Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Search of human proteins with 20149680

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|20149680 fructosamine 3 kinase related protein [Homo
sapiens]
         (309 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|20149680 fructosamine 3 kinase related protein [Homo sapiens]      635   0.0  
gi|11545906 fructosamine 3 kinase [Homo sapiens]                      423   e-118
gi|197116389 transmembrane protein 106B [Homo sapiens]                 31   1.6  
gi|40254893 transmembrane protein 106B [Homo sapiens]                  31   1.6  
gi|156766047 GRB10 interacting GYF protein 2 isoform c [Homo sap...    30   3.5  
gi|156766045 GRB10 interacting GYF protein 2 isoform a [Homo sap...    30   3.5  
gi|156766043 GRB10 interacting GYF protein 2 isoform b [Homo sap...    30   3.5  
gi|42476299 GRB10 interacting GYF protein 2 isoform b [Homo sapi...    30   3.5  
gi|4502427 bone morphogenetic protein 7 precursor [Homo sapiens]       28   7.9  
gi|118026942 zinc finger protein Cezanne [Homo sapiens]                28   7.9  

>gi|20149680 fructosamine 3 kinase related protein [Homo sapiens]
          Length = 309

 Score =  635 bits (1638), Expect = 0.0
 Identities = 309/309 (100%), Positives = 309/309 (100%)

Query: 1   MEELLRRELGCSSVRATGHSGGGCISQGRSYDTDQGRVFVKVNPKAEARRMFEGEMASLT 60
           MEELLRRELGCSSVRATGHSGGGCISQGRSYDTDQGRVFVKVNPKAEARRMFEGEMASLT
Sbjct: 1   MEELLRRELGCSSVRATGHSGGGCISQGRSYDTDQGRVFVKVNPKAEARRMFEGEMASLT 60

Query: 61  AILKTNTVKVPKPIKVLDAPGGGSVLVMEHMDMRHLSSHAAKLGAQLADLHLDNKKLGEM 120
           AILKTNTVKVPKPIKVLDAPGGGSVLVMEHMDMRHLSSHAAKLGAQLADLHLDNKKLGEM
Sbjct: 61  AILKTNTVKVPKPIKVLDAPGGGSVLVMEHMDMRHLSSHAAKLGAQLADLHLDNKKLGEM 120

Query: 121 RLKEAGTVGRGGGQEERPFVARFGFDVVTCCGYLPQVNDWQEDWVVFYARQRIQPQMDMV 180
           RLKEAGTVGRGGGQEERPFVARFGFDVVTCCGYLPQVNDWQEDWVVFYARQRIQPQMDMV
Sbjct: 121 RLKEAGTVGRGGGQEERPFVARFGFDVVTCCGYLPQVNDWQEDWVVFYARQRIQPQMDMV 180

Query: 181 EKESGDREALQLWSALQLKIPDLFRDLEIIPALLHGDLWGGNVAEDSSGPVIFDPASFYG 240
           EKESGDREALQLWSALQLKIPDLFRDLEIIPALLHGDLWGGNVAEDSSGPVIFDPASFYG
Sbjct: 181 EKESGDREALQLWSALQLKIPDLFRDLEIIPALLHGDLWGGNVAEDSSGPVIFDPASFYG 240

Query: 241 HSEYELAIAGMFGGFSSSFYSAYHGKIPKAPGFEKRLQLYQLFHYLNHWNHFGSGYRGSS 300
           HSEYELAIAGMFGGFSSSFYSAYHGKIPKAPGFEKRLQLYQLFHYLNHWNHFGSGYRGSS
Sbjct: 241 HSEYELAIAGMFGGFSSSFYSAYHGKIPKAPGFEKRLQLYQLFHYLNHWNHFGSGYRGSS 300

Query: 301 LNIMRNLVK 309
           LNIMRNLVK
Sbjct: 301 LNIMRNLVK 309


>gi|11545906 fructosamine 3 kinase [Homo sapiens]
          Length = 309

 Score =  423 bits (1087), Expect = e-118
 Identities = 199/309 (64%), Positives = 245/309 (79%)

Query: 1   MEELLRRELGCSSVRATGHSGGGCISQGRSYDTDQGRVFVKVNPKAEARRMFEGEMASLT 60
           ME+LLR EL  +++RA G  G GCIS+GR+YDTD G VFVKVN + +AR+MFEGE+ASL 
Sbjct: 1   MEQLLRAELRTATLRAFGGPGAGCISEGRAYDTDAGPVFVKVNRRTQARQMFEGEVASLE 60

Query: 61  AILKTNTVKVPKPIKVLDAPGGGSVLVMEHMDMRHLSSHAAKLGAQLADLHLDNKKLGEM 120
           A+  T  V+VP+P+KV+D PGGG+  VMEH+ M+ LSS A+KLG Q+ADLHL N+KL E 
Sbjct: 61  ALRSTGLVRVPRPMKVIDLPGGGAAFVMEHLKMKSLSSQASKLGEQMADLHLYNQKLREK 120

Query: 121 RLKEAGTVGRGGGQEERPFVARFGFDVVTCCGYLPQVNDWQEDWVVFYARQRIQPQMDMV 180
             +E  TVGR G   E  +V +FGF  VTCCG++PQVN+WQ+DW  F+AR R+Q Q+D++
Sbjct: 121 LKEEENTVGRRGEGAEPQYVDKFGFHTVTCCGFIPQVNEWQDDWPTFFARHRLQAQLDLI 180

Query: 181 EKESGDREALQLWSALQLKIPDLFRDLEIIPALLHGDLWGGNVAEDSSGPVIFDPASFYG 240
           EK+  DREA +LWS LQ+KIPDLF  LEI+PALLHGDLW GNVAED  GP+I+DPASFYG
Sbjct: 181 EKDYADREARELWSRLQVKIPDLFCGLEIVPALLHGDLWSGNVAEDDVGPIIYDPASFYG 240

Query: 241 HSEYELAIAGMFGGFSSSFYSAYHGKIPKAPGFEKRLQLYQLFHYLNHWNHFGSGYRGSS 300
           HSE+ELAIA MFGGF  SF++AYH KIPKAPGF++RL LYQLF+YLNHWNHFG  YR  S
Sbjct: 241 HSEFELAIALMFGGFPRSFFTAYHRKIPKAPGFDQRLLLYQLFNYLNHWNHFGREYRSPS 300

Query: 301 LNIMRNLVK 309
           L  MR L+K
Sbjct: 301 LGTMRRLLK 309


>gi|197116389 transmembrane protein 106B [Homo sapiens]
          Length = 274

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 24/89 (26%), Positives = 43/89 (48%), Gaps = 6/89 (6%)

Query: 93  MRHLSSHAAKLGAQLADLHLDNKKLGEMRLKEAGTVGRGGGQEERPFVARFGFDVVTC-- 150
           + HL  H++K  A    +  +N + G +  +     GR G   + P+V   G D VTC  
Sbjct: 5   LSHLPLHSSKEDAY-DGVTSENMRNGLVNSEVHNEDGRNGDVSQFPYVEFTGRDSVTCPT 63

Query: 151 ---CGYLPQVNDWQEDWVVFYARQRIQPQ 176
               G +P+  + Q   ++ Y+ QR++P+
Sbjct: 64  CQGTGRIPRGQENQLVALIPYSDQRLRPR 92


>gi|40254893 transmembrane protein 106B [Homo sapiens]
          Length = 274

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 24/89 (26%), Positives = 43/89 (48%), Gaps = 6/89 (6%)

Query: 93  MRHLSSHAAKLGAQLADLHLDNKKLGEMRLKEAGTVGRGGGQEERPFVARFGFDVVTC-- 150
           + HL  H++K  A    +  +N + G +  +     GR G   + P+V   G D VTC  
Sbjct: 5   LSHLPLHSSKEDAY-DGVTSENMRNGLVNSEVHNEDGRNGDVSQFPYVEFTGRDSVTCPT 63

Query: 151 ---CGYLPQVNDWQEDWVVFYARQRIQPQ 176
               G +P+  + Q   ++ Y+ QR++P+
Sbjct: 64  CQGTGRIPRGQENQLVALIPYSDQRLRPR 92


>gi|156766047 GRB10 interacting GYF protein 2 isoform c [Homo
           sapiens]
          Length = 1293

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 2/49 (4%)

Query: 71  PKPIKVLDAPGGGSVLVM--EHMDMRHLSSHAAKLGAQLADLHLDNKKL 117
           P    V+ APG GSV     +   ++HL   A K+ A L D  LD+++L
Sbjct: 458 PVETPVVGAPGMGSVSTEPDDEEGLKHLEQQAEKMVAYLQDSALDDERL 506


>gi|156766045 GRB10 interacting GYF protein 2 isoform a [Homo
           sapiens]
          Length = 1320

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 2/49 (4%)

Query: 71  PKPIKVLDAPGGGSVLVM--EHMDMRHLSSHAAKLGAQLADLHLDNKKL 117
           P    V+ APG GSV     +   ++HL   A K+ A L D  LD+++L
Sbjct: 485 PVETPVVGAPGMGSVSTEPDDEEGLKHLEQQAEKMVAYLQDSALDDERL 533


>gi|156766043 GRB10 interacting GYF protein 2 isoform b [Homo
           sapiens]
          Length = 1299

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 2/49 (4%)

Query: 71  PKPIKVLDAPGGGSVLVM--EHMDMRHLSSHAAKLGAQLADLHLDNKKL 117
           P    V+ APG GSV     +   ++HL   A K+ A L D  LD+++L
Sbjct: 464 PVETPVVGAPGMGSVSTEPDDEEGLKHLEQQAEKMVAYLQDSALDDERL 512


>gi|42476299 GRB10 interacting GYF protein 2 isoform b [Homo
           sapiens]
          Length = 1299

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 2/49 (4%)

Query: 71  PKPIKVLDAPGGGSVLVM--EHMDMRHLSSHAAKLGAQLADLHLDNKKL 117
           P    V+ APG GSV     +   ++HL   A K+ A L D  LD+++L
Sbjct: 464 PVETPVVGAPGMGSVSTEPDDEEGLKHLEQQAEKMVAYLQDSALDDERL 512


>gi|4502427 bone morphogenetic protein 7 precursor [Homo sapiens]
          Length = 431

 Score = 28.5 bits (62), Expect = 7.9
 Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 3/41 (7%)

Query: 103 LGAQLADLHLDNKKLGEMRLKEAGTVGRGGGQEERPFVARF 143
           LG QL+   LD + +     K AG +GR G Q ++PF+  F
Sbjct: 243 LGLQLSVETLDGQSINP---KLAGLIGRHGPQNKQPFMVAF 280


>gi|118026942 zinc finger protein Cezanne [Homo sapiens]
          Length = 843

 Score = 28.5 bits (62), Expect = 7.9
 Identities = 22/88 (25%), Positives = 35/88 (39%), Gaps = 19/88 (21%)

Query: 98  SHAAKLGAQLADLHLDNKKLGEMRLKEAGTVGRGGGQEERPFVARFGFDVVTCCGYLPQV 157
           SHA+     LA  H+ +              G GGG  E P       ++  C   LP +
Sbjct: 100 SHASSSIVSLARSHVSSN-------------GGGGGSNEHPL------EMPICAFQLPDL 140

Query: 158 NDWQEDWVVFYARQRIQPQMDMVEKESG 185
             + ED+  F  R  I+  M +  +++G
Sbjct: 141 TVYNEDFRSFIERDLIEQSMLVALEQAG 168


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.138    0.423 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,482,254
Number of Sequences: 37866
Number of extensions: 560373
Number of successful extensions: 1181
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 1175
Number of HSP's gapped (non-prelim): 14
length of query: 309
length of database: 18,247,518
effective HSP length: 102
effective length of query: 207
effective length of database: 14,385,186
effective search space: 2977733502
effective search space used: 2977733502
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press