Search of human proteins with 157743280

Search of human proteins with 157743280

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|157743280 parahox cluster neighbor [Homo sapiens]
         (173 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|157743280 parahox cluster neighbor [Homo sapiens]                  339   6e-94
gi|187761381 maestro isoform d [Homo sapiens]                          30   0.80 
gi|187761379 maestro isoform c [Homo sapiens]                          30   0.80 
gi|169211686 PREDICTED: hypothetical protein [Homo sapiens]            28   4.0  
gi|169211670 PREDICTED: hypothetical protein [Homo sapiens]            28   4.0  
gi|169210802 PREDICTED: hypothetical protein [Homo sapiens]            28   4.0  
gi|238859655 tetratricopeptide repeat domain 31 [Homo sapiens]         27   8.8  
gi|169214023 PREDICTED: hypothetical protein [Homo sapiens]            27   8.8  
gi|169214468 PREDICTED: hypothetical protein [Homo sapiens]            27   8.8  

>gi|157743280 parahox cluster neighbor [Homo sapiens]
          Length = 173

 Score =  339 bits (870), Expect = 6e-94
 Identities = 173/173 (100%), Positives = 173/173 (100%)

Query: 1   MDIEKVNSMDLGEFVDVFGNATERCPLIAAAVWSQRPFSDLEDLEKHFFAFIDALAQSGQ 60
           MDIEKVNSMDLGEFVDVFGNATERCPLIAAAVWSQRPFSDLEDLEKHFFAFIDALAQSGQ
Sbjct: 1   MDIEKVNSMDLGEFVDVFGNATERCPLIAAAVWSQRPFSDLEDLEKHFFAFIDALAQSGQ 60

Query: 61  EGILRCHPDLAGSELQRGTLTAESQREQSGAGLRSLGADERLRLAELNAQYRARFGFPFV 120
           EGILRCHPDLAGSELQRGTLTAESQREQSGAGLRSLGADERLRLAELNAQYRARFGFPFV
Sbjct: 61  EGILRCHPDLAGSELQRGTLTAESQREQSGAGLRSLGADERLRLAELNAQYRARFGFPFV 120

Query: 121 LAARFSDRTAVPRELARRLLCPSAQELRTALGEVKKIGSLRLADLLRADPAKL 173
           LAARFSDRTAVPRELARRLLCPSAQELRTALGEVKKIGSLRLADLLRADPAKL
Sbjct: 121 LAARFSDRTAVPRELARRLLCPSAQELRTALGEVKKIGSLRLADLLRADPAKL 173


>gi|187761381 maestro isoform d [Homo sapiens]
          Length = 262

 Score = 30.4 bits (67), Expect = 0.80
 Identities = 27/84 (32%), Positives = 36/84 (42%), Gaps = 10/84 (11%)

Query: 81  TAESQREQSGAGLRSLGADERLRLAELNAQYRARF-------GFPFVLAARFSDRTAVPR 133
           T ES   +SG G    G+    RL E    ++ RF          F+LA R  D +A  R
Sbjct: 23  TRESSPPESGTGS---GSSRGSRLQEPQVSWKLRFQKREPLKNVFFILAERARDPSAKKR 79

Query: 134 ELARRLLCPSAQELRTALGEVKKI 157
            +A R L   A E    + + KKI
Sbjct: 80  HMAMRNLGTMAYEAPDKVRKYKKI 103


>gi|187761379 maestro isoform c [Homo sapiens]
          Length = 210

 Score = 30.4 bits (67), Expect = 0.80
 Identities = 27/84 (32%), Positives = 36/84 (42%), Gaps = 10/84 (11%)

Query: 81  TAESQREQSGAGLRSLGADERLRLAELNAQYRARF-------GFPFVLAARFSDRTAVPR 133
           T ES   +SG G    G+    RL E    ++ RF          F+LA R  D +A  R
Sbjct: 23  TRESSPPESGTGS---GSSRGSRLQEPQVSWKLRFQKREPLKNVFFILAERARDPSAKKR 79

Query: 134 ELARRLLCPSAQELRTALGEVKKI 157
            +A R L   A E    + + KKI
Sbjct: 80  HMAMRNLGTMAYEAPDKVRKYKKI 103


>gi|169211686 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 252

 Score = 28.1 bits (61), Expect = 4.0
 Identities = 14/41 (34%), Positives = 21/41 (51%)

Query: 52  IDALAQSGQEGILRCHPDLAGSELQRGTLTAESQREQSGAG 92
           +D   Q  ++G LR H   AG E     ++AE+Q +  G G
Sbjct: 130 VDCHGQKAEDGALREHQHEAGEEEAAVEVSAEAQADGDGKG 170


>gi|169211670 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 252

 Score = 28.1 bits (61), Expect = 4.0
 Identities = 14/41 (34%), Positives = 21/41 (51%)

Query: 52  IDALAQSGQEGILRCHPDLAGSELQRGTLTAESQREQSGAG 92
           +D   Q  ++G LR H   AG E     ++AE+Q +  G G
Sbjct: 130 VDCHGQKAEDGALREHQHEAGEEEAAVEVSAEAQADGDGKG 170


>gi|169210802 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 252

 Score = 28.1 bits (61), Expect = 4.0
 Identities = 14/41 (34%), Positives = 21/41 (51%)

Query: 52  IDALAQSGQEGILRCHPDLAGSELQRGTLTAESQREQSGAG 92
           +D   Q  ++G LR H   AG E     ++AE+Q +  G G
Sbjct: 130 VDCHGQKAEDGALREHQHEAGEEEAAVEVSAEAQADGDGKG 170


>gi|238859655 tetratricopeptide repeat domain 31 [Homo sapiens]
          Length = 519

 Score = 26.9 bits (58), Expect = 8.8
 Identities = 23/83 (27%), Positives = 34/83 (40%), Gaps = 14/83 (16%)

Query: 25  CPL-IAAAVWSQRPFSDLEDLEKHFFAFIDALAQSGQEGILRCHPDLAGSELQ------- 76
           CPL +AAA    + F   +  E+    F+  L +S  +G+ R H D +   LQ       
Sbjct: 21  CPLEVAAAPKLCKEFGPEDYGEEDIVDFLRRLVESDPQGLHRIHVDGSSGRLQLWHHDYL 80

Query: 77  ------RGTLTAESQREQSGAGL 93
                  G  T +S R +   GL
Sbjct: 81  LGHLDDEGKSTGQSDRGKGAEGL 103


>gi|169214023 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 193

 Score = 26.9 bits (58), Expect = 8.8
 Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 6/31 (19%)

Query: 66  CHPDLAGSELQRGTLTAESQREQSGAGLRSL 96
           C P+LAG+E      +A ++RE+ G G RS+
Sbjct: 115 CWPELAGTE------SASAEREREGGGPRSI 139


>gi|169214468 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 193

 Score = 26.9 bits (58), Expect = 8.8
 Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 6/31 (19%)

Query: 66  CHPDLAGSELQRGTLTAESQREQSGAGLRSL 96
           C P+LAG+E      +A ++RE+ G G RS+
Sbjct: 115 CWPELAGTE------SASAEREREGGGPRSI 139


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.322    0.136    0.392 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,718,452
Number of Sequences: 37866
Number of extensions: 217806
Number of successful extensions: 454
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 450
Number of HSP's gapped (non-prelim): 9
length of query: 173
length of database: 18,247,518
effective HSP length: 95
effective length of query: 78
effective length of database: 14,650,248
effective search space: 1142719344
effective search space used: 1142719344
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.