Search of human proteins with 160358340

Search of human proteins with 160358340

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|160358340 hypothetical protein LOC163747 isoform 2 [Homo
sapiens]
         (418 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|160358340 hypothetical protein LOC163747 isoform 2 [Homo sapi...   886   0.0  
gi|160358338 hypothetical protein LOC163747 isoform 1 [Homo sapi...   836   0.0  
gi|4507339 transcription factor T [Homo sapiens]                       31   1.8  
gi|8923958 B-cell translocation gene 4 [Homo sapiens]                  30   4.1  
gi|5453690 DnaJ (Hsp40) homolog, subfamily B, member 1 [Homo sap...    30   5.3  
gi|55743092 aristaless-like homeobox 4 [Homo sapiens]                  29   6.9  
gi|195976782 Paf1/RNA polymerase II complex component [Homo sapi...    29   6.9  
gi|11641239 hypothetical protein LOC53838 [Homo sapiens]               29   6.9  
gi|221316634 LIM domain only 7 isoform 2 [Homo sapiens]                29   9.1  
gi|149363656 SEC15-like 2 [Homo sapiens]                               29   9.1  

>gi|160358340 hypothetical protein LOC163747 isoform 2 [Homo
           sapiens]
          Length = 418

 Score =  886 bits (2289), Expect = 0.0
 Identities = 418/418 (100%), Positives = 418/418 (100%)

Query: 1   MRESQDAAGAHGWNRVGSTATKWFTGAPFGVQSHRFDISAVYPNWKKFSTFTEAPYSTRY 60
           MRESQDAAGAHGWNRVGSTATKWFTGAPFGVQSHRFDISAVYPNWKKFSTFTEAPYSTRY
Sbjct: 1   MRESQDAAGAHGWNRVGSTATKWFTGAPFGVQSHRFDISAVYPNWKKFSTFTEAPYSTRY 60

Query: 61  STQVSHIGPGTYSSKETCFSKKKLMKEVDTGWAKAQEATRLTQLPHFQYQAIMKEKRLKE 120
           STQVSHIGPGTYSSKETCFSKKKLMKEVDTGWAKAQEATRLTQLPHFQYQAIMKEKRLKE
Sbjct: 61  STQVSHIGPGTYSSKETCFSKKKLMKEVDTGWAKAQEATRLTQLPHFQYQAIMKEKRLKE 120

Query: 121 QKLGPGSYNLKDFLEQLREKPCSTRGLLSSGEVRFRGLTGNYYPGPGNYGEKGNPYTKLE 180
           QKLGPGSYNLKDFLEQLREKPCSTRGLLSSGEVRFRGLTGNYYPGPGNYGEKGNPYTKLE
Sbjct: 121 QKLGPGSYNLKDFLEQLREKPCSTRGLLSSGEVRFRGLTGNYYPGPGNYGEKGNPYTKLE 180

Query: 181 ENAWNRSHSEGLMCRMSNKPHPRPHQGSGLGPGTYFFKSDLETYVARSVGTRGPYDTFSG 240
           ENAWNRSHSEGLMCRMSNKPHPRPHQGSGLGPGTYFFKSDLETYVARSVGTRGPYDTFSG
Sbjct: 181 ENAWNRSHSEGLMCRMSNKPHPRPHQGSGLGPGTYFFKSDLETYVARSVGTRGPYDTFSG 240

Query: 241 DRSKPLPYGHYSMQKKKPRELMNFKSFVEELNSHHNKKHGVFSKLPRNPKTPTERIYWAN 300
           DRSKPLPYGHYSMQKKKPRELMNFKSFVEELNSHHNKKHGVFSKLPRNPKTPTERIYWAN
Sbjct: 241 DRSKPLPYGHYSMQKKKPRELMNFKSFVEELNSHHNKKHGVFSKLPRNPKTPTERIYWAN 300

Query: 301 LSQCPRTLATSGPSFWLPQEKKCKPVNQPPFLLTSKGSGAKACQMIMGSWNPVGVGRYLN 360
           LSQCPRTLATSGPSFWLPQEKKCKPVNQPPFLLTSKGSGAKACQMIMGSWNPVGVGRYLN
Sbjct: 301 LSQCPRTLATSGPSFWLPQEKKCKPVNQPPFLLTSKGSGAKACQMIMGSWNPVGVGRYLN 360

Query: 361 TWLMETKDRRQRYRSLFLSGSKRYLSDLARDMLMQERITPFTKGKCPPTVDYNSDPTP 418
           TWLMETKDRRQRYRSLFLSGSKRYLSDLARDMLMQERITPFTKGKCPPTVDYNSDPTP
Sbjct: 361 TWLMETKDRRQRYRSLFLSGSKRYLSDLARDMLMQERITPFTKGKCPPTVDYNSDPTP 418


>gi|160358338 hypothetical protein LOC163747 isoform 1 [Homo
           sapiens]
          Length = 414

 Score =  836 bits (2160), Expect = 0.0
 Identities = 396/398 (99%), Positives = 397/398 (99%)

Query: 1   MRESQDAAGAHGWNRVGSTATKWFTGAPFGVQSHRFDISAVYPNWKKFSTFTEAPYSTRY 60
           MRESQDAAGAHGWNRVGSTATKWFTGAPFGVQSHRFDISAVYPNWKKFSTFTEAPYSTRY
Sbjct: 1   MRESQDAAGAHGWNRVGSTATKWFTGAPFGVQSHRFDISAVYPNWKKFSTFTEAPYSTRY 60

Query: 61  STQVSHIGPGTYSSKETCFSKKKLMKEVDTGWAKAQEATRLTQLPHFQYQAIMKEKRLKE 120
           STQVSHIGPGTYSSKETCFSKKKLMKEVDTGWAKAQEATRLTQLPHFQYQAIMKEKRLKE
Sbjct: 61  STQVSHIGPGTYSSKETCFSKKKLMKEVDTGWAKAQEATRLTQLPHFQYQAIMKEKRLKE 120

Query: 121 QKLGPGSYNLKDFLEQLREKPCSTRGLLSSGEVRFRGLTGNYYPGPGNYGEKGNPYTKLE 180
           QKLGPGSYNLKDFLEQLREKPCSTRGLLSSGEVRFRGLTGNYYPGPGNYGEKGNPYTKLE
Sbjct: 121 QKLGPGSYNLKDFLEQLREKPCSTRGLLSSGEVRFRGLTGNYYPGPGNYGEKGNPYTKLE 180

Query: 181 ENAWNRSHSEGLMCRMSNKPHPRPHQGSGLGPGTYFFKSDLETYVARSVGTRGPYDTFSG 240
           ENAWNRSHSEGLMCRMSNKPHPRPHQGSGLGPGTYFFKSDLETYVARSVGTRGPYDTFSG
Sbjct: 181 ENAWNRSHSEGLMCRMSNKPHPRPHQGSGLGPGTYFFKSDLETYVARSVGTRGPYDTFSG 240

Query: 241 DRSKPLPYGHYSMQKKKPRELMNFKSFVEELNSHHNKKHGVFSKLPRNPKTPTERIYWAN 300
           DRSKPLPYGHYSMQKKKPRELMNFKSFVEELNSHHNKKHGVFSKLPRNPKTPTERIYWAN
Sbjct: 241 DRSKPLPYGHYSMQKKKPRELMNFKSFVEELNSHHNKKHGVFSKLPRNPKTPTERIYWAN 300

Query: 301 LSQCPRTLATSGPSFWLPQEKKCKPVNQPPFLLTSKGSGAKACQMIMGSWNPVGVGRYLN 360
           LSQCPRTLATSGPSFWLPQEKKCKPVNQPPFLLTSKGSGAKACQMIMGSWNPVGVGRYLN
Sbjct: 301 LSQCPRTLATSGPSFWLPQEKKCKPVNQPPFLLTSKGSGAKACQMIMGSWNPVGVGRYLN 360

Query: 361 TWLMETKDRRQRYRSLFLSGSKRYLSDLARDMLMQERI 398
           TWLMETKDRRQRYRSLFLSGSKRYLSDLARDMLMQ R+
Sbjct: 361 TWLMETKDRRQRYRSLFLSGSKRYLSDLARDMLMQIRL 398


>gi|4507339 transcription factor T [Homo sapiens]
          Length = 435

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 47/220 (21%), Positives = 70/220 (31%), Gaps = 30/220 (13%)

Query: 172 KGNPYTKLEENAWNRSHSEGLMCRMSNKPHPRPHQGSGLGPGTYFFKSDLETY------- 224
           K NP+ K   +A  RS  + +M    +   P   Q   L PGT         +       
Sbjct: 209 KYNPFAKAFLDAKERSDHKEMMEEPGDSQQPGYSQWGWLLPGTSTLCPPANPHPQFGGAL 268

Query: 225 VARSVGTRGPYDTFSGDRSKPLPYGHYSMQKKKPRELMNFKSFVEELNSHHN------KK 278
              S  +   Y T    RS P P   Y+ +   P    N  + +  L SH N        
Sbjct: 269 SLPSTHSCDRYPTLRSHRSSPYP-SPYAHRNNSPTYSDNSPACLSMLQSHDNWSSLGMPA 327

Query: 279 HGVFSKLPRNPKTPTERIYWANL-----------SQCPRTLATSGPSFWLPQEKKCKPVN 327
           H     +  N   PT    + +L           SQ        G  F+        P+ 
Sbjct: 328 HPSMLPVSHNASPPTSSSQYPSLWSVSNGAVTPGSQAAAVSNGLGAQFFRGSPAHYTPLT 387

Query: 328 QPPFLLTSKGS-----GAKACQMIMGSWNPVGVGRYLNTW 362
            P    +S GS      A A  ++   ++    GR + +W
Sbjct: 388 HPVSAPSSSGSPLYEGAAAATDIVDSQYDAAAQGRLIASW 427


>gi|8923958 B-cell translocation gene 4 [Homo sapiens]
          Length = 223

 Score = 30.0 bits (66), Expect = 4.1
 Identities = 17/96 (17%), Positives = 46/96 (47%), Gaps = 4/96 (4%)

Query: 29  FGVQSHRFDISAVYPNWKKFSTFTEAPYSTRYSTQVSHIGPGTYSSKETCFSKKKLMKEV 88
           +G ++H F +++    W+++  + +  Y+   S   S +  GT   +E+C  + +++ +V
Sbjct: 105 YGEKNHPFTVASFKGRWEEWELYQQISYAV--SRASSDVSSGTSCDEESCSKEPRVIPKV 162

Query: 89  DTGWAKAQEATRLTQLPHFQYQAIMKEKRLKEQKLG 124
                K+       + P   +  I ++K + + ++G
Sbjct: 163 SN--PKSIYQVENLKQPFQSWLQIPRKKNVVDGRVG 196


>gi|5453690 DnaJ (Hsp40) homolog, subfamily B, member 1 [Homo
           sapiens]
          Length = 340

 Score = 29.6 bits (65), Expect = 5.3
 Identities = 17/44 (38%), Positives = 20/44 (45%), Gaps = 4/44 (9%)

Query: 204 PHQGSGLGPG----TYFFKSDLETYVARSVGTRGPYDTFSGDRS 243
           P  GSG G      +Y F  D     A   G R P+DTF G R+
Sbjct: 77  PSGGSGGGANGTSFSYTFHGDPHAMFAEFFGGRNPFDTFFGQRN 120


>gi|55743092 aristaless-like homeobox 4 [Homo sapiens]
          Length = 411

 Score = 29.3 bits (64), Expect = 6.9
 Identities = 28/104 (26%), Positives = 37/104 (35%), Gaps = 6/104 (5%)

Query: 178 KLEENAWNRSHSEGLMCRMSNKPHPRPHQGSGLGPGTYFFKSDLETYVARSVGTRGPYDT 237
           KL+E +   S +  + C         P     L P +     D      +  G +GP D 
Sbjct: 138 KLQEGSSGHSAALQVPCYAKESSLGEPE----LPPDSDTVGMDSSYLSVKEAGVKGPQDR 193

Query: 238 FSGDRSKPLPYGHYSMQK-KKPRELMNFKSF-VEELNSHHNKKH 279
            S D   PL        K KK R    F S+ +EEL     K H
Sbjct: 194 ASSDLPSPLEKADSESNKGKKRRNRTTFTSYQLEELEKVFQKTH 237


>gi|195976782 Paf1/RNA polymerase II complex component [Homo
           sapiens]
          Length = 710

 Score = 29.3 bits (64), Expect = 6.9
 Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 1/71 (1%)

Query: 80  SKKKLMKEVDTGWAKAQEATRLTQLPHFQYQAIMKEKRLK-EQKLGPGSYNLKDFLEQLR 138
           +KKK  KE      + QE  +LTQ+   Q  +  KE+R K ++KL   S  +++   +  
Sbjct: 231 AKKKEKKEKKKKQEEEQEKKKLTQIQESQVTSHNKERRSKRDEKLDKKSQAMEELKAERE 290

Query: 139 EKPCSTRGLLS 149
           ++   T  LL+
Sbjct: 291 KRKNRTAELLA 301


>gi|11641239 hypothetical protein LOC53838 [Homo sapiens]
          Length = 449

 Score = 29.3 bits (64), Expect = 6.9
 Identities = 18/69 (26%), Positives = 26/69 (37%), Gaps = 7/69 (10%)

Query: 197 SNKPHPRPHQGSGLGPGTYFFKSDLETYVARSVGTRGPYDTFSG-------DRSKPLPYG 249
           + +P P P+     GPGT      +ET       + GP    SG       D  +P   G
Sbjct: 323 TTQPSPMPYTQRAAGPGTSQAPEQVETEATPGTDSTGPTPRSSGGTKMPATDSCQPSTQG 382

Query: 250 HYSMQKKKP 258
            Y +   +P
Sbjct: 383 QYMVVTTEP 391


>gi|221316634 LIM domain only 7 isoform 2 [Homo sapiens]
          Length = 1385

 Score = 28.9 bits (63), Expect = 9.1
 Identities = 24/89 (26%), Positives = 41/89 (46%), Gaps = 11/89 (12%)

Query: 234 PYDTFSGDRSKPLPYGHYSMQKKKP-RELMNFKSFVEELNSHHNKKHGVFSKLPRNPKTP 292
           P++ F  ++S+   Y    ++KKKP +   N +S+   +   + +  G FS   R     
Sbjct: 24  PFNRFLPNKSRQPSYVPAPLRKKKPDKHEDNRRSWASPV---YTEADGTFSSNQR----- 75

Query: 293 TERIYWANLSQCPRTLATSGPSFWLPQEK 321
             RI+  N+   P    TS  S +L +EK
Sbjct: 76  --RIWGTNVENWPTVQGTSKSSCYLEEEK 102


>gi|149363656 SEC15-like 2 [Homo sapiens]
          Length = 811

 Score = 28.9 bits (63), Expect = 9.1
 Identities = 15/45 (33%), Positives = 27/45 (60%), Gaps = 2/45 (4%)

Query: 97  EATRLTQLPHFQYQAIMKEK--RLKEQKLGPGSYNLKDFLEQLRE 139
           E T L Q+ H+++  +M +   +L+E+       +LKDFLE +R+
Sbjct: 167 EHTYLPQVSHYRFCKVMVDNIPKLREEIKDVSMSDLKDFLESIRK 211


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.316    0.132    0.418 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,597,422
Number of Sequences: 37866
Number of extensions: 1014707
Number of successful extensions: 2404
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 2395
Number of HSP's gapped (non-prelim): 13
length of query: 418
length of database: 18,247,518
effective HSP length: 105
effective length of query: 313
effective length of database: 14,271,588
effective search space: 4467007044
effective search space used: 4467007044
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.