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Search of human proteins with 209976986
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|209976986 PCI domain containing 2 [Homo sapiens]
(399 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|224451003 PCI domain containing 2 [Homo sapiens] 803 0.0
gi|224451001 PCI domain containing 2 [Homo sapiens] 803 0.0
gi|209976986 PCI domain containing 2 [Homo sapiens] 803 0.0
gi|169194708 PREDICTED: similar to eukaryotic translation initia... 36 0.070
gi|169201966 PREDICTED: similar to eukaryotic translation initia... 36 0.070
gi|169192141 PREDICTED: similar to eukaryotic translation initia... 36 0.070
gi|90652861 protein-tyrosine-phosphatase non-receptor 5 isoform ... 32 1.3
gi|90652859 protein-tyrosine-phosphatase non-receptor 5 isoform ... 32 1.3
gi|90652853 protein-tyrosine-phosphatase non-receptor 5 isoform ... 32 1.3
gi|24797153 faciogenital dysplasia protein [Homo sapiens] 31 1.7
>gi|224451003 PCI domain containing 2 [Homo sapiens]
Length = 399
Score = 803 bits (2074), Expect = 0.0
Identities = 399/399 (100%), Positives = 399/399 (100%)
Query: 1 MAHITINQYLQQVYEAIDSRDGASCAELVSFKHPHVANPRLQMASPEEKCQQVLEPPYDE 60
MAHITINQYLQQVYEAIDSRDGASCAELVSFKHPHVANPRLQMASPEEKCQQVLEPPYDE
Sbjct: 1 MAHITINQYLQQVYEAIDSRDGASCAELVSFKHPHVANPRLQMASPEEKCQQVLEPPYDE 60
Query: 61 MFAAHLRCTYAVGNHDFIEAYKCQTVIVQSFLRAFQAHKEENWALPVMYAVALDLRVFAN 120
MFAAHLRCTYAVGNHDFIEAYKCQTVIVQSFLRAFQAHKEENWALPVMYAVALDLRVFAN
Sbjct: 61 MFAAHLRCTYAVGNHDFIEAYKCQTVIVQSFLRAFQAHKEENWALPVMYAVALDLRVFAN 120
Query: 121 NADQQLVKKGKSKVGDMLEKAAELLMSCFRVCASDTRAGIEDSKKWGMLFLVNQLFKIYF 180
NADQQLVKKGKSKVGDMLEKAAELLMSCFRVCASDTRAGIEDSKKWGMLFLVNQLFKIYF
Sbjct: 121 NADQQLVKKGKSKVGDMLEKAAELLMSCFRVCASDTRAGIEDSKKWGMLFLVNQLFKIYF 180
Query: 181 KINKLHLCKPLIRAIDSSNLKDDYSTAQRVTYKYYVGRKAMFDSDFKQAEEYLSFAFEHC 240
KINKLHLCKPLIRAIDSSNLKDDYSTAQRVTYKYYVGRKAMFDSDFKQAEEYLSFAFEHC
Sbjct: 181 KINKLHLCKPLIRAIDSSNLKDDYSTAQRVTYKYYVGRKAMFDSDFKQAEEYLSFAFEHC 240
Query: 241 HRSSQKNKRMILIYLLPVKMLLGHMPTVELLKKYHLMQFAEVTRAVSEGNLLLLHEALAK 300
HRSSQKNKRMILIYLLPVKMLLGHMPTVELLKKYHLMQFAEVTRAVSEGNLLLLHEALAK
Sbjct: 241 HRSSQKNKRMILIYLLPVKMLLGHMPTVELLKKYHLMQFAEVTRAVSEGNLLLLHEALAK 300
Query: 301 HEAFFIRCGIFLILEKLKIITYRNLFKKVYLLLKTHQLSLDAFLVALKFMQVEDVDIDEV 360
HEAFFIRCGIFLILEKLKIITYRNLFKKVYLLLKTHQLSLDAFLVALKFMQVEDVDIDEV
Sbjct: 301 HEAFFIRCGIFLILEKLKIITYRNLFKKVYLLLKTHQLSLDAFLVALKFMQVEDVDIDEV 360
Query: 361 QCILANLIYMGHVKGYISHQHQKLVVSKQNPFPPLSTVC 399
QCILANLIYMGHVKGYISHQHQKLVVSKQNPFPPLSTVC
Sbjct: 361 QCILANLIYMGHVKGYISHQHQKLVVSKQNPFPPLSTVC 399
>gi|224451001 PCI domain containing 2 [Homo sapiens]
Length = 399
Score = 803 bits (2074), Expect = 0.0
Identities = 399/399 (100%), Positives = 399/399 (100%)
Query: 1 MAHITINQYLQQVYEAIDSRDGASCAELVSFKHPHVANPRLQMASPEEKCQQVLEPPYDE 60
MAHITINQYLQQVYEAIDSRDGASCAELVSFKHPHVANPRLQMASPEEKCQQVLEPPYDE
Sbjct: 1 MAHITINQYLQQVYEAIDSRDGASCAELVSFKHPHVANPRLQMASPEEKCQQVLEPPYDE 60
Query: 61 MFAAHLRCTYAVGNHDFIEAYKCQTVIVQSFLRAFQAHKEENWALPVMYAVALDLRVFAN 120
MFAAHLRCTYAVGNHDFIEAYKCQTVIVQSFLRAFQAHKEENWALPVMYAVALDLRVFAN
Sbjct: 61 MFAAHLRCTYAVGNHDFIEAYKCQTVIVQSFLRAFQAHKEENWALPVMYAVALDLRVFAN 120
Query: 121 NADQQLVKKGKSKVGDMLEKAAELLMSCFRVCASDTRAGIEDSKKWGMLFLVNQLFKIYF 180
NADQQLVKKGKSKVGDMLEKAAELLMSCFRVCASDTRAGIEDSKKWGMLFLVNQLFKIYF
Sbjct: 121 NADQQLVKKGKSKVGDMLEKAAELLMSCFRVCASDTRAGIEDSKKWGMLFLVNQLFKIYF 180
Query: 181 KINKLHLCKPLIRAIDSSNLKDDYSTAQRVTYKYYVGRKAMFDSDFKQAEEYLSFAFEHC 240
KINKLHLCKPLIRAIDSSNLKDDYSTAQRVTYKYYVGRKAMFDSDFKQAEEYLSFAFEHC
Sbjct: 181 KINKLHLCKPLIRAIDSSNLKDDYSTAQRVTYKYYVGRKAMFDSDFKQAEEYLSFAFEHC 240
Query: 241 HRSSQKNKRMILIYLLPVKMLLGHMPTVELLKKYHLMQFAEVTRAVSEGNLLLLHEALAK 300
HRSSQKNKRMILIYLLPVKMLLGHMPTVELLKKYHLMQFAEVTRAVSEGNLLLLHEALAK
Sbjct: 241 HRSSQKNKRMILIYLLPVKMLLGHMPTVELLKKYHLMQFAEVTRAVSEGNLLLLHEALAK 300
Query: 301 HEAFFIRCGIFLILEKLKIITYRNLFKKVYLLLKTHQLSLDAFLVALKFMQVEDVDIDEV 360
HEAFFIRCGIFLILEKLKIITYRNLFKKVYLLLKTHQLSLDAFLVALKFMQVEDVDIDEV
Sbjct: 301 HEAFFIRCGIFLILEKLKIITYRNLFKKVYLLLKTHQLSLDAFLVALKFMQVEDVDIDEV 360
Query: 361 QCILANLIYMGHVKGYISHQHQKLVVSKQNPFPPLSTVC 399
QCILANLIYMGHVKGYISHQHQKLVVSKQNPFPPLSTVC
Sbjct: 361 QCILANLIYMGHVKGYISHQHQKLVVSKQNPFPPLSTVC 399
>gi|209976986 PCI domain containing 2 [Homo sapiens]
Length = 399
Score = 803 bits (2074), Expect = 0.0
Identities = 399/399 (100%), Positives = 399/399 (100%)
Query: 1 MAHITINQYLQQVYEAIDSRDGASCAELVSFKHPHVANPRLQMASPEEKCQQVLEPPYDE 60
MAHITINQYLQQVYEAIDSRDGASCAELVSFKHPHVANPRLQMASPEEKCQQVLEPPYDE
Sbjct: 1 MAHITINQYLQQVYEAIDSRDGASCAELVSFKHPHVANPRLQMASPEEKCQQVLEPPYDE 60
Query: 61 MFAAHLRCTYAVGNHDFIEAYKCQTVIVQSFLRAFQAHKEENWALPVMYAVALDLRVFAN 120
MFAAHLRCTYAVGNHDFIEAYKCQTVIVQSFLRAFQAHKEENWALPVMYAVALDLRVFAN
Sbjct: 61 MFAAHLRCTYAVGNHDFIEAYKCQTVIVQSFLRAFQAHKEENWALPVMYAVALDLRVFAN 120
Query: 121 NADQQLVKKGKSKVGDMLEKAAELLMSCFRVCASDTRAGIEDSKKWGMLFLVNQLFKIYF 180
NADQQLVKKGKSKVGDMLEKAAELLMSCFRVCASDTRAGIEDSKKWGMLFLVNQLFKIYF
Sbjct: 121 NADQQLVKKGKSKVGDMLEKAAELLMSCFRVCASDTRAGIEDSKKWGMLFLVNQLFKIYF 180
Query: 181 KINKLHLCKPLIRAIDSSNLKDDYSTAQRVTYKYYVGRKAMFDSDFKQAEEYLSFAFEHC 240
KINKLHLCKPLIRAIDSSNLKDDYSTAQRVTYKYYVGRKAMFDSDFKQAEEYLSFAFEHC
Sbjct: 181 KINKLHLCKPLIRAIDSSNLKDDYSTAQRVTYKYYVGRKAMFDSDFKQAEEYLSFAFEHC 240
Query: 241 HRSSQKNKRMILIYLLPVKMLLGHMPTVELLKKYHLMQFAEVTRAVSEGNLLLLHEALAK 300
HRSSQKNKRMILIYLLPVKMLLGHMPTVELLKKYHLMQFAEVTRAVSEGNLLLLHEALAK
Sbjct: 241 HRSSQKNKRMILIYLLPVKMLLGHMPTVELLKKYHLMQFAEVTRAVSEGNLLLLHEALAK 300
Query: 301 HEAFFIRCGIFLILEKLKIITYRNLFKKVYLLLKTHQLSLDAFLVALKFMQVEDVDIDEV 360
HEAFFIRCGIFLILEKLKIITYRNLFKKVYLLLKTHQLSLDAFLVALKFMQVEDVDIDEV
Sbjct: 301 HEAFFIRCGIFLILEKLKIITYRNLFKKVYLLLKTHQLSLDAFLVALKFMQVEDVDIDEV 360
Query: 361 QCILANLIYMGHVKGYISHQHQKLVVSKQNPFPPLSTVC 399
QCILANLIYMGHVKGYISHQHQKLVVSKQNPFPPLSTVC
Sbjct: 361 QCILANLIYMGHVKGYISHQHQKLVVSKQNPFPPLSTVC 399
>gi|169194708 PREDICTED: similar to eukaryotic translation
initiation factor 3 subunit 6 interacting protein [Homo
sapiens]
Length = 316
Score = 35.8 bits (81), Expect = 0.070
Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 3/88 (3%)
Query: 163 SKKWGMLFLVNQLFKIYFKINKLHLCKPLIRAIDSSNLKDDYSTAQRVTYKYYVGRKAMF 222
+K G L L Q F+I + K H K L+ + L D++ +A V + Y+ + +
Sbjct: 225 AKLAGFLDLTEQEFRIQLPVFK-HKLKNLVWTSSITTLDDEFQSASEVDF--YIDKDMIH 281
Query: 223 DSDFKQAEEYLSFAFEHCHRSSQKNKRM 250
D K A Y +F HR + N+ +
Sbjct: 282 IMDTKVARRYGNFFIRQIHRFEELNRTL 309
>gi|169201966 PREDICTED: similar to eukaryotic translation
initiation factor 3 subunit 6 interacting protein [Homo
sapiens]
Length = 316
Score = 35.8 bits (81), Expect = 0.070
Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 3/88 (3%)
Query: 163 SKKWGMLFLVNQLFKIYFKINKLHLCKPLIRAIDSSNLKDDYSTAQRVTYKYYVGRKAMF 222
+K G L L Q F+I + K H K L+ + L D++ +A V + Y+ + +
Sbjct: 225 AKLAGFLDLTEQEFRIQLPVFK-HKLKNLVWTSSITTLDDEFQSASEVDF--YIDKDMIH 281
Query: 223 DSDFKQAEEYLSFAFEHCHRSSQKNKRM 250
D K A Y +F HR + N+ +
Sbjct: 282 IMDTKVARRYGNFFIRQIHRFEELNRTL 309
>gi|169192141 PREDICTED: similar to eukaryotic translation
initiation factor 3 subunit 6 interacting protein [Homo
sapiens]
Length = 316
Score = 35.8 bits (81), Expect = 0.070
Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 3/88 (3%)
Query: 163 SKKWGMLFLVNQLFKIYFKINKLHLCKPLIRAIDSSNLKDDYSTAQRVTYKYYVGRKAMF 222
+K G L L Q F+I + K H K L+ + L D++ +A V + Y+ + +
Sbjct: 225 AKLAGFLDLTEQEFRIQLPVFK-HKLKNLVWTSSITTLDDEFQSASEVDF--YIDKDMIH 281
Query: 223 DSDFKQAEEYLSFAFEHCHRSSQKNKRM 250
D K A Y +F HR + N+ +
Sbjct: 282 IMDTKVARRYGNFFIRQIHRFEELNRTL 309
>gi|90652861 protein-tyrosine-phosphatase non-receptor 5 isoform b
[Homo sapiens]
Length = 533
Score = 31.6 bits (70), Expect = 1.3
Identities = 14/62 (22%), Positives = 32/62 (51%)
Query: 336 HQLSLDAFLVALKFMQVEDVDIDEVQCILANLIYMGHVKGYISHQHQKLVVSKQNPFPPL 395
H+ +LD FL+ +F ++ +D + + L+ K + + H ++ ++ +P PL
Sbjct: 259 HEKALDPFLLQAEFFEIPMNFVDPKEYDIPGLVRKNRYKTILPNPHSRVCLTSPDPDDPL 318
Query: 396 ST 397
S+
Sbjct: 319 SS 320
>gi|90652859 protein-tyrosine-phosphatase non-receptor 5 isoform a
[Homo sapiens]
Length = 565
Score = 31.6 bits (70), Expect = 1.3
Identities = 14/62 (22%), Positives = 32/62 (51%)
Query: 336 HQLSLDAFLVALKFMQVEDVDIDEVQCILANLIYMGHVKGYISHQHQKLVVSKQNPFPPL 395
H+ +LD FL+ +F ++ +D + + L+ K + + H ++ ++ +P PL
Sbjct: 291 HEKALDPFLLQAEFFEIPMNFVDPKEYDIPGLVRKNRYKTILPNPHSRVCLTSPDPDDPL 350
Query: 396 ST 397
S+
Sbjct: 351 SS 352
>gi|90652853 protein-tyrosine-phosphatase non-receptor 5 isoform a
[Homo sapiens]
Length = 565
Score = 31.6 bits (70), Expect = 1.3
Identities = 14/62 (22%), Positives = 32/62 (51%)
Query: 336 HQLSLDAFLVALKFMQVEDVDIDEVQCILANLIYMGHVKGYISHQHQKLVVSKQNPFPPL 395
H+ +LD FL+ +F ++ +D + + L+ K + + H ++ ++ +P PL
Sbjct: 291 HEKALDPFLLQAEFFEIPMNFVDPKEYDIPGLVRKNRYKTILPNPHSRVCLTSPDPDDPL 350
Query: 396 ST 397
S+
Sbjct: 351 SS 352
>gi|24797153 faciogenital dysplasia protein [Homo sapiens]
Length = 961
Score = 31.2 bits (69), Expect = 1.7
Identities = 40/157 (25%), Positives = 70/157 (44%), Gaps = 23/157 (14%)
Query: 225 DFKQAEEYLSFAFEHCHRSSQKNKRMILIYLLPVKMLLGH-----MPTVELLKKYHLMQF 279
D +++ E ++ A EH + + +K +RM LL V LLG PT EL+K+ H+++
Sbjct: 543 DAQKSLELIATAAEHSNAAIRKMERMHK--LLKVYELLGGEEDIVSPTKELIKEGHILKL 600
Query: 280 AEVTRAVSEGNLLLLHEAL--------AKHEAFFIRCGIFLILEKLKIITYRNLFKKVYL 331
+ + L+L ++ L + F +R I + +LK + NL + +
Sbjct: 601 SAKNGTTQDRYLILFNDRLLYCVPRLRLLGQKFSVRARIDVDGMELKESSNLNLPRTFLV 660
Query: 332 LLKTHQLSLDAFLVALKFMQVEDVDIDEVQCILANLI 368
K L L A + E+ D VQ I + L+
Sbjct: 661 SGKQRSLELQA--------RTEEEKKDWVQAINSTLL 689
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.325 0.137 0.408
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,846,698
Number of Sequences: 37866
Number of extensions: 546008
Number of successful extensions: 1388
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 1382
Number of HSP's gapped (non-prelim): 10
length of query: 399
length of database: 18,247,518
effective HSP length: 104
effective length of query: 295
effective length of database: 14,309,454
effective search space: 4221288930
effective search space used: 4221288930
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.