Search of human proteins with 209954680

Search of human proteins with 209954680

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|209954680 hypothetical protein LOC644974 [Homo sapiens]
         (215 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|209954680 hypothetical protein LOC644974 [Homo sapiens]            443   e-125
gi|41350216 beta-1,4-mannosyltransferase [Homo sapiens]               357   4e-99
gi|239755575 PREDICTED: similar to mannosyltransferase, partial ...   332   2e-91
gi|62632744 asparagine-linked glycosylation 1-like [Homo sapiens]     175   3e-44
gi|31377468 dedicator of cytokinesis 2 [Homo sapiens]                  31   0.70 
gi|31563503 activity-dependent neuroprotector [Homo sapiens]           28   5.9  
gi|12229217 activity-dependent neuroprotector [Homo sapiens]           28   5.9  
gi|194239643 activating transcription factor 7 isoform 3 [Homo s...    28   7.7  
gi|5802980 activating transcription factor 7 isoform 2 [Homo sap...    28   7.7  
gi|194239640 activating transcription factor 7 isoform 1 [Homo s...    28   7.7  
gi|197276594 RNA binding motif protein 20 [Homo sapiens]               28   7.7  

>gi|209954680 hypothetical protein LOC644974 [Homo sapiens]
          Length = 215

 Score =  443 bits (1139), Expect = e-125
 Identities = 215/215 (100%), Positives = 215/215 (100%)

Query: 1   MGATAGWAVTVYDKPASFFKEAPLDLQHRLFMKLGSTHSPFRARSEPEDPDTERSAFTER 60
           MGATAGWAVTVYDKPASFFKEAPLDLQHRLFMKLGSTHSPFRARSEPEDPDTERSAFTER
Sbjct: 1   MGATAGWAVTVYDKPASFFKEAPLDLQHRLFMKLGSTHSPFRARSEPEDPDTERSAFTER 60

Query: 61  DSGSGLVTRLHERPALLVSSTSWTEFEQLTLDGQNLPSLVCVITGKGPLREYYSRLIHQK 120
           DSGSGLVTRLHERPALLVSSTSWTEFEQLTLDGQNLPSLVCVITGKGPLREYYSRLIHQK
Sbjct: 61  DSGSGLVTRLHERPALLVSSTSWTEFEQLTLDGQNLPSLVCVITGKGPLREYYSRLIHQK 120

Query: 121 HFQHIQVCIPWLEGRGLPPLLGSVDLDVCLDTSSSGLDLPMKVVDMFRCCLPACAVNFKC 180
           HFQHIQVCIPWLEGRGLPPLLGSVDLDVCLDTSSSGLDLPMKVVDMFRCCLPACAVNFKC
Sbjct: 121 HFQHIQVCIPWLEGRGLPPLLGSVDLDVCLDTSSSGLDLPMKVVDMFRCCLPACAVNFKC 180

Query: 181 LHELVKHEENRLVFEDSEELAAQLQYFADAFLKLS 215
           LHELVKHEENRLVFEDSEELAAQLQYFADAFLKLS
Sbjct: 181 LHELVKHEENRLVFEDSEELAAQLQYFADAFLKLS 215


>gi|41350216 beta-1,4-mannosyltransferase [Homo sapiens]
          Length = 464

 Score =  357 bits (916), Expect = 4e-99
 Identities = 181/217 (83%), Positives = 182/217 (83%), Gaps = 13/217 (5%)

Query: 8   AVTVYDKPASFFKEAPLDLQHRLFMKLGSTHSPFRARSEPEDPDTERSAFTERDSGSGLV 67
           AVTVYDKPASFFKE PLDLQHRLFMKLGS HSPFRARSEPEDP TERSAFTERD+GSGLV
Sbjct: 211 AVTVYDKPASFFKETPLDLQHRLFMKLGSMHSPFRARSEPEDPVTERSAFTERDAGSGLV 270

Query: 68  TRLHERPALLVSSTSWTE-------------FEQLTLDGQNLPSLVCVITGKGPLREYYS 114
           TRL ERPALLVSSTSWTE             FEQLTLDG NLPSLVCVITGKGPLREYYS
Sbjct: 271 TRLRERPALLVSSTSWTEDEDFSILLAALEKFEQLTLDGHNLPSLVCVITGKGPLREYYS 330

Query: 115 RLIHQKHFQHIQVCIPWLEGRGLPPLLGSVDLDVCLDTSSSGLDLPMKVVDMFRCCLPAC 174
           RLIHQKHFQHIQVC PWLE    P LLGS DL VCL TSSSGLDLPMKVVDMF CCLP C
Sbjct: 331 RLIHQKHFQHIQVCTPWLEAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCCLPVC 390

Query: 175 AVNFKCLHELVKHEENRLVFEDSEELAAQLQYFADAF 211
           AVNFKCLHELVKHEEN LVFEDSEELAAQLQ     F
Sbjct: 391 AVNFKCLHELVKHEENGLVFEDSEELAAQLQMLFSNF 427


>gi|239755575 PREDICTED: similar to mannosyltransferase, partial
           [Homo sapiens]
          Length = 256

 Score =  332 bits (850), Expect = 2e-91
 Identities = 169/217 (77%), Positives = 175/217 (80%), Gaps = 13/217 (5%)

Query: 8   AVTVYDKPASFFKEAPLDLQHRLFMKLGSTHSPFRARSEPEDPDTERSAFTERDSGSGLV 67
           AVT+YDKPASFFKE PLDLQHRLFMKLG THSPFRARSEPE+P TE SAF E D+GSGLV
Sbjct: 3   AVTIYDKPASFFKETPLDLQHRLFMKLGGTHSPFRARSEPEEPATEPSAFMEWDAGSGLV 62

Query: 68  TRLHERPALLVSSTSWTE-------------FEQLTLDGQNLPSLVCVITGKGPLREYYS 114
             L E+PALLVSST WTE             FEQLT+DG NLPSLVCVITG+GPL EYYS
Sbjct: 63  MLLREQPALLVSSTGWTEDEDFSILLAALEKFEQLTVDGHNLPSLVCVITGQGPLTEYYS 122

Query: 115 RLIHQKHFQHIQVCIPWLEGRGLPPLLGSVDLDVCLDTSSSGLDLPMKVVDMFRCCLPAC 174
             IHQKHFQHIQVC PWLE    P LLGSVDL VCL TSSSGLDLPMKVVDMF CCLPAC
Sbjct: 123 CPIHQKHFQHIQVCNPWLEAEDYPLLLGSVDLGVCLHTSSSGLDLPMKVVDMFGCCLPAC 182

Query: 175 AVNFKCLHELVKHEENRLVFEDSEELAAQLQYFADAF 211
           AVNFKCLHELVKHEEN LVFEDSEELAAQLQ     F
Sbjct: 183 AVNFKCLHELVKHEENGLVFEDSEELAAQLQMLFSNF 219


>gi|62632744 asparagine-linked glycosylation 1-like [Homo sapiens]
          Length = 187

 Score =  175 bits (443), Expect = 3e-44
 Identities = 98/157 (62%), Positives = 101/157 (64%), Gaps = 37/157 (23%)

Query: 53  ERSAFTERDSGSGLVTRLHERPALLVSSTSWTEFEQLTLDGQNLPSLVCVITGKGPLREY 112
           ERSAF E D+GS LV  L E PALLVSST WTEFEQLTLDG NLPSLVCVIT        
Sbjct: 2   ERSAFMELDAGSRLVMHLREWPALLVSSTGWTEFEQLTLDGHNLPSLVCVIT-------- 53

Query: 113 YSRLIHQKHFQHIQVCIPWLEGRGLPPLLGSVDLDVCLDTSSSGLDLPMKVVDMFRCCLP 172
                                        GSVDL VCL  SSSGLDLPMKVVDMF CCLP
Sbjct: 54  -----------------------------GSVDLGVCLHMSSSGLDLPMKVVDMFGCCLP 84

Query: 173 ACAVNFKCLHELVKHEENRLVFEDSEELAAQLQYFAD 209
            CAVNFKCLHELVKHEEN LVFEDSEELAA    F++
Sbjct: 85  VCAVNFKCLHELVKHEENGLVFEDSEELAALQMLFSN 121


>gi|31377468 dedicator of cytokinesis 2 [Homo sapiens]
          Length = 1830

 Score = 31.2 bits (69), Expect = 0.70
 Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 4/43 (9%)

Query: 92  DGQNLPSLVCVITGKGPLREYYSRLIHQ----KHFQHIQVCIP 130
           DG+ LP+ +CV  G  P+ EY S + +Q    +  + ++V +P
Sbjct: 456 DGKTLPNAICVGAGDKPMNEYRSVVYYQVKQPRWMETVKVAVP 498


>gi|31563503 activity-dependent neuroprotector [Homo sapiens]
          Length = 1102

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 2/43 (4%)

Query: 104 TGKGPLREYYSRLIHQKHFQHIQVCIPWLEGRGLPPLLGSVDL 146
           T + PL E   + I+++HFQH  V  P++   G   L G+V L
Sbjct: 171 TYRDPLYEIVRKHIYREHFQH--VAAPYIAKAGEKSLNGAVPL 211


>gi|12229217 activity-dependent neuroprotector [Homo sapiens]
          Length = 1102

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 2/43 (4%)

Query: 104 TGKGPLREYYSRLIHQKHFQHIQVCIPWLEGRGLPPLLGSVDL 146
           T + PL E   + I+++HFQH  V  P++   G   L G+V L
Sbjct: 171 TYRDPLYEIVRKHIYREHFQH--VAAPYIAKAGEKSLNGAVPL 211


>gi|194239643 activating transcription factor 7 isoform 3 [Homo
           sapiens]
          Length = 462

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 3/62 (4%)

Query: 42  RARSEPEDPDTERSAFTERDSGSGLVTRLHERPALLVSSTSWTEFEQLTLDGQNLPSLVC 101
           R R+  EDPD  R  F ER+  +   +R  ++  L VSS    + E+LT     L + V 
Sbjct: 302 RRRTVDEDPDERRQRFLERNRAA--ASRCRQKRKLWVSSLE-KKAEELTSQNIQLSNEVT 358

Query: 102 VI 103
           ++
Sbjct: 359 LL 360


>gi|5802980 activating transcription factor 7 isoform 2 [Homo
           sapiens]
          Length = 483

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 3/62 (4%)

Query: 42  RARSEPEDPDTERSAFTERDSGSGLVTRLHERPALLVSSTSWTEFEQLTLDGQNLPSLVC 101
           R R+  EDPD  R  F ER+  +   +R  ++  L VSS    + E+LT     L + V 
Sbjct: 323 RRRTVDEDPDERRQRFLERNRAA--ASRCRQKRKLWVSSLE-KKAEELTSQNIQLSNEVT 379

Query: 102 VI 103
           ++
Sbjct: 380 LL 381


>gi|194239640 activating transcription factor 7 isoform 1 [Homo
           sapiens]
          Length = 494

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 3/62 (4%)

Query: 42  RARSEPEDPDTERSAFTERDSGSGLVTRLHERPALLVSSTSWTEFEQLTLDGQNLPSLVC 101
           R R+  EDPD  R  F ER+  +   +R  ++  L VSS    + E+LT     L + V 
Sbjct: 334 RRRTVDEDPDERRQRFLERNRAA--ASRCRQKRKLWVSSLE-KKAEELTSQNIQLSNEVT 390

Query: 102 VI 103
           ++
Sbjct: 391 LL 392


>gi|197276594 RNA binding motif protein 20 [Homo sapiens]
          Length = 1227

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 13/44 (29%), Positives = 23/44 (52%)

Query: 117 IHQKHFQHIQVCIPWLEGRGLPPLLGSVDLDVCLDTSSSGLDLP 160
           +H K   H Q C+ + E  G+  +LGS +  +C   +S+ +  P
Sbjct: 429 LHVKGKLHAQKCLVFSENAGIRCILGSAEGTLCASPNSTAVYNP 472


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.322    0.137    0.424 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,941,949
Number of Sequences: 37866
Number of extensions: 421764
Number of successful extensions: 975
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 965
Number of HSP's gapped (non-prelim): 13
length of query: 215
length of database: 18,247,518
effective HSP length: 98
effective length of query: 117
effective length of database: 14,536,650
effective search space: 1700788050
effective search space used: 1700788050
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.