Guide to the Human Genome
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Name: FGF12 Sequence: fasta or formatted (243aa) NCBI GI: 11136630
Description:

fibroblast growth factor 12 isoform 1

Referenced in:

Fibroblast Growth Factors

Other entries for this name:
alt prot [181aa] fibroblast growth factor 12 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.1         10           3
 C cysteine            1.6          4           1
 D aspartate           3.3          8           1
 E glutamate           5.8         14           1
 F phenylalanine       4.1         10           1
 G glycine             8.2         20           2
 H histidine           1.6          4           1
 I isoleucine          4.1         10           1
 K lysine              7.8         19           2
 L leucine             6.2         15           1
 M methionine          2.5          6           1
 N asparagine          3.7          9           1
 P proline             4.9         12           1
 Q glutamine           4.9         12           2
 R arginine            9.1         22           3
 S serine             11.5         28           2
 T threonine           4.1         10           1
 V valine              7.8         19           2
 W tryptophan          0.4          1           1
 Y tyrosine            4.1         10           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   fibroblast growth factor 12 isoform 1 
FGF12                 0.728   fibroblast growth factor 12 isoform 2 
FGF14                 0.700   fibroblast growth factor 14 isoform 1A 
FGF13                 0.636   fibroblast growth factor 13 isoform 1 
FGF14                 0.562   fibroblast growth factor 14 isoform 1B 
FGF11                 0.532   fibroblast growth factor 11 
FGF13                 0.515   fibroblast growth factor 13 isoform 3 
FGF13                 0.515   fibroblast growth factor 13 isoform 3 
FGF13                 0.515   fibroblast growth factor 13 isoform 2 
FGF13                 0.515   fibroblast growth factor 13 isoform 4 
FGF13                 0.515   fibroblast growth factor 13 isoform 5 
FGF9                  0.203   fibroblast growth factor 9 precursor 
FGF20                 0.194   fibroblast growth factor 20 
FGF16                 0.192   fibroblast growth factor 16 
FGF10                 0.155   fibroblast growth factor 10 precursor 
FGF5                  0.149   fibroblast growth factor 5 isoform 1 precursor [Homo...
FGF7                  0.144   fibroblast growth factor 7 precursor 
FGF3                  0.144   fibroblast growth factor 3 precursor 
FGF6                  0.140   fibroblast growth factor 6 precursor 
FGF22                 0.138   fibroblast growth factor 22 precursor 
FGF4                  0.131   fibroblast growth factor 4 precursor 
FGF1                  0.119   fibroblast growth factor 1 (acidic) isoform 1 propr...
FGF1                  0.119   fibroblast growth factor 1 (acidic) isoform 1 proprot...
FGF1                  0.119   fibroblast growth factor 1 (acidic) isoform 1 propr...
FGF1                  0.119   fibroblast growth factor 1 (acidic) isoform 1 propr...
FGF2                  0.099   fibroblast growth factor 2 
FGF19                 0.054   fibroblast growth factor 19 precursor 
FGF23                 0.052   fibroblast growth factor 23 precursor 
FGF21                 0.052   fibroblast growth factor 21 precursor 
FGF18                 0.050   fibroblast growth factor 18 precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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