Guide to the Human Genome
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Search of human proteins with 189083851

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|189083851 lipase A precursor [Homo sapiens]
         (399 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|51317399 lipase A precursor [Homo sapiens]                         840   0.0  
gi|189083851 lipase A precursor [Homo sapiens]                        840   0.0  
gi|189571695 lipase, family member M [Homo sapiens]                   501   e-142
gi|4758676 lipase, gastric precursor [Homo sapiens]                   483   e-136
gi|122937476 lipase, family member K [Homo sapiens]                   467   e-132
gi|156447044 lipase-like, ab-hydrolase domain containing 4 [Homo...   446   e-125
gi|231563300 lipase, family member J [Homo sapiens]                   419   e-117
gi|11968023 zinc finger protein 106 homolog [Homo sapiens]             29   6.6  

>gi|51317399 lipase A precursor [Homo sapiens]
          Length = 399

 Score =  840 bits (2170), Expect = 0.0
 Identities = 399/399 (100%), Positives = 399/399 (100%)

Query: 1   MKMRFLGLVVCLVLWTLHSEGSGGKLTAVDPETNMNVSEIISYWGFPSEEYLVETEDGYI 60
           MKMRFLGLVVCLVLWTLHSEGSGGKLTAVDPETNMNVSEIISYWGFPSEEYLVETEDGYI
Sbjct: 1   MKMRFLGLVVCLVLWTLHSEGSGGKLTAVDPETNMNVSEIISYWGFPSEEYLVETEDGYI 60

Query: 61  LCLNRIPHGRKNHSDKGPKPVVFLQHGLLADSSNWVTNLANSSLGFILADAGFDVWMGNS 120
           LCLNRIPHGRKNHSDKGPKPVVFLQHGLLADSSNWVTNLANSSLGFILADAGFDVWMGNS
Sbjct: 61  LCLNRIPHGRKNHSDKGPKPVVFLQHGLLADSSNWVTNLANSSLGFILADAGFDVWMGNS 120

Query: 121 RGNTWSRKHKTLSVSQDEFWAFSYDEMAKYDLPASINFILNKTGQEQVYYVGHSQGTTIG 180
           RGNTWSRKHKTLSVSQDEFWAFSYDEMAKYDLPASINFILNKTGQEQVYYVGHSQGTTIG
Sbjct: 121 RGNTWSRKHKTLSVSQDEFWAFSYDEMAKYDLPASINFILNKTGQEQVYYVGHSQGTTIG 180

Query: 181 FIAFSQIPELAKRIKMFFALGPVASVAFCTSPMAKLGRLPDHLIKDLFGDKEFLPQSAFL 240
           FIAFSQIPELAKRIKMFFALGPVASVAFCTSPMAKLGRLPDHLIKDLFGDKEFLPQSAFL
Sbjct: 181 FIAFSQIPELAKRIKMFFALGPVASVAFCTSPMAKLGRLPDHLIKDLFGDKEFLPQSAFL 240

Query: 241 KWLGTHVCTHVILKELCGNLCFLLCGFNERNLNMSRVDVYTTHSPAGTSVQNMLHWSQAV 300
           KWLGTHVCTHVILKELCGNLCFLLCGFNERNLNMSRVDVYTTHSPAGTSVQNMLHWSQAV
Sbjct: 241 KWLGTHVCTHVILKELCGNLCFLLCGFNERNLNMSRVDVYTTHSPAGTSVQNMLHWSQAV 300

Query: 301 KFQKFQAFDWGSSAKNYFHYNQSYPPTYNVKDMLVPTAVWSGGHDWLADVYDVNILLTQI 360
           KFQKFQAFDWGSSAKNYFHYNQSYPPTYNVKDMLVPTAVWSGGHDWLADVYDVNILLTQI
Sbjct: 301 KFQKFQAFDWGSSAKNYFHYNQSYPPTYNVKDMLVPTAVWSGGHDWLADVYDVNILLTQI 360

Query: 361 TNLVFHESIPEWEHLDFIWGLDAPWRLYNKIINLMRKYQ 399
           TNLVFHESIPEWEHLDFIWGLDAPWRLYNKIINLMRKYQ
Sbjct: 361 TNLVFHESIPEWEHLDFIWGLDAPWRLYNKIINLMRKYQ 399


>gi|189083851 lipase A precursor [Homo sapiens]
          Length = 399

 Score =  840 bits (2170), Expect = 0.0
 Identities = 399/399 (100%), Positives = 399/399 (100%)

Query: 1   MKMRFLGLVVCLVLWTLHSEGSGGKLTAVDPETNMNVSEIISYWGFPSEEYLVETEDGYI 60
           MKMRFLGLVVCLVLWTLHSEGSGGKLTAVDPETNMNVSEIISYWGFPSEEYLVETEDGYI
Sbjct: 1   MKMRFLGLVVCLVLWTLHSEGSGGKLTAVDPETNMNVSEIISYWGFPSEEYLVETEDGYI 60

Query: 61  LCLNRIPHGRKNHSDKGPKPVVFLQHGLLADSSNWVTNLANSSLGFILADAGFDVWMGNS 120
           LCLNRIPHGRKNHSDKGPKPVVFLQHGLLADSSNWVTNLANSSLGFILADAGFDVWMGNS
Sbjct: 61  LCLNRIPHGRKNHSDKGPKPVVFLQHGLLADSSNWVTNLANSSLGFILADAGFDVWMGNS 120

Query: 121 RGNTWSRKHKTLSVSQDEFWAFSYDEMAKYDLPASINFILNKTGQEQVYYVGHSQGTTIG 180
           RGNTWSRKHKTLSVSQDEFWAFSYDEMAKYDLPASINFILNKTGQEQVYYVGHSQGTTIG
Sbjct: 121 RGNTWSRKHKTLSVSQDEFWAFSYDEMAKYDLPASINFILNKTGQEQVYYVGHSQGTTIG 180

Query: 181 FIAFSQIPELAKRIKMFFALGPVASVAFCTSPMAKLGRLPDHLIKDLFGDKEFLPQSAFL 240
           FIAFSQIPELAKRIKMFFALGPVASVAFCTSPMAKLGRLPDHLIKDLFGDKEFLPQSAFL
Sbjct: 181 FIAFSQIPELAKRIKMFFALGPVASVAFCTSPMAKLGRLPDHLIKDLFGDKEFLPQSAFL 240

Query: 241 KWLGTHVCTHVILKELCGNLCFLLCGFNERNLNMSRVDVYTTHSPAGTSVQNMLHWSQAV 300
           KWLGTHVCTHVILKELCGNLCFLLCGFNERNLNMSRVDVYTTHSPAGTSVQNMLHWSQAV
Sbjct: 241 KWLGTHVCTHVILKELCGNLCFLLCGFNERNLNMSRVDVYTTHSPAGTSVQNMLHWSQAV 300

Query: 301 KFQKFQAFDWGSSAKNYFHYNQSYPPTYNVKDMLVPTAVWSGGHDWLADVYDVNILLTQI 360
           KFQKFQAFDWGSSAKNYFHYNQSYPPTYNVKDMLVPTAVWSGGHDWLADVYDVNILLTQI
Sbjct: 301 KFQKFQAFDWGSSAKNYFHYNQSYPPTYNVKDMLVPTAVWSGGHDWLADVYDVNILLTQI 360

Query: 361 TNLVFHESIPEWEHLDFIWGLDAPWRLYNKIINLMRKYQ 399
           TNLVFHESIPEWEHLDFIWGLDAPWRLYNKIINLMRKYQ
Sbjct: 361 TNLVFHESIPEWEHLDFIWGLDAPWRLYNKIINLMRKYQ 399


>gi|189571695 lipase, family member M [Homo sapiens]
          Length = 423

 Score =  501 bits (1289), Expect = e-142
 Identities = 235/370 (63%), Positives = 290/370 (78%)

Query: 28  AVDPETNMNVSEIISYWGFPSEEYLVETEDGYILCLNRIPHGRKNHSDKGPKPVVFLQHG 87
           AVDPE  MN+SEII + G+P EEY V TEDGYIL +NRIP G       G +PVV LQHG
Sbjct: 40  AVDPEAFMNISEIIQHQGYPCEEYEVATEDGYILSVNRIPRGLVQPKKTGSRPVVLLQHG 99

Query: 88  LLADSSNWVTNLANSSLGFILADAGFDVWMGNSRGNTWSRKHKTLSVSQDEFWAFSYDEM 147
           L+  +SNW++NL N+SLGFILADAGFDVWMGNSRGN WSRKHKTLS+ QDEFWAFSYDEM
Sbjct: 100 LVGGASNWISNLPNNSLGFILADAGFDVWMGNSRGNAWSRKHKTLSIDQDEFWAFSYDEM 159

Query: 148 AKYDLPASINFILNKTGQEQVYYVGHSQGTTIGFIAFSQIPELAKRIKMFFALGPVASVA 207
           A++DLPA INFIL KTGQE++YYVG+SQGTT+GFIAFS +PELA++IKM+FAL P+A+V 
Sbjct: 160 ARFDLPAVINFILQKTGQEKIYYVGYSQGTTMGFIAFSTMPELAQKIKMYFALAPIATVK 219

Query: 208 FCTSPMAKLGRLPDHLIKDLFGDKEFLPQSAFLKWLGTHVCTHVILKELCGNLCFLLCGF 267
              SP  K   LPD +IK LFG KEFL Q+ FL+ L  ++C  VIL ++C N+  LL GF
Sbjct: 220 HAKSPGTKFLLLPDMMIKGLFGKKEFLYQTRFLRQLVIYLCGQVILDQICSNIMLLLGGF 279

Query: 268 NERNLNMSRVDVYTTHSPAGTSVQNMLHWSQAVKFQKFQAFDWGSSAKNYFHYNQSYPPT 327
           N  N+NMSR  VY  H+ AGTSVQN+LHWSQAV   + +AFDWGS  KN    NQ  P  
Sbjct: 280 NTNNMNMSRASVYAAHTLAGTSVQNILHWSQAVNSGELRAFDWGSETKNLEKCNQPTPVR 339

Query: 328 YNVKDMLVPTAVWSGGHDWLADVYDVNILLTQITNLVFHESIPEWEHLDFIWGLDAPWRL 387
           Y V+DM VPTA+W+GG DWL++  DV +LL+++TNL++H++IPEW H+DFIWGLDAP R+
Sbjct: 340 YRVRDMTVPTAMWTGGQDWLSNPEDVKMLLSEVTNLIYHKNIPEWAHVDFIWGLDAPHRM 399

Query: 388 YNKIINLMRK 397
           YN+II+LM++
Sbjct: 400 YNEIIHLMQQ 409


>gi|4758676 lipase, gastric precursor [Homo sapiens]
          Length = 398

 Score =  483 bits (1244), Expect = e-136
 Identities = 228/383 (59%), Positives = 292/383 (76%), Gaps = 2/383 (0%)

Query: 13  VLWTLHSEGSGGKLTAVDPETNMNVSEIISYWGFPSEEYLVETEDGYILCLNRIPHGRKN 72
           VL T H  G  GKL    PE  MN+S++I+YWG+P+EEY V TEDGYIL +NRIP+G+KN
Sbjct: 13  VLGTTH--GLFGKLHPGSPEVTMNISQMITYWGYPNEEYEVVTEDGYILEVNRIPYGKKN 70

Query: 73  HSDKGPKPVVFLQHGLLADSSNWVTNLANSSLGFILADAGFDVWMGNSRGNTWSRKHKTL 132
             + G +PVVFLQHGLLA ++NW++NL N+SL FILADAG+DVW+GNSRGNTW+R++   
Sbjct: 71  SGNTGQRPVVFLQHGLLASATNWISNLPNNSLAFILADAGYDVWLGNSRGNTWARRNLYY 130

Query: 133 SVSQDEFWAFSYDEMAKYDLPASINFILNKTGQEQVYYVGHSQGTTIGFIAFSQIPELAK 192
           S    EFWAFS+DEMAKYDLPA+I+FI+ KTGQ+Q++YVGHSQGTTIGFIAFS  P LAK
Sbjct: 131 SPDSVEFWAFSFDEMAKYDLPATIDFIVKKTGQKQLHYVGHSQGTTIGFIAFSTNPSLAK 190

Query: 193 RIKMFFALGPVASVAFCTSPMAKLGRLPDHLIKDLFGDKEFLPQSAFLKWLGTHVCTHVI 252
           RIK F+AL PVA+V +  S + KL  +P  L K +FGDK F P + F ++L T VC+  +
Sbjct: 191 RIKTFYALAPVATVKYTKSLINKLRFVPQSLFKFIFGDKIFYPHNFFDQFLATEVCSREM 250

Query: 253 LKELCGNLCFLLCGFNERNLNMSRVDVYTTHSPAGTSVQNMLHWSQAVKFQKFQAFDWGS 312
           L  LC N  F++CGF+ +N N SR+DVY +H+PAGTSVQNM HW+QAVK  KFQA+DWGS
Sbjct: 251 LNLLCSNALFIICGFDSKNFNTSRLDVYLSHNPAGTSVQNMFHWTQAVKSGKFQAYDWGS 310

Query: 313 SAKNYFHYNQSYPPTYNVKDMLVPTAVWSGGHDWLADVYDVNILLTQITNLVFHESIPEW 372
             +N  HY+QS PP YNV  M VP AVW+GG D LAD  DV +LL ++ NL++H+ IP +
Sbjct: 311 PVQNRMHYDQSQPPYYNVTAMNVPIAVWNGGKDLLADPQDVGLLLPKLPNLIYHKEIPFY 370

Query: 373 EHLDFIWGLDAPWRLYNKIINLM 395
            HLDFIW +DAP  +YN I++++
Sbjct: 371 NHLDFIWAMDAPQEVYNDIVSMI 393


>gi|122937476 lipase, family member K [Homo sapiens]
          Length = 399

 Score =  467 bits (1201), Expect = e-132
 Identities = 222/388 (57%), Positives = 281/388 (72%)

Query: 11  CLVLWTLHSEGSGGKLTAVDPETNMNVSEIISYWGFPSEEYLVETEDGYILCLNRIPHGR 70
           C +L      G   K    +PE NMN+S+IISYWG+P EEY V T+DGYIL + RIPHGR
Sbjct: 9   CWMLLLGSMYGYDKKGNNANPEANMNISQIISYWGYPYEEYDVTTKDGYILGIYRIPHGR 68

Query: 71  KNHSDKGPKPVVFLQHGLLADSSNWVTNLANSSLGFILADAGFDVWMGNSRGNTWSRKHK 130
                  PKP V+LQHGL+A +SNW+ NL N+SL F+LAD+G+DVW+GNSRGNTWSRKH 
Sbjct: 69  GCPGRTAPKPAVYLQHGLIASASNWICNLPNNSLAFLLADSGYDVWLGNSRGNTWSRKHL 128

Query: 131 TLSVSQDEFWAFSYDEMAKYDLPASINFILNKTGQEQVYYVGHSQGTTIGFIAFSQIPEL 190
            LS    E+WAFS DEMAKYDLPA+INFI+ KTGQ+++YYVGHSQGTTI FIAFS  PEL
Sbjct: 129 KLSPKSPEYWAFSLDEMAKYDLPATINFIIEKTGQKRLYYVGHSQGTTIAFIAFSTNPEL 188

Query: 191 AKRIKMFFALGPVASVAFCTSPMAKLGRLPDHLIKDLFGDKEFLPQSAFLKWLGTHVCTH 250
           AK+IK+FFAL PV +V +  SPM KL  L   ++K LFGDK F P + F +++ T VC  
Sbjct: 189 AKKIKIFFALAPVVTVKYTQSPMKKLTTLSRRVVKVLFGDKMFHPHTLFDQFIATKVCNR 248

Query: 251 VILKELCGNLCFLLCGFNERNLNMSRVDVYTTHSPAGTSVQNMLHWSQAVKFQKFQAFDW 310
            + + +C N  F L GF+ +NLNMSR+DVY +H+PAGTSVQNMLHW+QAV   + QAFDW
Sbjct: 249 KLFRRICSNFLFTLSGFDPQNLNMSRLDVYLSHNPAGTSVQNMLHWAQAVNSGQLQAFDW 308

Query: 311 GSSAKNYFHYNQSYPPTYNVKDMLVPTAVWSGGHDWLADVYDVNILLTQITNLVFHESIP 370
           G+S +N  H++Q  PP YN+  M VPTA+W+GG D +AD  DV  LL QI NL++++ IP
Sbjct: 309 GNSDQNMMHFHQLTPPLYNITKMEVPTAIWNGGQDIVADPKDVENLLPQIANLIYYKLIP 368

Query: 371 EWEHLDFIWGLDAPWRLYNKIINLMRKY 398
            + H+DF  G DAP  +Y  +I LM +Y
Sbjct: 369 HYNHVDFYLGEDAPQEIYQDLIILMEEY 396


>gi|156447044 lipase-like, ab-hydrolase domain containing 4 [Homo
           sapiens]
          Length = 398

 Score =  446 bits (1148), Expect = e-125
 Identities = 213/396 (53%), Positives = 280/396 (70%)

Query: 3   MRFLGLVVCLVLWTLHSEGSGGKLTAVDPETNMNVSEIISYWGFPSEEYLVETEDGYILC 62
           M  L    CL+  TL++ G       V+PE  MN SEII Y G+PSEEY V TEDGYIL 
Sbjct: 2   MWLLLTTTCLICGTLNAGGFLDLENEVNPEVWMNTSEIIIYNGYPSEEYEVTTEDGYILL 61

Query: 63  LNRIPHGRKNHSDKGPKPVVFLQHGLLADSSNWVTNLANSSLGFILADAGFDVWMGNSRG 122
           +NRIP+GR +    GP+PVV++QH L AD++ W+ N AN SLGF+LADAG+DVWMGNSRG
Sbjct: 62  VNRIPYGRTHARSTGPRPVVYMQHALFADNAYWLENYANGSLGFLLADAGYDVWMGNSRG 121

Query: 123 NTWSRKHKTLSVSQDEFWAFSYDEMAKYDLPASINFILNKTGQEQVYYVGHSQGTTIGFI 182
           NTWSR+HKTLS + ++FWAFS+DEMAKYDLP  I+FI+NKTGQE++Y++GHS GTTIGF+
Sbjct: 122 NTWSRRHKTLSETDEKFWAFSFDEMAKYDLPGVIDFIVNKTGQEKLYFIGHSLGTTIGFV 181

Query: 183 AFSQIPELAKRIKMFFALGPVASVAFCTSPMAKLGRLPDHLIKDLFGDKEFLPQSAFLKW 242
           AFS +PELA+RIKM FALGP  S  + T    +   LP+ +IK +FG K F  +    K 
Sbjct: 182 AFSTMPELAQRIKMNFALGPTISFKYPTGIFTRFFLLPNSIIKAVFGTKGFFLEDKKTKI 241

Query: 243 LGTHVCTHVILKELCGNLCFLLCGFNERNLNMSRVDVYTTHSPAGTSVQNMLHWSQAVKF 302
             T +C + IL  +C     L  G N++N+N SR+DVY +H+P G+SV N+LH  Q    
Sbjct: 242 ASTKICNNKILWLICSEFMSLWAGSNKKNMNQSRMDVYMSHAPTGSSVHNILHIKQLYHS 301

Query: 303 QKFQAFDWGSSAKNYFHYNQSYPPTYNVKDMLVPTAVWSGGHDWLADVYDVNILLTQITN 362
            +F+A+DWG+ A N  HYNQS+PP Y++  M VPTA+W+GGHD L    DV  +L QI +
Sbjct: 302 DEFRAYDWGNDADNMKHYNQSHPPIYDLTAMKVPTAIWAGGHDVLVTPQDVARILPQIKS 361

Query: 363 LVFHESIPEWEHLDFIWGLDAPWRLYNKIINLMRKY 398
           L + + +P+W H DF+WGLDAP R+Y++II LM+ Y
Sbjct: 362 LHYFKLLPDWNHFDFVWGLDAPQRMYSEIIALMKAY 397


>gi|231563300 lipase, family member J [Homo sapiens]
          Length = 366

 Score =  419 bits (1076), Expect = e-117
 Identities = 196/363 (53%), Positives = 275/363 (75%), Gaps = 1/363 (0%)

Query: 35  MNVSEIISYWGFPSEEYLVETEDGYILCLNRIPHGRK-NHSDKGPKPVVFLQHGLLADSS 93
           MN+S+IISYWG+P EEY + TEDGYIL L RIP+ R  N+ +   + VV+LQHGLL  +S
Sbjct: 1   MNISQIISYWGYPDEEYDIVTEDGYILGLYRIPYWRTDNNKNLAQRVVVYLQHGLLTSAS 60

Query: 94  NWVTNLANSSLGFILADAGFDVWMGNSRGNTWSRKHKTLSVSQDEFWAFSYDEMAKYDLP 153
           +W++NL N+SLGFILADAG+DVWMGNSRGNTWSRKH  L  S  EFWAFS+DEMAKYDLP
Sbjct: 61  SWISNLPNNSLGFILADAGYDVWMGNSRGNTWSRKHLYLETSSKEFWAFSFDEMAKYDLP 120

Query: 154 ASINFILNKTGQEQVYYVGHSQGTTIGFIAFSQIPELAKRIKMFFALGPVASVAFCTSPM 213
           ASI+F + +T QE+++YVGHSQGTTIGFI FS I ++A+RIK+FFAL PV S  +  SP+
Sbjct: 121 ASIDFTVKQTRQEEIFYVGHSQGTTIGFITFSTISKIAERIKIFFALAPVFSTKYLKSPL 180

Query: 214 AKLGRLPDHLIKDLFGDKEFLPQSAFLKWLGTHVCTHVILKELCGNLCFLLCGFNERNLN 273
            ++      ++    G+K+FLP+++F K++G+ +C   I  ++C N+ F++ G++ +NLN
Sbjct: 181 IRMTYKWKSIVMAFSGNKDFLPKTSFKKFIGSKLCPLQIFDKICLNILFMMFGYDPKNLN 240

Query: 274 MSRVDVYTTHSPAGTSVQNMLHWSQAVKFQKFQAFDWGSSAKNYFHYNQSYPPTYNVKDM 333
           MSR+DVY +H+PAGTSVQNMLHWSQ +     +A+DWGS   N  HYNQ+  P YN+ +M
Sbjct: 241 MSRLDVYFSHNPAGTSVQNMLHWSQLLNSTHLKAYDWGSPDLNLVHYNQTTSPLYNMTNM 300

Query: 334 LVPTAVWSGGHDWLADVYDVNILLTQITNLVFHESIPEWEHLDFIWGLDAPWRLYNKIIN 393
            V TA+W+G  D LAD  DVNIL ++ITN +++++I  + H+D ++GLD   ++Y++II+
Sbjct: 301 NVATAIWNGKSDLLADPEDVNILHSEITNHIYYKTISYYNHIDSLFGLDVYDQVYHEIID 360

Query: 394 LMR 396
           +++
Sbjct: 361 IIQ 363


>gi|11968023 zinc finger protein 106 homolog [Homo sapiens]
          Length = 1883

 Score = 29.3 bits (64), Expect = 6.6
 Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 5/64 (7%)

Query: 64  NRIPHGRKNHSDKGPKPVVFLQHGLLADSSNWVTNLANSSLGFILADAGFDVW--MGNSR 121
           N  PH  +N    GP+       G+   SS W  N +NS  G+ L+++G   W   G  R
Sbjct: 145 NSFPHSLRNGG--GPRGRSGWHKGVAGGSSTWFHNHSNSGGGW-LSNSGAVDWNHNGTGR 201

Query: 122 GNTW 125
            ++W
Sbjct: 202 NSSW 205


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.322    0.137    0.446 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,020,252
Number of Sequences: 37866
Number of extensions: 690418
Number of successful extensions: 1206
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 1198
Number of HSP's gapped (non-prelim): 8
length of query: 399
length of database: 18,247,518
effective HSP length: 104
effective length of query: 295
effective length of database: 14,309,454
effective search space: 4221288930
effective search space used: 4221288930
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 63 (28.9 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
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