Guide to the Human Genome
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Name: CYHR1 Sequence: fasta or formatted (192aa) NCBI GI: 193788637
Description:

cysteine/histidine-rich 1 isoform 2

Referenced in:

Lectin Families

Other entries for this name:
alt mRNA [192aa] cysteine/histidine-rich 1 isoform 2
alt prot [362aa] cysteine/histidine-rich 1 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            16.1         31           3
 C cysteine            1.6          3           1
 D aspartate           2.6          5           1
 E glutamate           4.2          8           2
 F phenylalanine       2.1          4           1
 G glycine            11.5         22           3
 H histidine           3.1          6           1
 I isoleucine          1.6          3           1
 K lysine              1.0          2           1
 L leucine            16.7         32           4
 M methionine          2.6          5           1
 N asparagine          1.6          3           1
 P proline             3.1          6           1
 Q glutamine           2.1          4           1
 R arginine            4.2          8           1
 S serine              5.7         11           2
 T threonine           5.7         11           3
 V valine              9.9         19           2
 W tryptophan          3.6          7           1
 Y tyrosine            1.0          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cysteine/histidine-rich 1 isoform 2 
CYHR1                 1.000   cysteine/histidine-rich 1 isoform 2 
CYHR1                 0.396   cysteine/histidine-rich 1 isoform 1 
SLC34A3               0.014   solute carrier family 34 (sodium phosphate), member ...
TARBP1                0.011   TAR RNA binding protein 1 
SLC45A3               0.008   prostein 
ATR                   0.008   ataxia telangiectasia and Rad3 related protein [Hom...
LOC651921             0.008   PREDICTED: similar to ataxia telangiectasia and Rad...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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