BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|189163485 cathepsin A isoform b precursor [Homo sapiens] (480 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|119395729 cathepsin A isoform a precursor [Homo sapiens] 996 0.0 gi|189163485 cathepsin A isoform b precursor [Homo sapiens] 996 0.0 gi|83641876 serine carboxypeptidase vitellogenic-like [Homo sapi... 187 2e-47 gi|83641874 serine carboxypeptidase vitellogenic-like [Homo sapi... 187 2e-47 gi|11055992 serine carboxypeptidase 1 precursor [Homo sapiens] 86 6e-17 gi|222831575 solute carrier organic anion transporter family, me... 32 0.98 gi|222831573 solute carrier organic anion transporter family, me... 32 0.98 gi|148226214 t-complex 11 isoform 1 [Homo sapiens] 30 3.7 gi|8924256 t-complex 11 isoform 2 [Homo sapiens] 30 3.7 gi|4557239 acetylcholinesterase isoform E4-E6 precursor [Homo sa... 30 6.3 gi|7710112 acetylcholinesterase isoform E4-E5 precursor [Homo sa... 30 6.3 gi|239753385 PREDICTED: hypothetical protein XP_002345632 [Homo ... 29 8.3 gi|239747954 PREDICTED: hypothetical protein XP_002346502 [Homo ... 29 8.3 gi|239741849 PREDICTED: hypothetical protein XP_002342341 [Homo ... 29 8.3 >gi|119395729 cathepsin A isoform a precursor [Homo sapiens] Length = 498 Score = 996 bits (2575), Expect = 0.0 Identities = 480/480 (100%), Positives = 480/480 (100%) Query: 1 MIRAAPPPLFLLLLLLLLLVSWASRGEAAPDQDEIQRLPGLAKQPSFRQYSGYLKGSGSK 60 MIRAAPPPLFLLLLLLLLLVSWASRGEAAPDQDEIQRLPGLAKQPSFRQYSGYLKGSGSK Sbjct: 19 MIRAAPPPLFLLLLLLLLLVSWASRGEAAPDQDEIQRLPGLAKQPSFRQYSGYLKGSGSK 78 Query: 61 HLHYWFVESQKDPENSPVVLWLNGGPGCSSLDGLLTEHGPFLVQPDGVTLEYNPYSWNLI 120 HLHYWFVESQKDPENSPVVLWLNGGPGCSSLDGLLTEHGPFLVQPDGVTLEYNPYSWNLI Sbjct: 79 HLHYWFVESQKDPENSPVVLWLNGGPGCSSLDGLLTEHGPFLVQPDGVTLEYNPYSWNLI 138 Query: 121 ANVLYLESPAGVGFSYSDDKFYATNDTEVAQSNFEALQDFFRLFPEYKNNKLFLTGESYA 180 ANVLYLESPAGVGFSYSDDKFYATNDTEVAQSNFEALQDFFRLFPEYKNNKLFLTGESYA Sbjct: 139 ANVLYLESPAGVGFSYSDDKFYATNDTEVAQSNFEALQDFFRLFPEYKNNKLFLTGESYA 198 Query: 181 GIYIPTLAVLVMQDPSMNLQGLAVGNGLSSYEQNDNSLVYFAYYHGLLGNRLWSSLQTHC 240 GIYIPTLAVLVMQDPSMNLQGLAVGNGLSSYEQNDNSLVYFAYYHGLLGNRLWSSLQTHC Sbjct: 199 GIYIPTLAVLVMQDPSMNLQGLAVGNGLSSYEQNDNSLVYFAYYHGLLGNRLWSSLQTHC 258 Query: 241 CSQNKCNFYDNKDLECVTNLQEVARIVGNSGLNIYNLYAPCAGGVPSHFRYEKDTVVVQD 300 CSQNKCNFYDNKDLECVTNLQEVARIVGNSGLNIYNLYAPCAGGVPSHFRYEKDTVVVQD Sbjct: 259 CSQNKCNFYDNKDLECVTNLQEVARIVGNSGLNIYNLYAPCAGGVPSHFRYEKDTVVVQD 318 Query: 301 LGNIFTRLPLKRMWHQALLRSGDKVRMDPPCTNTTAASTYLNNPYVRKALNIPEQLPQWD 360 LGNIFTRLPLKRMWHQALLRSGDKVRMDPPCTNTTAASTYLNNPYVRKALNIPEQLPQWD Sbjct: 319 LGNIFTRLPLKRMWHQALLRSGDKVRMDPPCTNTTAASTYLNNPYVRKALNIPEQLPQWD 378 Query: 361 MCNFLVNLQYRRLYRSMNSQYLKLLSSQKYQILLYNGDVDMACNFMGDEWFVDSLNQKME 420 MCNFLVNLQYRRLYRSMNSQYLKLLSSQKYQILLYNGDVDMACNFMGDEWFVDSLNQKME Sbjct: 379 MCNFLVNLQYRRLYRSMNSQYLKLLSSQKYQILLYNGDVDMACNFMGDEWFVDSLNQKME 438 Query: 421 VQRRPWLVKYGDSGEQIAGFVKEFSHIAFLTIKGAGHMVPTDKPLAAFTMFSRFLNKQPY 480 VQRRPWLVKYGDSGEQIAGFVKEFSHIAFLTIKGAGHMVPTDKPLAAFTMFSRFLNKQPY Sbjct: 439 VQRRPWLVKYGDSGEQIAGFVKEFSHIAFLTIKGAGHMVPTDKPLAAFTMFSRFLNKQPY 498 >gi|189163485 cathepsin A isoform b precursor [Homo sapiens] Length = 480 Score = 996 bits (2575), Expect = 0.0 Identities = 480/480 (100%), Positives = 480/480 (100%) Query: 1 MIRAAPPPLFLLLLLLLLLVSWASRGEAAPDQDEIQRLPGLAKQPSFRQYSGYLKGSGSK 60 MIRAAPPPLFLLLLLLLLLVSWASRGEAAPDQDEIQRLPGLAKQPSFRQYSGYLKGSGSK Sbjct: 1 MIRAAPPPLFLLLLLLLLLVSWASRGEAAPDQDEIQRLPGLAKQPSFRQYSGYLKGSGSK 60 Query: 61 HLHYWFVESQKDPENSPVVLWLNGGPGCSSLDGLLTEHGPFLVQPDGVTLEYNPYSWNLI 120 HLHYWFVESQKDPENSPVVLWLNGGPGCSSLDGLLTEHGPFLVQPDGVTLEYNPYSWNLI Sbjct: 61 HLHYWFVESQKDPENSPVVLWLNGGPGCSSLDGLLTEHGPFLVQPDGVTLEYNPYSWNLI 120 Query: 121 ANVLYLESPAGVGFSYSDDKFYATNDTEVAQSNFEALQDFFRLFPEYKNNKLFLTGESYA 180 ANVLYLESPAGVGFSYSDDKFYATNDTEVAQSNFEALQDFFRLFPEYKNNKLFLTGESYA Sbjct: 121 ANVLYLESPAGVGFSYSDDKFYATNDTEVAQSNFEALQDFFRLFPEYKNNKLFLTGESYA 180 Query: 181 GIYIPTLAVLVMQDPSMNLQGLAVGNGLSSYEQNDNSLVYFAYYHGLLGNRLWSSLQTHC 240 GIYIPTLAVLVMQDPSMNLQGLAVGNGLSSYEQNDNSLVYFAYYHGLLGNRLWSSLQTHC Sbjct: 181 GIYIPTLAVLVMQDPSMNLQGLAVGNGLSSYEQNDNSLVYFAYYHGLLGNRLWSSLQTHC 240 Query: 241 CSQNKCNFYDNKDLECVTNLQEVARIVGNSGLNIYNLYAPCAGGVPSHFRYEKDTVVVQD 300 CSQNKCNFYDNKDLECVTNLQEVARIVGNSGLNIYNLYAPCAGGVPSHFRYEKDTVVVQD Sbjct: 241 CSQNKCNFYDNKDLECVTNLQEVARIVGNSGLNIYNLYAPCAGGVPSHFRYEKDTVVVQD 300 Query: 301 LGNIFTRLPLKRMWHQALLRSGDKVRMDPPCTNTTAASTYLNNPYVRKALNIPEQLPQWD 360 LGNIFTRLPLKRMWHQALLRSGDKVRMDPPCTNTTAASTYLNNPYVRKALNIPEQLPQWD Sbjct: 301 LGNIFTRLPLKRMWHQALLRSGDKVRMDPPCTNTTAASTYLNNPYVRKALNIPEQLPQWD 360 Query: 361 MCNFLVNLQYRRLYRSMNSQYLKLLSSQKYQILLYNGDVDMACNFMGDEWFVDSLNQKME 420 MCNFLVNLQYRRLYRSMNSQYLKLLSSQKYQILLYNGDVDMACNFMGDEWFVDSLNQKME Sbjct: 361 MCNFLVNLQYRRLYRSMNSQYLKLLSSQKYQILLYNGDVDMACNFMGDEWFVDSLNQKME 420 Query: 421 VQRRPWLVKYGDSGEQIAGFVKEFSHIAFLTIKGAGHMVPTDKPLAAFTMFSRFLNKQPY 480 VQRRPWLVKYGDSGEQIAGFVKEFSHIAFLTIKGAGHMVPTDKPLAAFTMFSRFLNKQPY Sbjct: 421 VQRRPWLVKYGDSGEQIAGFVKEFSHIAFLTIKGAGHMVPTDKPLAAFTMFSRFLNKQPY 480 >gi|83641876 serine carboxypeptidase vitellogenic-like [Homo sapiens] Length = 476 Score = 187 bits (475), Expect = 2e-47 Identities = 131/459 (28%), Positives = 225/459 (49%), Gaps = 81/459 (17%) Query: 39 PGLAKQPSFRQYSGYL--KGSGSKHLHYWFVESQKDPENSPVVLWLNGGPGCSSLDGLLT 96 PGL + + Y+G+L + + +L +WF +Q PE++PVVLWL GGPG SS+ GL Sbjct: 67 PGL----NMKSYAGFLTVNKTYNSNLFFWFFPAQIQPEDAPVVLWLQGGPGGSSMFGLFV 122 Query: 97 EHGPFLVQPDGVTLEYNPYSWNLIANVLYLESPAGVGFSYSDDKF-YATNDTEVAQSNFE 155 EHGP++V + +TL + W ++LY+++P G GFS++DD YA N+ +VA+ + Sbjct: 123 EHGPYVVTSN-MTLRDRDFPWTTTLSMLYIDNPVGTGFSFTDDTHGYAVNEDDVARDLYS 181 Query: 156 ALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLV-----MQDPSMNLQGLAVGNGLSS 210 AL FF++FPEYKNN ++TGESYAG Y+P +A L+ +++ +NL G+A+G+G S Sbjct: 182 ALIQFFQIFPEYKNNDFYVTGESYAGKYVPAIAHLIHSLNPVREVKINLNGIAIGDGYSD 241 Query: 211 YEQNDNSLVYFAYYHGLLGNRLWSSLQTHCCSQNKCNFYDNKDLECVTNLQEVARIVGNS 270 E F Y GLL + Q C EC+ ++++ + Sbjct: 242 PESIIGGYAEFLYQIGLLDEKQKKYFQKQC-------------HECIEHIRK------QN 282 Query: 271 GLNIYNLYAPCAGG----VPSHFRYEKDTVVVQDLGNIFTRLPLKRMWHQALLRSGDKVR 326 + + G PS+F+ V N + L Sbjct: 283 WFEAFEILDKLLDGDLTSDPSYFQN------VTGCSNYYNFL------------------ 318 Query: 327 MDPPCTNTTAASTY---LNNPYVRKALNIPEQLPQWDMCNFLVNLQYRRLYRSMNSQYLK 383 CT Y L+ P VR+A+++ Q ++ + +S+ + Sbjct: 319 ---RCTEPEDQLYYVKFLSLPEVRQAIHVGNQ--TFNDGTIVEKYLREDTVQSVKPWLTE 373 Query: 384 LLSSQKYQILLYNGDVDMAC-------NFMGDEWFVDSLNQKMEVQRRPWLVKYGDSGEQ 436 ++++ K +L+YNG +D+ + MG +W + + +++ W + DS + Sbjct: 374 IMNNYK--VLIYNGQLDIIVAAALTERSLMGMDW--KGSQEYKKAEKKVWKIFKSDS--E 427 Query: 437 IAGFVKEFSHIAFLTIKGAGHMVPTDKPLAAFTMFSRFL 475 +AG++++ + I+G GH++P D+PL AF M +RF+ Sbjct: 428 VAGYIRQAGDFHQVIIRGGGHILPYDQPLRAFDMINRFI 466 >gi|83641874 serine carboxypeptidase vitellogenic-like [Homo sapiens] Length = 476 Score = 187 bits (475), Expect = 2e-47 Identities = 131/459 (28%), Positives = 225/459 (49%), Gaps = 81/459 (17%) Query: 39 PGLAKQPSFRQYSGYL--KGSGSKHLHYWFVESQKDPENSPVVLWLNGGPGCSSLDGLLT 96 PGL + + Y+G+L + + +L +WF +Q PE++PVVLWL GGPG SS+ GL Sbjct: 67 PGL----NMKSYAGFLTVNKTYNSNLFFWFFPAQIQPEDAPVVLWLQGGPGGSSMFGLFV 122 Query: 97 EHGPFLVQPDGVTLEYNPYSWNLIANVLYLESPAGVGFSYSDDKF-YATNDTEVAQSNFE 155 EHGP++V + +TL + W ++LY+++P G GFS++DD YA N+ +VA+ + Sbjct: 123 EHGPYVVTSN-MTLRDRDFPWTTTLSMLYIDNPVGTGFSFTDDTHGYAVNEDDVARDLYS 181 Query: 156 ALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLV-----MQDPSMNLQGLAVGNGLSS 210 AL FF++FPEYKNN ++TGESYAG Y+P +A L+ +++ +NL G+A+G+G S Sbjct: 182 ALIQFFQIFPEYKNNDFYVTGESYAGKYVPAIAHLIHSLNPVREVKINLNGIAIGDGYSD 241 Query: 211 YEQNDNSLVYFAYYHGLLGNRLWSSLQTHCCSQNKCNFYDNKDLECVTNLQEVARIVGNS 270 E F Y GLL + Q C EC+ ++++ + Sbjct: 242 PESIIGGYAEFLYQIGLLDEKQKKYFQKQC-------------HECIEHIRK------QN 282 Query: 271 GLNIYNLYAPCAGG----VPSHFRYEKDTVVVQDLGNIFTRLPLKRMWHQALLRSGDKVR 326 + + G PS+F+ V N + L Sbjct: 283 WFEAFEILDKLLDGDLTSDPSYFQN------VTGCSNYYNFL------------------ 318 Query: 327 MDPPCTNTTAASTY---LNNPYVRKALNIPEQLPQWDMCNFLVNLQYRRLYRSMNSQYLK 383 CT Y L+ P VR+A+++ Q ++ + +S+ + Sbjct: 319 ---RCTEPEDQLYYVKFLSLPEVRQAIHVGNQ--TFNDGTIVEKYLREDTVQSVKPWLTE 373 Query: 384 LLSSQKYQILLYNGDVDMAC-------NFMGDEWFVDSLNQKMEVQRRPWLVKYGDSGEQ 436 ++++ K +L+YNG +D+ + MG +W + + +++ W + DS + Sbjct: 374 IMNNYK--VLIYNGQLDIIVAAALTERSLMGMDW--KGSQEYKKAEKKVWKIFKSDS--E 427 Query: 437 IAGFVKEFSHIAFLTIKGAGHMVPTDKPLAAFTMFSRFL 475 +AG++++ + I+G GH++P D+PL AF M +RF+ Sbjct: 428 VAGYIRQAGDFHQVIIRGGGHILPYDQPLRAFDMINRFI 466 >gi|11055992 serine carboxypeptidase 1 precursor [Homo sapiens] Length = 452 Score = 86.3 bits (212), Expect = 6e-17 Identities = 116/495 (23%), Positives = 194/495 (39%), Gaps = 81/495 (16%) Query: 2 IRAAPPPLFLLLLLLLL------LVSWASRGEAAPDQDEIQRLPGLAKQPSFRQYSGYLK 55 +R +P P +LLLL LLL ++ W + ++ Y+ Sbjct: 5 LRRSPVPRWLLLLPLLLGLNAGAVIDWPTE--------------------EGKEVWDYVT 44 Query: 56 GSGSKHLHYWF---VESQKDPENSPVVLWLNGGPGCSSLD-GLLTEHGPFLVQPDGVTLE 111 ++ +W S K+ P+V+WL GGPG SS G E GP L+ Sbjct: 45 VRKDAYMFWWLYYATNSCKNFSELPLVMWLQGGPGGSSTGFGNFEEIGPL-----DSDLK 99 Query: 112 YNPYSWNLIANVLYLESPAGVGFSY-SDDKFYATNDTEVAQSNFEALQDFFRLFPEYKNN 170 +W A++L++++P G GFSY + YA + VA L+ FF E++ Sbjct: 100 PRKTTWLQAASLLFVDNPVGTGFSYVNGSGAYAKDLAMVASDMMVLLKTFFSCHKEFQTV 159 Query: 171 KLFLTGESY-----AGIYIPTLAVLVMQDPSMNLQGLAVGNGLSSYEQNDNSLVYFAYYH 225 ++ ESY AGI + + N G+A+G+ S + S + Y Sbjct: 160 PFYIFSESYGGKMAAGIGLELYKAIQRGTIKCNFAGVALGDSWISPVDSVLSWGPYLYSM 219 Query: 226 GLLGNRLWSSLQTHCCSQNKCNFYDNKDLECVTNLQEVARIV---GNSGLNIYNLYAPC- 281 LL ++ + ++ N + T L A ++ G+N YN+ Sbjct: 220 SLLEDK--GLAEVSKVAEQVLNAVNKGLYREATELWGKAEMIIEQNTDGVNFYNILTKST 277 Query: 282 -AGGVPSHFRYEKDTVVVQDLGNIFTRLPLKRMWHQALLRSGDKVRMDPPCTNTTAASTY 340 + S + + +V L + + H A S Sbjct: 278 PTSTMESSLEFTQSHLVC---------LCQRHVRH----------------LQRDALSQL 312 Query: 341 LNNPYVRKALNIPEQLPQW--DMCNFLVNLQYRRLYRSMNSQYLKLLSSQKYQILLYNGD 398 +N P +RK L I + W N VN++ + + S +LL + + +YNG Sbjct: 313 MNGP-IRKKLKIIPEDQSWGGQATNVFVNME-EDFMKPVISIVDELLEA-GINVTVYNGQ 369 Query: 399 VDMACNFMGDEWFVDSLN--QKMEVQRRPWLVKYGD-SGEQIAGFVKEFSHIAFLTIKGA 455 +D+ + MG E +V L + + + W Y D + + FVK + ++AF I A Sbjct: 370 LDLIVDTMGQEAWVRKLKWPELPKFSQLKWKALYSDPKSLETSAFVKSYKNLAFYWILKA 429 Query: 456 GHMVPTDKPLAAFTM 470 GHMVP+D+ A M Sbjct: 430 GHMVPSDQGDMALKM 444 >gi|222831575 solute carrier organic anion transporter family, member 3A1 isoform 1 [Homo sapiens] Length = 710 Score = 32.3 bits (72), Expect = 0.98 Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 9/72 (12%) Query: 167 YKNNKLFLTGE-------SYAGIYIPTLAVLVMQDPSMNLQGLAVGNGLSSYEQNDNSLV 219 + N K+FL E G Y+ ++VL + NLQ VG SS+E + +L+ Sbjct: 36 FSNIKIFLVSECALMLAQGTVGAYL--VSVLTTLERRFNLQSADVGVIASSFEIGNLALI 93 Query: 220 YFAYYHGLLGNR 231 F Y G G+R Sbjct: 94 LFVSYFGARGHR 105 >gi|222831573 solute carrier organic anion transporter family, member 3A1 isoform 2 [Homo sapiens] Length = 692 Score = 32.3 bits (72), Expect = 0.98 Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 9/72 (12%) Query: 167 YKNNKLFLTGE-------SYAGIYIPTLAVLVMQDPSMNLQGLAVGNGLSSYEQNDNSLV 219 + N K+FL E G Y+ ++VL + NLQ VG SS+E + +L+ Sbjct: 36 FSNIKIFLVSECALMLAQGTVGAYL--VSVLTTLERRFNLQSADVGVIASSFEIGNLALI 93 Query: 220 YFAYYHGLLGNR 231 F Y G G+R Sbjct: 94 LFVSYFGARGHR 105 >gi|148226214 t-complex 11 isoform 1 [Homo sapiens] Length = 516 Score = 30.4 bits (67), Expect = 3.7 Identities = 30/113 (26%), Positives = 48/113 (42%), Gaps = 13/113 (11%) Query: 318 LLRSGDKVRMDPPCTNTTAASTYLNNPYVRKALNIPEQL-PQWDMCNFLVNLQYRRLYRS 376 L ++ + M PP T+ S+ + P +A N PE L P +C +NL L Sbjct: 261 LTQAAGDLTMSPPTCPDTSDSSSVAGPSPNEAANNPEPLSPTMVLCQGFLNLLLWDLENE 320 Query: 377 -------MNSQYLKLLSSQKYQILLYNGDVDMACNF-----MGDEWFVDSLNQ 417 M+ L+ L SQ +Q+ + + +A +F G FVD L + Sbjct: 321 EFPETLLMDRTRLQELKSQLHQLTVMASVLLVASSFSGSVLFGSPQFVDKLKR 373 >gi|8924256 t-complex 11 isoform 2 [Homo sapiens] Length = 441 Score = 30.4 bits (67), Expect = 3.7 Identities = 30/113 (26%), Positives = 48/113 (42%), Gaps = 13/113 (11%) Query: 318 LLRSGDKVRMDPPCTNTTAASTYLNNPYVRKALNIPEQL-PQWDMCNFLVNLQYRRLYRS 376 L ++ + M PP T+ S+ + P +A N PE L P +C +NL L Sbjct: 186 LTQAAGDLTMSPPTCPDTSDSSSVAGPSPNEAANNPEPLSPTMVLCQGFLNLLLWDLENE 245 Query: 377 -------MNSQYLKLLSSQKYQILLYNGDVDMACNF-----MGDEWFVDSLNQ 417 M+ L+ L SQ +Q+ + + +A +F G FVD L + Sbjct: 246 EFPETLLMDRTRLQELKSQLHQLTVMASVLLVASSFSGSVLFGSPQFVDKLKR 298 >gi|4557239 acetylcholinesterase isoform E4-E6 precursor [Homo sapiens] Length = 614 Score = 29.6 bits (65), Expect = 6.3 Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 3/61 (4%) Query: 76 SPVVLWLNGGPGCSSLDGLLTEHGPFLVQPDG---VTLEYNPYSWNLIANVLYLESPAGV 132 +PV++W+ GG S L G FLVQ + V++ Y ++ +A E+P V Sbjct: 143 TPVLVWIYGGGFYSGASSLDVYDGRFLVQAERTVLVSMNYRVGAFGFLALPGSREAPGNV 202 Query: 133 G 133 G Sbjct: 203 G 203 >gi|7710112 acetylcholinesterase isoform E4-E5 precursor [Homo sapiens] Length = 617 Score = 29.6 bits (65), Expect = 6.3 Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 3/61 (4%) Query: 76 SPVVLWLNGGPGCSSLDGLLTEHGPFLVQPDG---VTLEYNPYSWNLIANVLYLESPAGV 132 +PV++W+ GG S L G FLVQ + V++ Y ++ +A E+P V Sbjct: 143 TPVLVWIYGGGFYSGASSLDVYDGRFLVQAERTVLVSMNYRVGAFGFLALPGSREAPGNV 202 Query: 133 G 133 G Sbjct: 203 G 203 >gi|239753385 PREDICTED: hypothetical protein XP_002345632 [Homo sapiens] Length = 80 Score = 29.3 bits (64), Expect = 8.3 Identities = 22/60 (36%), Positives = 29/60 (48%), Gaps = 2/60 (3%) Query: 65 WFVESQKDPENSPVVLWLNGGPGCSSLDGLLTEHGPFLVQPDGVTLEYNPYSWNLIANVL 124 WF S P S +V L+ GP +SL G L P L L + P SW+L+A+ L Sbjct: 22 WF--SPGMPAGSYLVNALDAGPEHNSLKGFLVPLFPLLPLIFLYFLYHLPNSWHLVADTL 79 >gi|239747954 PREDICTED: hypothetical protein XP_002346502 [Homo sapiens] Length = 80 Score = 29.3 bits (64), Expect = 8.3 Identities = 22/60 (36%), Positives = 29/60 (48%), Gaps = 2/60 (3%) Query: 65 WFVESQKDPENSPVVLWLNGGPGCSSLDGLLTEHGPFLVQPDGVTLEYNPYSWNLIANVL 124 WF S P S +V L+ GP +SL G L P L L + P SW+L+A+ L Sbjct: 22 WF--SPGMPAGSYLVNALDAGPEHNSLKGFLVPLFPLLPLIFLYFLYHLPNSWHLVADTL 79 >gi|239741849 PREDICTED: hypothetical protein XP_002342341 [Homo sapiens] Length = 80 Score = 29.3 bits (64), Expect = 8.3 Identities = 22/60 (36%), Positives = 29/60 (48%), Gaps = 2/60 (3%) Query: 65 WFVESQKDPENSPVVLWLNGGPGCSSLDGLLTEHGPFLVQPDGVTLEYNPYSWNLIANVL 124 WF S P S +V L+ GP +SL G L P L L + P SW+L+A+ L Sbjct: 22 WF--SPGMPAGSYLVNALDAGPEHNSLKGFLVPLFPLLPLIFLYFLYHLPNSWHLVADTL 79 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.321 0.137 0.429 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 19,448,797 Number of Sequences: 37866 Number of extensions: 894697 Number of successful extensions: 1982 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 5 Number of HSP's successfully gapped in prelim test: 9 Number of HSP's that attempted gapping in prelim test: 1956 Number of HSP's gapped (non-prelim): 20 length of query: 480 length of database: 18,247,518 effective HSP length: 106 effective length of query: 374 effective length of database: 14,233,722 effective search space: 5323412028 effective search space used: 5323412028 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.