Search of human proteins with 209954825

Search of human proteins with 209954825

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|209954825 minichromosome maintenance complex component-like
isoform c [Homo sapiens]
         (590 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|209954825 minichromosome maintenance complex component-like i...  1173   0.0  
gi|209954823 minichromosome maintenance complex component-like i...  1173   0.0  
gi|209954821 minichromosome maintenance complex component-like i...  1173   0.0  
gi|6631095 minichromosome maintenance complex component 3 [Homo ...    39   0.013
gi|19923727 minichromosome maintenance complex component 8 isofo...    31   3.6  
gi|33469924 minichromosome maintenance complex component 8 isofo...    31   3.6  
gi|11967969 ATP-binding cassette sub-family G member 5 [Homo sap...    30   4.8  
gi|122937458 hypothetical protein LOC441027 [Homo sapiens]             30   4.8  
gi|33469919 minichromosome maintenance complex component 4 [Homo...    30   6.2  
gi|33469917 minichromosome maintenance complex component 4 [Homo...    30   6.2  
gi|33469968 minichromosome maintenance complex component 7 isofo...    30   8.1  
gi|33469922 minichromosome maintenance complex component 7 isofo...    30   8.1  

>gi|209954825 minichromosome maintenance complex component-like
           isoform c [Homo sapiens]
          Length = 590

 Score = 1173 bits (3034), Expect = 0.0
 Identities = 590/590 (100%), Positives = 590/590 (100%)

Query: 1   MSNLKMKEAALIYLDRSGGLQKFIDDCKYYNDSKQSYAVYRFKILINPSDVVELDAELGN 60
           MSNLKMKEAALIYLDRSGGLQKFIDDCKYYNDSKQSYAVYRFKILINPSDVVELDAELGN
Sbjct: 1   MSNLKMKEAALIYLDRSGGLQKFIDDCKYYNDSKQSYAVYRFKILINPSDVVELDAELGN 60

Query: 61  HILHQPLKAAEVFQSVCFIAVKTLSLIGQLQTETQINIVLKLTHLPPLPSYGLDLCEFPL 120
           HILHQPLKAAEVFQSVCFIAVKTLSLIGQLQTETQINIVLKLTHLPPLPSYGLDLCEFPL
Sbjct: 61  HILHQPLKAAEVFQSVCFIAVKTLSLIGQLQTETQINIVLKLTHLPPLPSYGLDLCEFPL 120

Query: 121 DYTSQRFYMMQGIVIAMTTITKYTQGARFLCSDEACPLSKGFQYIRVHVPGATESATIRN 180
           DYTSQRFYMMQGIVIAMTTITKYTQGARFLCSDEACPLSKGFQYIRVHVPGATESATIRN
Sbjct: 121 DYTSQRFYMMQGIVIAMTTITKYTQGARFLCSDEACPLSKGFQYIRVHVPGATESATIRN 180

Query: 181 DFLCNLCASSLQEDRKFRVLGDKQIVEIIATKALRAFQGYSNNQPFRFQSLTIFLRDESV 240
           DFLCNLCASSLQEDRKFRVLGDKQIVEIIATKALRAFQGYSNNQPFRFQSLTIFLRDESV
Sbjct: 181 DFLCNLCASSLQEDRKFRVLGDKQIVEIIATKALRAFQGYSNNQPFRFQSLTIFLRDESV 240

Query: 241 NKMNIGNEYKIIGIPTCVKTSQTAVCIEANSITFCNSKVPSGISDNFRCLLSLTSSSCWK 300
           NKMNIGNEYKIIGIPTCVKTSQTAVCIEANSITFCNSKVPSGISDNFRCLLSLTSSSCWK
Sbjct: 241 NKMNIGNEYKIIGIPTCVKTSQTAVCIEANSITFCNSKVPSGISDNFRCLLSLTSSSCWK 300

Query: 301 FTAILANIFASQITPPGTYNLLKLCLLMSLVQTTDRNKELEDCLDILIITSDTLLIDRLL 360
           FTAILANIFASQITPPGTYNLLKLCLLMSLVQTTDRNKELEDCLDILIITSDTLLIDRLL
Sbjct: 301 FTAILANIFASQITPPGTYNLLKLCLLMSLVQTTDRNKELEDCLDILIITSDTLLIDRLL 360

Query: 361 NFSINLVPRGIRHLVSTEIFPTLSRNKYGTGAVSIQAGSALLAKGGICFIGDLASHKKDK 420
           NFSINLVPRGIRHLVSTEIFPTLSRNKYGTGAVSIQAGSALLAKGGICFIGDLASHKKDK
Sbjct: 361 NFSINLVPRGIRHLVSTEIFPTLSRNKYGTGAVSIQAGSALLAKGGICFIGDLASHKKDK 420

Query: 421 LEQLQTVLESRSITVYIPGKKFGEDIDQQMTFPVQCSFWSFVDVDSSSRRNAQKINTLIG 480
           LEQLQTVLESRSITVYIPGKKFGEDIDQQMTFPVQCSFWSFVDVDSSSRRNAQKINTLIG
Sbjct: 421 LEQLQTVLESRSITVYIPGKKFGEDIDQQMTFPVQCSFWSFVDVDSSSRRNAQKINTLIG 480

Query: 481 QMDCSLIPANLVEAFGLLINCNESSPCHPFLPTVQHTLNKAINPEGLFYAASRQFTTEDF 540
           QMDCSLIPANLVEAFGLLINCNESSPCHPFLPTVQHTLNKAINPEGLFYAASRQFTTEDF
Sbjct: 481 QMDCSLIPANLVEAFGLLINCNESSPCHPFLPTVQHTLNKAINPEGLFYAASRQFTTEDF 540

Query: 541 EKLLAFAKNLNVEFSLEAERMTHGYYLASRRIRTGSVCGSKLSASALKYL 590
           EKLLAFAKNLNVEFSLEAERMTHGYYLASRRIRTGSVCGSKLSASALKYL
Sbjct: 541 EKLLAFAKNLNVEFSLEAERMTHGYYLASRRIRTGSVCGSKLSASALKYL 590


>gi|209954823 minichromosome maintenance complex component-like
           isoform b [Homo sapiens]
          Length = 632

 Score = 1173 bits (3034), Expect = 0.0
 Identities = 590/590 (100%), Positives = 590/590 (100%)

Query: 1   MSNLKMKEAALIYLDRSGGLQKFIDDCKYYNDSKQSYAVYRFKILINPSDVVELDAELGN 60
           MSNLKMKEAALIYLDRSGGLQKFIDDCKYYNDSKQSYAVYRFKILINPSDVVELDAELGN
Sbjct: 1   MSNLKMKEAALIYLDRSGGLQKFIDDCKYYNDSKQSYAVYRFKILINPSDVVELDAELGN 60

Query: 61  HILHQPLKAAEVFQSVCFIAVKTLSLIGQLQTETQINIVLKLTHLPPLPSYGLDLCEFPL 120
           HILHQPLKAAEVFQSVCFIAVKTLSLIGQLQTETQINIVLKLTHLPPLPSYGLDLCEFPL
Sbjct: 61  HILHQPLKAAEVFQSVCFIAVKTLSLIGQLQTETQINIVLKLTHLPPLPSYGLDLCEFPL 120

Query: 121 DYTSQRFYMMQGIVIAMTTITKYTQGARFLCSDEACPLSKGFQYIRVHVPGATESATIRN 180
           DYTSQRFYMMQGIVIAMTTITKYTQGARFLCSDEACPLSKGFQYIRVHVPGATESATIRN
Sbjct: 121 DYTSQRFYMMQGIVIAMTTITKYTQGARFLCSDEACPLSKGFQYIRVHVPGATESATIRN 180

Query: 181 DFLCNLCASSLQEDRKFRVLGDKQIVEIIATKALRAFQGYSNNQPFRFQSLTIFLRDESV 240
           DFLCNLCASSLQEDRKFRVLGDKQIVEIIATKALRAFQGYSNNQPFRFQSLTIFLRDESV
Sbjct: 181 DFLCNLCASSLQEDRKFRVLGDKQIVEIIATKALRAFQGYSNNQPFRFQSLTIFLRDESV 240

Query: 241 NKMNIGNEYKIIGIPTCVKTSQTAVCIEANSITFCNSKVPSGISDNFRCLLSLTSSSCWK 300
           NKMNIGNEYKIIGIPTCVKTSQTAVCIEANSITFCNSKVPSGISDNFRCLLSLTSSSCWK
Sbjct: 241 NKMNIGNEYKIIGIPTCVKTSQTAVCIEANSITFCNSKVPSGISDNFRCLLSLTSSSCWK 300

Query: 301 FTAILANIFASQITPPGTYNLLKLCLLMSLVQTTDRNKELEDCLDILIITSDTLLIDRLL 360
           FTAILANIFASQITPPGTYNLLKLCLLMSLVQTTDRNKELEDCLDILIITSDTLLIDRLL
Sbjct: 301 FTAILANIFASQITPPGTYNLLKLCLLMSLVQTTDRNKELEDCLDILIITSDTLLIDRLL 360

Query: 361 NFSINLVPRGIRHLVSTEIFPTLSRNKYGTGAVSIQAGSALLAKGGICFIGDLASHKKDK 420
           NFSINLVPRGIRHLVSTEIFPTLSRNKYGTGAVSIQAGSALLAKGGICFIGDLASHKKDK
Sbjct: 361 NFSINLVPRGIRHLVSTEIFPTLSRNKYGTGAVSIQAGSALLAKGGICFIGDLASHKKDK 420

Query: 421 LEQLQTVLESRSITVYIPGKKFGEDIDQQMTFPVQCSFWSFVDVDSSSRRNAQKINTLIG 480
           LEQLQTVLESRSITVYIPGKKFGEDIDQQMTFPVQCSFWSFVDVDSSSRRNAQKINTLIG
Sbjct: 421 LEQLQTVLESRSITVYIPGKKFGEDIDQQMTFPVQCSFWSFVDVDSSSRRNAQKINTLIG 480

Query: 481 QMDCSLIPANLVEAFGLLINCNESSPCHPFLPTVQHTLNKAINPEGLFYAASRQFTTEDF 540
           QMDCSLIPANLVEAFGLLINCNESSPCHPFLPTVQHTLNKAINPEGLFYAASRQFTTEDF
Sbjct: 481 QMDCSLIPANLVEAFGLLINCNESSPCHPFLPTVQHTLNKAINPEGLFYAASRQFTTEDF 540

Query: 541 EKLLAFAKNLNVEFSLEAERMTHGYYLASRRIRTGSVCGSKLSASALKYL 590
           EKLLAFAKNLNVEFSLEAERMTHGYYLASRRIRTGSVCGSKLSASALKYL
Sbjct: 541 EKLLAFAKNLNVEFSLEAERMTHGYYLASRRIRTGSVCGSKLSASALKYL 590


>gi|209954821 minichromosome maintenance complex component-like
           isoform a [Homo sapiens]
          Length = 681

 Score = 1173 bits (3034), Expect = 0.0
 Identities = 590/590 (100%), Positives = 590/590 (100%)

Query: 1   MSNLKMKEAALIYLDRSGGLQKFIDDCKYYNDSKQSYAVYRFKILINPSDVVELDAELGN 60
           MSNLKMKEAALIYLDRSGGLQKFIDDCKYYNDSKQSYAVYRFKILINPSDVVELDAELGN
Sbjct: 1   MSNLKMKEAALIYLDRSGGLQKFIDDCKYYNDSKQSYAVYRFKILINPSDVVELDAELGN 60

Query: 61  HILHQPLKAAEVFQSVCFIAVKTLSLIGQLQTETQINIVLKLTHLPPLPSYGLDLCEFPL 120
           HILHQPLKAAEVFQSVCFIAVKTLSLIGQLQTETQINIVLKLTHLPPLPSYGLDLCEFPL
Sbjct: 61  HILHQPLKAAEVFQSVCFIAVKTLSLIGQLQTETQINIVLKLTHLPPLPSYGLDLCEFPL 120

Query: 121 DYTSQRFYMMQGIVIAMTTITKYTQGARFLCSDEACPLSKGFQYIRVHVPGATESATIRN 180
           DYTSQRFYMMQGIVIAMTTITKYTQGARFLCSDEACPLSKGFQYIRVHVPGATESATIRN
Sbjct: 121 DYTSQRFYMMQGIVIAMTTITKYTQGARFLCSDEACPLSKGFQYIRVHVPGATESATIRN 180

Query: 181 DFLCNLCASSLQEDRKFRVLGDKQIVEIIATKALRAFQGYSNNQPFRFQSLTIFLRDESV 240
           DFLCNLCASSLQEDRKFRVLGDKQIVEIIATKALRAFQGYSNNQPFRFQSLTIFLRDESV
Sbjct: 181 DFLCNLCASSLQEDRKFRVLGDKQIVEIIATKALRAFQGYSNNQPFRFQSLTIFLRDESV 240

Query: 241 NKMNIGNEYKIIGIPTCVKTSQTAVCIEANSITFCNSKVPSGISDNFRCLLSLTSSSCWK 300
           NKMNIGNEYKIIGIPTCVKTSQTAVCIEANSITFCNSKVPSGISDNFRCLLSLTSSSCWK
Sbjct: 241 NKMNIGNEYKIIGIPTCVKTSQTAVCIEANSITFCNSKVPSGISDNFRCLLSLTSSSCWK 300

Query: 301 FTAILANIFASQITPPGTYNLLKLCLLMSLVQTTDRNKELEDCLDILIITSDTLLIDRLL 360
           FTAILANIFASQITPPGTYNLLKLCLLMSLVQTTDRNKELEDCLDILIITSDTLLIDRLL
Sbjct: 301 FTAILANIFASQITPPGTYNLLKLCLLMSLVQTTDRNKELEDCLDILIITSDTLLIDRLL 360

Query: 361 NFSINLVPRGIRHLVSTEIFPTLSRNKYGTGAVSIQAGSALLAKGGICFIGDLASHKKDK 420
           NFSINLVPRGIRHLVSTEIFPTLSRNKYGTGAVSIQAGSALLAKGGICFIGDLASHKKDK
Sbjct: 361 NFSINLVPRGIRHLVSTEIFPTLSRNKYGTGAVSIQAGSALLAKGGICFIGDLASHKKDK 420

Query: 421 LEQLQTVLESRSITVYIPGKKFGEDIDQQMTFPVQCSFWSFVDVDSSSRRNAQKINTLIG 480
           LEQLQTVLESRSITVYIPGKKFGEDIDQQMTFPVQCSFWSFVDVDSSSRRNAQKINTLIG
Sbjct: 421 LEQLQTVLESRSITVYIPGKKFGEDIDQQMTFPVQCSFWSFVDVDSSSRRNAQKINTLIG 480

Query: 481 QMDCSLIPANLVEAFGLLINCNESSPCHPFLPTVQHTLNKAINPEGLFYAASRQFTTEDF 540
           QMDCSLIPANLVEAFGLLINCNESSPCHPFLPTVQHTLNKAINPEGLFYAASRQFTTEDF
Sbjct: 481 QMDCSLIPANLVEAFGLLINCNESSPCHPFLPTVQHTLNKAINPEGLFYAASRQFTTEDF 540

Query: 541 EKLLAFAKNLNVEFSLEAERMTHGYYLASRRIRTGSVCGSKLSASALKYL 590
           EKLLAFAKNLNVEFSLEAERMTHGYYLASRRIRTGSVCGSKLSASALKYL
Sbjct: 541 EKLLAFAKNLNVEFSLEAERMTHGYYLASRRIRTGSVCGSKLSASALKYL 590


>gi|6631095 minichromosome maintenance complex component 3 [Homo
           sapiens]
          Length = 808

 Score = 38.9 bits (89), Expect = 0.013
 Identities = 48/228 (21%), Positives = 86/228 (37%), Gaps = 30/228 (13%)

Query: 229 QSLTIFLRDESVNKMNIGNEYKIIGIPTCVK------TSQT--AVCIEANSITFCNSKVP 280
           +S+ + L D+ V+K   G+  +++G   C+       TS T   V I  N         P
Sbjct: 215 RSVDVILDDDLVDKAKPGDRVQVVGTYRCLPGKKGGYTSGTFRTVLIACNVKQMSKDAQP 274

Query: 281 SGISDNFRCLLSLTSSSCWKFTAILANIFASQITPPGTYNLLKLCLLMSLVQTTDRN-KE 339
           S  +++   +   + +        LA   A  I          LCLL+  V+    N   
Sbjct: 275 SFSAEDIAKIKKFSKTRSKDIFDQLAKSLAPSIHGHDYVKKAILCLLLGGVERDLENGSH 334

Query: 340 LEDCLDILIITSDTLLIDRLLNFSINLVPRGIRHLVSTEIFPTLSRNKYGTGAVS----- 394
           +   ++IL+I   ++   +LL + +   PR I         PT  R   G G  +     
Sbjct: 335 IRGDINILLIGDPSVAKSQLLRYVLCTAPRAI---------PTTGRGSSGVGLTAAVTTD 385

Query: 395 -------IQAGSALLAKGGICFIGDLASHKKDKLEQLQTVLESRSITV 435
                  ++AG+ +LA  G+  I +           +  V+E   +T+
Sbjct: 386 QETGERRLEAGAMVLADRGVVCIDEFDKMSDMDRTAIHEVMEQGRVTI 433


>gi|19923727 minichromosome maintenance complex component 8 isoform
           1 [Homo sapiens]
          Length = 840

 Score = 30.8 bits (68), Expect = 3.6
 Identities = 25/90 (27%), Positives = 47/90 (52%), Gaps = 11/90 (12%)

Query: 346 ILIITSDTLLIDRLLNFSINLVPRGI----RHLVSTEIFPTLSRNKYGTGAVSIQAGSAL 401
           IL++    L   ++L  + N+ PRG+        ++ +  TLS++   +G  +++AG+ +
Sbjct: 450 ILVVGDPGLGKSQMLQAACNVAPRGVYVCGNTTTTSGLTVTLSKDS-SSGDFALEAGALV 508

Query: 402 LAKGGICFIGDLASHKKDKL-EQLQTVLES 430
           L   GIC I +      DK+  Q Q +LE+
Sbjct: 509 LGDQGICGIDEF-----DKMGNQHQALLEA 533


>gi|33469924 minichromosome maintenance complex component 8 isoform
           2 [Homo sapiens]
          Length = 824

 Score = 30.8 bits (68), Expect = 3.6
 Identities = 25/90 (27%), Positives = 47/90 (52%), Gaps = 11/90 (12%)

Query: 346 ILIITSDTLLIDRLLNFSINLVPRGI----RHLVSTEIFPTLSRNKYGTGAVSIQAGSAL 401
           IL++    L   ++L  + N+ PRG+        ++ +  TLS++   +G  +++AG+ +
Sbjct: 434 ILVVGDPGLGKSQMLQAACNVAPRGVYVCGNTTTTSGLTVTLSKDS-SSGDFALEAGALV 492

Query: 402 LAKGGICFIGDLASHKKDKL-EQLQTVLES 430
           L   GIC I +      DK+  Q Q +LE+
Sbjct: 493 LGDQGICGIDEF-----DKMGNQHQALLEA 517


>gi|11967969 ATP-binding cassette sub-family G member 5 [Homo
           sapiens]
          Length = 651

 Score = 30.4 bits (67), Expect = 4.8
 Identities = 23/107 (21%), Positives = 46/107 (42%), Gaps = 12/107 (11%)

Query: 83  TLSLIGQLQTETQINIVLKLTHLPPL---PSYGLDLCEFPLDYTSQRFYMMQGIVIAMTT 139
           TL L+G +Q    +N V+ L  +  +     +  ++ E P+ +    ++  Q     +  
Sbjct: 517 TLVLLGIVQNPNIVNSVVALLSIAGVLVGSGFLRNIQEMPIPFKIISYFTFQKYCSEILV 576

Query: 140 ITKYTQGARFLC--------SDEACPLSKGFQYIRVHVPGATESATI 178
           + ++  G  F C        ++  C  ++G Q+I    PGAT   T+
Sbjct: 577 VNEF-YGLNFTCGSSNVSVTTNPMCAFTQGIQFIEKTCPGATSRFTM 622


>gi|122937458 hypothetical protein LOC441027 [Homo sapiens]
          Length = 249

 Score = 30.4 bits (67), Expect = 4.8
 Identities = 13/42 (30%), Positives = 25/42 (59%)

Query: 226 FRFQSLTIFLRDESVNKMNIGNEYKIIGIPTCVKTSQTAVCI 267
           F F +LT +++     K+NI NE + +GIP  + ++   +C+
Sbjct: 137 FGFGTLTCWIQAALTLKVNIKNEGRRVGIPRVILSASITLCV 178


>gi|33469919 minichromosome maintenance complex component 4 [Homo
           sapiens]
          Length = 863

 Score = 30.0 bits (66), Expect = 6.2
 Identities = 23/97 (23%), Positives = 43/97 (44%), Gaps = 7/97 (7%)

Query: 344 LDILIITSDTLLIDRLLNFSINLVPRGIRHLVSTEIFPTLSRNKY-----GTGAVSIQAG 398
           ++IL+         +LL +  NLVPRG     S +    +    Y      T  + +Q G
Sbjct: 504 INILLCGDPGTSKSQLLQYVYNLVPRG--QYTSGKGSSAVGLTAYVMKDPETRQLVLQTG 561

Query: 399 SALLAKGGICFIGDLASHKKDKLEQLQTVLESRSITV 435
           + +L+  GIC I +     +     L  V+E +++++
Sbjct: 562 ALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSI 598


>gi|33469917 minichromosome maintenance complex component 4 [Homo
           sapiens]
          Length = 863

 Score = 30.0 bits (66), Expect = 6.2
 Identities = 23/97 (23%), Positives = 43/97 (44%), Gaps = 7/97 (7%)

Query: 344 LDILIITSDTLLIDRLLNFSINLVPRGIRHLVSTEIFPTLSRNKY-----GTGAVSIQAG 398
           ++IL+         +LL +  NLVPRG     S +    +    Y      T  + +Q G
Sbjct: 504 INILLCGDPGTSKSQLLQYVYNLVPRG--QYTSGKGSSAVGLTAYVMKDPETRQLVLQTG 561

Query: 399 SALLAKGGICFIGDLASHKKDKLEQLQTVLESRSITV 435
           + +L+  GIC I +     +     L  V+E +++++
Sbjct: 562 ALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSI 598


>gi|33469968 minichromosome maintenance complex component 7 isoform
           1 [Homo sapiens]
          Length = 719

 Score = 29.6 bits (65), Expect = 8.1
 Identities = 23/116 (19%), Positives = 54/116 (46%), Gaps = 5/116 (4%)

Query: 324 LCLLMSLVQTTDRNKELEDCLDILIITSDTLLIDRLLNFSINLVPRGI----RHLVSTEI 379
           L LL+  V  + R  ++   ++I ++    +   +LL++   L PR      R      +
Sbjct: 355 LLLLVGGVDQSPRGMKIRGNINICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGL 414

Query: 380 FPTLSRNKYGTGAVSIQAGSALLAKGGICFIGDLASHKKDKLEQLQTVLESRSITV 435
              + R+   +G ++++ G+ +LA  G+C I +     +     +  V+E ++I++
Sbjct: 415 TAAVLRDSV-SGELTLEGGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISI 469


>gi|33469922 minichromosome maintenance complex component 7 isoform
           2 [Homo sapiens]
          Length = 543

 Score = 29.6 bits (65), Expect = 8.1
 Identities = 23/116 (19%), Positives = 54/116 (46%), Gaps = 5/116 (4%)

Query: 324 LCLLMSLVQTTDRNKELEDCLDILIITSDTLLIDRLLNFSINLVPRGI----RHLVSTEI 379
           L LL+  V  + R  ++   ++I ++    +   +LL++   L PR      R      +
Sbjct: 179 LLLLVGGVDQSPRGMKIRGNINICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGL 238

Query: 380 FPTLSRNKYGTGAVSIQAGSALLAKGGICFIGDLASHKKDKLEQLQTVLESRSITV 435
              + R+   +G ++++ G+ +LA  G+C I +     +     +  V+E ++I++
Sbjct: 239 TAAVLRDSV-SGELTLEGGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISI 293


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.322    0.136    0.399 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,899,016
Number of Sequences: 37866
Number of extensions: 805162
Number of successful extensions: 1641
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 1635
Number of HSP's gapped (non-prelim): 12
length of query: 590
length of database: 18,247,518
effective HSP length: 108
effective length of query: 482
effective length of database: 14,157,990
effective search space: 6824151180
effective search space used: 6824151180
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.