKWDIIFNAQYPELPPDFIFGEDAEFLPDPSALQNLASWNPSNPECLLLVVKEL
Sbjct: 61  PYAGETLKWDIIFNAQYPELPPDFIFGEDAEFLPDPSALQNLASWNPSNPECLLLVVKEL 120

Query: 121 VQQYHQFQCSRLRESSRLMFEYQTLLEEPQYGENMEIYAGKKNNWTGEFSARFLLKLPVD 180
           VQQYHQFQCSRLRESSRLMFEYQTLLEEPQYGENMEIYAGKKNNWTGEFSARFLLKLPVD
Sbjct: 121 VQQYHQFQCSRLRESSRLMFEYQTLLEEPQYGENMEIYAGKKNNWTGEFSARFLLKLPVD 180

Query: 181 FSNIPTYLLKDVNEDPGEDVALLSVSFEDTEATQVYPKLYLSPRIEHALGGSSALHIPAF 240
           FSNIPTYLLKDVNEDPGEDVALLSVSFEDTEATQVYPKLYLSPRIEHALGGSSALHIPAF
Sbjct: 181 FSNIPTYLLKDVNEDPGEDVALLSVSFEDTEATQVYPKLYLSPRIEHALGGSSALHIPAF 240

Query: 241 PGGGCLIDYVPQVCHLLTNKVQYVIQGYHKRREYIAAFLSHFGTGVVEYDAEGFTKLTLL 300
           PGGGCLIDYVPQVCHLLTNKVQYVIQGYHKRREYIAAFLSHFGTGVVEYDAEGFTKLTLL
Sbjct: 241 PGGGCLIDYVPQVCHLLTNKVQYVIQGYHKRREYIAAFLSHFGTGVVEYDAEGFTKLTLL 300

Query: 301 LMWKDFCFLVHIDLPLFFPRDQPTLTFQSVYHFTNSGQLYSQAQKNYPYSPRWDGNEMAK 360
           LMWKDFCFLVHIDLPLFFPRDQPTLTFQSVYHFTNSGQLYSQAQKNYPYSPRWDGNEMAK
Sbjct: 301 LMWKDFCFLVHIDLPLFFPRDQPTLTFQSVYHFTNSGQLYSQAQKNYPYSPRWDGNEMAK 360

Query: 361 RAK 363
           RAK
Sbjct: 361 RAK 363


>gi|169213977 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 277

 Score = 30.4 bits (67), Expect = 3.1
 Identities = 20/57 (35%), Positives = 25/57 (43%), Gaps = 8/57 (14%)

Query: 357 EMAKRAKGCQGSRDACSPWEQVLAFAVAKTGCKLLQPQRNWPSSRGPPWRASEGERT 413
           E ++R + C G  DA SPW Q L +   + G   L      P   GP  R  EG  T
Sbjct: 115 ERSRRCRCCLG--DAASPWAQSLPYTQVQGGRGFL------PEEVGPHQRGQEGAGT 163


>gi|169214385 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 277

 Score = 30.4 bits (67), Expect = 3.1
 Identities = 20/57 (35%), Positives = 25/57 (43%), Gaps = 8/57 (14%)

Query: 357 EMAKRAKGCQGSRDACSPWEQVLAFAVAKTGCKLLQPQRNWPSSRGPPWRASEGERT 413
           E ++R + C G  DA SPW Q L +   + G   L      P   GP  R  EG  T
Sbjct: 115 ERSRRCRCCLG--DAASPWAQSLPYTQVQGGRGFL------PEEVGPHQRGQEGAGT 163


>gi|169213314 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 277

 Score = 30.4 bits (67), Expect = 3.1
 Identities = 20/57 (35%), Positives = 25/57 (43%), Gaps = 8/57 (14%)

Query: 357 EMAKRAKGCQGSRDACSPWEQVLAFAVAKTGCKLLQPQRNWPSSRGPPWRASEGERT 413
           E ++R + C G  DA SPW Q L +   + G   L      P   GP  R  EG  T
Sbjct: 115 ERSRRCRCCLG--DAASPWAQSLPYTQVQGGRGFL------PEEVGPHQRGQEGAGT 163


>gi|7656955 dopamine receptor D1 interacting protein [Homo sapiens]
          Length = 217

 Score = 30.4 bits (67), Expect = 3.1
 Identities = 28/96 (29%), Positives = 38/96 (39%), Gaps = 27/96 (28%)

Query: 314 LPLFFPRD----QPTLTFQSVYHFTNSGQLYSQAQKNYPYSPRWDGNEMAKRAKGCQGSR 369
           +PL  P D    QP L  Q V       QL S  Q+N+P                 +G R
Sbjct: 27  VPLISPLDISQLQPPLPDQVVIKTQTEYQLSSPDQQNFP---------------DLEGQR 71

Query: 370 DACS--------PWEQVLAFAVAKTGCKLLQPQRNW 397
             CS        P  +++AFA+A  GC L+  +  W
Sbjct: 72  LNCSHPEEGRRLPTARMIAFAMALLGCVLIMYKAIW 107


>gi|94681049 hypothetical protein LOC80217 [Homo sapiens]
          Length = 1665

 Score = 30.4 bits (67), Expect = 3.1
 Identities = 14/30 (46%), Positives = 19/30 (63%)

Query: 179 VDFSNIPTYLLKDVNEDPGEDVALLSVSFE 208
           V +SN+P YLL  ++ D G D +LLS   E
Sbjct: 969 VKYSNLPNYLLGSLSTDFGVDTSLLSSQLE 998


>gi|126012497 dynein, axonemal, heavy polypeptide 8 [Homo sapiens]
          Length = 4490

 Score = 30.0 bits (66), Expect = 4.0
 Identities = 20/78 (25%), Positives = 34/78 (43%), Gaps = 3/78 (3%)

Query: 84  FIFGEDAEFLPDPSALQNLASWNPSNPECLLLVVKELVQQYHQFQCSRLRESSRLMFEYQ 143
           F+     + L    ALQ L  +   N  CL L +   +++  Q+  + L  + +L   Y 
Sbjct: 443 FMNSSFGKILSSQQALQLLQRFQKLNIPCLGLEINHTIERILQYYVAELDATKKL---YH 499

Query: 144 TLLEEPQYGENMEIYAGK 161
           +  ++P    NM   AGK
Sbjct: 500 SQKDDPPLARNMPPIAGK 517


>gi|27894339 keratin 23 [Homo sapiens]
          Length = 422

 Score = 29.6 bits (65), Expect = 5.3
 Identities = 17/50 (34%), Positives = 24/50 (48%)

Query: 97  SALQNLASWNPSNPECLLLVVKELVQQYHQFQCSRLRESSRLMFEYQTLL 146
           SAL+N+ S   S   C L  ++E++  Y +       E  R   EYQ LL
Sbjct: 309 SALENMLSETQSRYSCKLQDMQEIISHYEEELTQLRHELERQNNEYQVLL 358


>gi|148886692 FAT tumor suppressor homolog 3 [Homo sapiens]
          Length = 4557

 Score = 29.6 bits (65), Expect = 5.3
 Identities = 24/90 (26%), Positives = 37/90 (41%), Gaps = 5/90 (5%)

Query: 148  EPQYGENMEIYAGKKNNWTGEF-----SARFLLKLPVDFSNIPTYLLKDVNEDPGEDVAL 202
            +P  G   ++     N++ G F     S    L   +D+     Y L    +D G  V+L
Sbjct: 962  DPDLGLGGQVRYSLVNDYNGRFEIDKASGAIRLSKELDYEKQQFYNLTVRAKDKGRPVSL 1021

Query: 203  LSVSFEDTEATQVYPKLYLSPRIEHALGGS 232
             SVSF + E   V   L+     + A+ GS
Sbjct: 1022 SSVSFVEVEVVDVNENLHTPYFPDFAVVGS 1051


>gi|4826964 UV excision repair protein RAD23 homolog A [Homo
           sapiens]
          Length = 363

 Score = 28.9 bits (63), Expect = 9.0
 Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 5/76 (6%)

Query: 75  AQYPELPPDFIFGEDA-EFLPDPSALQNLASWNPSNPECLLLVVKELVQQYHQFQCSRLR 133
           +Q  E P     GE+  EFL D    QN+      NP  L  ++++L Q+  Q     L+
Sbjct: 216 SQVSEQPATEAAGENPLEFLRDQPQFQNMRQVIQQNPALLPALLQQLGQENPQL----LQ 271

Query: 134 ESSRLMFEYQTLLEEP 149
           + SR   ++  +L EP
Sbjct: 272 QISRHQEQFIQMLNEP 287


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.137    0.434 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,697,884
Number of Sequences: 37866
Number of extensions: 841533
Number of successful extensions: 1630
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 1621
Number of HSP's gapped (non-prelim): 15
length of query: 415
length of database: 18,247,518
effective HSP length: 105
effective length of query: 310
effective length of database: 14,271,588
effective search space: 4424192280
effective search space used: 4424192280
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
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