LOC340947 8285

Name: LOC340947	Sequence: fasta or formatted (316aa)		NCBI GI: 169201966
Description: PREDICTED: similar to eukaryotic translation initiation factor 3 subunit 6 interacting protein		Referenced in: Translation Factors
Other entries for this name: alt mRNA [316aa] PREDICTED: similar to eukaryotic translation initiation factor 3 ... alt mRNA [316aa] PREDICTED: similar to eukaryotic translation initiation factor 3 ...
Composition: Amino acid Percentage Count Longest homopolymer A alanine 3.8 12 1 C cysteine 2.2 7 2 D aspartate 5.1 16 2 E glutamate 5.4 17 2 F phenylalanine 6.6 21 2 G glycine 3.5 11 1 H histidine 3.5 11 1 I isoleucine 5.7 18 1 K lysine 6.3 20 2 L leucine 8.9 28 2 M methionine 4.7 15 2 N asparagine 3.8 12 1 P proline 4.4 14 1 Q glutamine 6.3 20 3 R arginine 6.0 19 2 S serine 6.3 20 2 T threonine 5.4 17 2 V valine 5.7 18 2 W tryptophan 0.6 2 1 Y tyrosine 5.7 18 3			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to eukaryotic translation initia... LOC340947 1.000 PREDICTED: similar to eukaryotic translation initia... LOC340947 1.000 PREDICTED: similar to eukaryotic translation initia... EIF3L 0.751 eukaryotic translation initiation factor 3 subunit 6 ... PCID2 0.018 PCI domain containing 2 PCID2 0.018 PCI domain containing 2 PCID2 0.018 PCI domain containing 2 DNAH8 0.008 dynein, axonemal, heavy polypeptide 8 PTPRB 0.008 protein tyrosine phosphatase, receptor type, B isof... PTPRB 0.008 protein tyrosine phosphatase, receptor type, B isof... KIAA0913 0.005 hypothetical protein LOC23053 USP34 0.005 ubiquitin specific protease 34 CYP2U1 0.005 cytochrome P450, family 2, subfamily U, polypeptide ... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.