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Search of human proteins with 16905526
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|16905526 death-associated protein 3 [Homo sapiens]
(398 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4758118 death-associated protein 3 [Homo sapiens] 817 0.0
gi|16905526 death-associated protein 3 [Homo sapiens] 817 0.0
gi|119220575 mediator complex subunit 24 isoform 2 [Homo sapiens] 32 0.77
gi|41281496 mediator complex subunit 24 isoform 1 [Homo sapiens] 32 0.77
gi|56699473 zinc finger protein 192 [Homo sapiens] 32 1.3
gi|194272168 Mov10, Moloney leukemia virus 10, homolog [Homo sap... 31 2.2
gi|14211540 Mov10, Moloney leukemia virus 10, homolog [Homo sapi... 31 2.2
gi|72384335 zinc finger protein 311 [Homo sapiens] 29 6.5
gi|62241003 cardiomyopathy associated 5 [Homo sapiens] 29 6.5
gi|22748757 truncated type I keratin KA21 [Homo sapiens] 29 6.5
gi|19115954 dynein, axonemal, heavy chain 5 [Homo sapiens] 29 8.5
gi|87080813 LON peptidase N-terminal domain and ring finger 1 [H... 29 8.5
gi|122937396 coiled-coil domain containing 150 [Homo sapiens] 29 8.5
>gi|4758118 death-associated protein 3 [Homo sapiens]
Length = 398
Score = 817 bits (2111), Expect = 0.0
Identities = 398/398 (100%), Positives = 398/398 (100%)
Query: 1 MMLKGITRLISRIHKLDPGRFLHMGTQARQSIAAHLDNQVPVESPRAISRTNENDPAKHG 60
MMLKGITRLISRIHKLDPGRFLHMGTQARQSIAAHLDNQVPVESPRAISRTNENDPAKHG
Sbjct: 1 MMLKGITRLISRIHKLDPGRFLHMGTQARQSIAAHLDNQVPVESPRAISRTNENDPAKHG 60
Query: 61 DQHEGQHYNISPQDLETVFPHGLPPRFVMQVKTFSEACLMVRKPALELLHYLKNTSFAYP 120
DQHEGQHYNISPQDLETVFPHGLPPRFVMQVKTFSEACLMVRKPALELLHYLKNTSFAYP
Sbjct: 61 DQHEGQHYNISPQDLETVFPHGLPPRFVMQVKTFSEACLMVRKPALELLHYLKNTSFAYP 120
Query: 121 AIRYLLYGEKGTGKTLSLCHVIHFCAKQDWLILHIPDAHLWVKNCRDLLQSSYNKQRFDQ 180
AIRYLLYGEKGTGKTLSLCHVIHFCAKQDWLILHIPDAHLWVKNCRDLLQSSYNKQRFDQ
Sbjct: 121 AIRYLLYGEKGTGKTLSLCHVIHFCAKQDWLILHIPDAHLWVKNCRDLLQSSYNKQRFDQ 180
Query: 181 PLEASTWLKNFKTTNERFLNQIKVQEKYVWNKRESTEKGSPLGEVVEQGITRVRNATDAV 240
PLEASTWLKNFKTTNERFLNQIKVQEKYVWNKRESTEKGSPLGEVVEQGITRVRNATDAV
Sbjct: 181 PLEASTWLKNFKTTNERFLNQIKVQEKYVWNKRESTEKGSPLGEVVEQGITRVRNATDAV 240
Query: 241 GIVLKELKRQSSLGMFHLLVAVDGINALWGRTTLKREDKSPIAPEELALVHNLRKMMKND 300
GIVLKELKRQSSLGMFHLLVAVDGINALWGRTTLKREDKSPIAPEELALVHNLRKMMKND
Sbjct: 241 GIVLKELKRQSSLGMFHLLVAVDGINALWGRTTLKREDKSPIAPEELALVHNLRKMMKND 300
Query: 301 WHGGAIVSALSQTGSLFKPRKAYLPQELLGKEGFDALDPFIPILVSNYNPKEFESCIQYY 360
WHGGAIVSALSQTGSLFKPRKAYLPQELLGKEGFDALDPFIPILVSNYNPKEFESCIQYY
Sbjct: 301 WHGGAIVSALSQTGSLFKPRKAYLPQELLGKEGFDALDPFIPILVSNYNPKEFESCIQYY 360
Query: 361 LENNWLQHEKAPTEEGKKELLFLSNANPSLLERHCAYL 398
LENNWLQHEKAPTEEGKKELLFLSNANPSLLERHCAYL
Sbjct: 361 LENNWLQHEKAPTEEGKKELLFLSNANPSLLERHCAYL 398
>gi|16905526 death-associated protein 3 [Homo sapiens]
Length = 398
Score = 817 bits (2111), Expect = 0.0
Identities = 398/398 (100%), Positives = 398/398 (100%)
Query: 1 MMLKGITRLISRIHKLDPGRFLHMGTQARQSIAAHLDNQVPVESPRAISRTNENDPAKHG 60
MMLKGITRLISRIHKLDPGRFLHMGTQARQSIAAHLDNQVPVESPRAISRTNENDPAKHG
Sbjct: 1 MMLKGITRLISRIHKLDPGRFLHMGTQARQSIAAHLDNQVPVESPRAISRTNENDPAKHG 60
Query: 61 DQHEGQHYNISPQDLETVFPHGLPPRFVMQVKTFSEACLMVRKPALELLHYLKNTSFAYP 120
DQHEGQHYNISPQDLETVFPHGLPPRFVMQVKTFSEACLMVRKPALELLHYLKNTSFAYP
Sbjct: 61 DQHEGQHYNISPQDLETVFPHGLPPRFVMQVKTFSEACLMVRKPALELLHYLKNTSFAYP 120
Query: 121 AIRYLLYGEKGTGKTLSLCHVIHFCAKQDWLILHIPDAHLWVKNCRDLLQSSYNKQRFDQ 180
AIRYLLYGEKGTGKTLSLCHVIHFCAKQDWLILHIPDAHLWVKNCRDLLQSSYNKQRFDQ
Sbjct: 121 AIRYLLYGEKGTGKTLSLCHVIHFCAKQDWLILHIPDAHLWVKNCRDLLQSSYNKQRFDQ 180
Query: 181 PLEASTWLKNFKTTNERFLNQIKVQEKYVWNKRESTEKGSPLGEVVEQGITRVRNATDAV 240
PLEASTWLKNFKTTNERFLNQIKVQEKYVWNKRESTEKGSPLGEVVEQGITRVRNATDAV
Sbjct: 181 PLEASTWLKNFKTTNERFLNQIKVQEKYVWNKRESTEKGSPLGEVVEQGITRVRNATDAV 240
Query: 241 GIVLKELKRQSSLGMFHLLVAVDGINALWGRTTLKREDKSPIAPEELALVHNLRKMMKND 300
GIVLKELKRQSSLGMFHLLVAVDGINALWGRTTLKREDKSPIAPEELALVHNLRKMMKND
Sbjct: 241 GIVLKELKRQSSLGMFHLLVAVDGINALWGRTTLKREDKSPIAPEELALVHNLRKMMKND 300
Query: 301 WHGGAIVSALSQTGSLFKPRKAYLPQELLGKEGFDALDPFIPILVSNYNPKEFESCIQYY 360
WHGGAIVSALSQTGSLFKPRKAYLPQELLGKEGFDALDPFIPILVSNYNPKEFESCIQYY
Sbjct: 301 WHGGAIVSALSQTGSLFKPRKAYLPQELLGKEGFDALDPFIPILVSNYNPKEFESCIQYY 360
Query: 361 LENNWLQHEKAPTEEGKKELLFLSNANPSLLERHCAYL 398
LENNWLQHEKAPTEEGKKELLFLSNANPSLLERHCAYL
Sbjct: 361 LENNWLQHEKAPTEEGKKELLFLSNANPSLLERHCAYL 398
>gi|119220575 mediator complex subunit 24 isoform 2 [Homo sapiens]
Length = 976
Score = 32.3 bits (72), Expect = 0.77
Identities = 20/68 (29%), Positives = 37/68 (54%), Gaps = 8/68 (11%)
Query: 88 VMQVKTFSEACLMVRKPALELLHYLKNTSFAYPAIRYLLYGEKGTGKTLSLCHVIHFCAK 147
++Q+K + EACL + LE+L+ +N A+ +I+ + KG +L++C V
Sbjct: 556 LVQMK-WHEACLSISAAILEILNAWENGVLAFESIQKITDNIKGKVCSLAVCAVA----- 609
Query: 148 QDWLILHI 155
WL+ H+
Sbjct: 610 --WLVAHV 615
>gi|41281496 mediator complex subunit 24 isoform 1 [Homo sapiens]
Length = 989
Score = 32.3 bits (72), Expect = 0.77
Identities = 20/68 (29%), Positives = 37/68 (54%), Gaps = 8/68 (11%)
Query: 88 VMQVKTFSEACLMVRKPALELLHYLKNTSFAYPAIRYLLYGEKGTGKTLSLCHVIHFCAK 147
++Q+K + EACL + LE+L+ +N A+ +I+ + KG +L++C V
Sbjct: 569 LVQMK-WHEACLSISAAILEILNAWENGVLAFESIQKITDNIKGKVCSLAVCAVA----- 622
Query: 148 QDWLILHI 155
WL+ H+
Sbjct: 623 --WLVAHV 628
>gi|56699473 zinc finger protein 192 [Homo sapiens]
Length = 578
Score = 31.6 bits (70), Expect = 1.3
Identities = 22/86 (25%), Positives = 41/86 (47%), Gaps = 13/86 (15%)
Query: 194 TNERFLNQIKVQEKYVWNKRESTEKGSPLGEVVEQGITRVRNATDAVGIVLKELKRQSSL 253
T E L +KV+E + W++ S + +PLG Q + R+R ++L+ Q +L
Sbjct: 17 TPEEDLVIVKVEEDHGWDQESSLHESNPLG----QEVFRLR---------FRQLRYQETL 63
Query: 254 GMFHLLVAVDGINALWGRTTLKREDK 279
G L+ + + W R L +++
Sbjct: 64 GPREALIQLRALCHQWLRPDLNTKEQ 89
>gi|194272168 Mov10, Moloney leukemia virus 10, homolog [Homo
sapiens]
Length = 1003
Score = 30.8 bits (68), Expect = 2.2
Identities = 15/37 (40%), Positives = 24/37 (64%), Gaps = 6/37 (16%)
Query: 124 YLLYGEKGTGKTLSLCHVIHFCAKQDWLILHIPDAHL 160
Y+++G GTGKT++L I KQ ++ H+P AH+
Sbjct: 520 YIIFGPPGTGKTVTLVEAI----KQ--VVKHLPKAHI 550
>gi|14211540 Mov10, Moloney leukemia virus 10, homolog [Homo
sapiens]
Length = 1003
Score = 30.8 bits (68), Expect = 2.2
Identities = 15/37 (40%), Positives = 24/37 (64%), Gaps = 6/37 (16%)
Query: 124 YLLYGEKGTGKTLSLCHVIHFCAKQDWLILHIPDAHL 160
Y+++G GTGKT++L I KQ ++ H+P AH+
Sbjct: 520 YIIFGPPGTGKTVTLVEAI----KQ--VVKHLPKAHI 550
>gi|72384335 zinc finger protein 311 [Homo sapiens]
Length = 666
Score = 29.3 bits (64), Expect = 6.5
Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 13/64 (20%)
Query: 345 VSNYNPKEFESCIQ-YYLENNW-------LQHEKAPTEE-----GKKELLFLSNANPSLL 391
V + +PK E C+Q LEN W L+ EK +EE GK + + N NP+
Sbjct: 174 VDSRDPKVREVCVQDVKLENQWETSIREKLREEKEGSEEVTCKKGKNQKVLSKNLNPNSK 233
Query: 392 ERHC 395
C
Sbjct: 234 HSQC 237
>gi|62241003 cardiomyopathy associated 5 [Homo sapiens]
Length = 4069
Score = 29.3 bits (64), Expect = 6.5
Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 155 IPDAHLWVKNCRDLLQSSYNKQRFDQPLEASTWLKNFKTTNERFLNQIKVQEKYVWNKRE 214
+PD ++ +DL ++ R + PLE S K+F TT + + K++E ++ K E
Sbjct: 1836 LPDVSTSSEDKQDLGIKQFSLMRENLPLEQS---KSFMTTKPADVKETKMEEFFISPKDE 1892
Query: 215 STEKGSP 221
+ G P
Sbjct: 1893 NWMLGKP 1899
>gi|22748757 truncated type I keratin KA21 [Homo sapiens]
Length = 295
Score = 29.3 bits (64), Expect = 6.5
Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 5/40 (12%)
Query: 39 QVPVESPRAISRTNENDPAKHGDQHEGQHYNISPQDLETV 78
QV +ES A+ R EN + H + QHY + QDLETV
Sbjct: 66 QVEIESLHAVERGLEN--SLHASE---QHYQMQLQDLETV 100
>gi|19115954 dynein, axonemal, heavy chain 5 [Homo sapiens]
Length = 4624
Score = 28.9 bits (63), Expect = 8.5
Identities = 25/92 (27%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Query: 133 GKTLSLCHV-IHFCAKQDWLILHIPDAHLWVKNCRDLLQSSYNKQRFDQPLEASTWLKNF 191
GK L+L + I +W + +P+ L ++N + ++S D + W+KN
Sbjct: 3558 GKNLNLSEMLIDAPTISEWNLQGLPNDDLSIQNGIIVTKASRYPLLIDPQTQGKIWIKNK 3617
Query: 192 KTTNERFLNQIKVQEKYVWNKRE-STEKGSPL 222
++ NE L + KY N E S G PL
Sbjct: 3618 ESRNE--LQITSLNHKYFRNHLEDSLSLGRPL 3647
>gi|87080813 LON peptidase N-terminal domain and ring finger 1 [Homo
sapiens]
Length = 773
Score = 28.9 bits (63), Expect = 8.5
Identities = 26/97 (26%), Positives = 45/97 (46%), Gaps = 15/97 (15%)
Query: 181 PLEASTWLKNFKTTNERFLNQIKVQEKYVWNKRESTEKGSPLGEVVEQGITRVRNATDAV 240
PL A+ +F+T+ LN + EK+ +RE LGE++ QG R R A A
Sbjct: 181 PLAAAIAASDFRTSV--VLNHLA--EKWFPGQRERARAAGRLGELLHQG--RYREALAAA 234
Query: 241 ---------GIVLKELKRQSSLGMFHLLVAVDGINAL 268
+++K + +S G+ A++ +NA+
Sbjct: 235 CEALRAEPSDLIVKIYRAESYAGLQEFKAAIEDLNAV 271
>gi|122937396 coiled-coil domain containing 150 [Homo sapiens]
Length = 1101
Score = 28.9 bits (63), Expect = 8.5
Identities = 19/94 (20%), Positives = 40/94 (42%), Gaps = 7/94 (7%)
Query: 122 IRYLLYGEKGTGKTLSLCHVIHFCAKQDWLILHIPDAHLWVKNCRDLLQSSYNKQRFDQP 181
+R+L ++ T TL V + + + ++ +AH W K+ D LQ K R +P
Sbjct: 1000 VRHLKKCKEATENTLKEASV-----ESEQITANLEEAHRWFKHRFDGLQLELTKNRLQRP 1054
Query: 182 LEASTWLKNFKTTNERFLNQIKVQEKYVWNKRES 215
W + + ++ V + W ++++
Sbjct: 1055 SGEDRWQEKDQDVKHDVMSNQSVLHR--WERKQN 1086
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.135 0.412
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,024,110
Number of Sequences: 37866
Number of extensions: 737551
Number of successful extensions: 1722
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 1716
Number of HSP's gapped (non-prelim): 18
length of query: 398
length of database: 18,247,518
effective HSP length: 104
effective length of query: 294
effective length of database: 14,309,454
effective search space: 4206979476
effective search space used: 4206979476
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.