Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Search of human proteins with 156447044

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|156447044 lipase-like, ab-hydrolase domain containing 4
[Homo sapiens]
         (398 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|156447044 lipase-like, ab-hydrolase domain containing 4 [Homo...   835   0.0  
gi|51317399 lipase A precursor [Homo sapiens]                         446   e-125
gi|189083851 lipase A precursor [Homo sapiens]                        446   e-125
gi|4758676 lipase, gastric precursor [Homo sapiens]                   434   e-122
gi|122937476 lipase, family member K [Homo sapiens]                   428   e-120
gi|189571695 lipase, family member M [Homo sapiens]                   423   e-118
gi|231563300 lipase, family member J [Homo sapiens]                   361   e-100
gi|224451135 splicing factor, arginine/serine-rich 15 isoform 3 ...    31   1.7  
gi|224451133 splicing factor, arginine/serine-rich 15 isoform 2 ...    31   1.7  
gi|40789229 splicing factor, arginine/serine-rich 15 isoform 1 [...    31   1.7  
gi|109689718 abhydrolase domain containing 12 isoform a [Homo sa...    30   5.0  
gi|24308097 abhydrolase domain containing 12 isoform b [Homo sap...    30   5.0  
gi|4502645 CD1B antigen precursor [Homo sapiens]                       29   6.5  
gi|11345458 hypothetical protein LOC60526 [Homo sapiens]               29   6.5  

>gi|156447044 lipase-like, ab-hydrolase domain containing 4 [Homo
           sapiens]
          Length = 398

 Score =  835 bits (2156), Expect = 0.0
 Identities = 398/398 (100%), Positives = 398/398 (100%)

Query: 1   MMWLLLTTTCLICGTLNAGGFLDLENEVNPEVWMNTSEIIIYNGYPSEEYEVTTEDGYIL 60
           MMWLLLTTTCLICGTLNAGGFLDLENEVNPEVWMNTSEIIIYNGYPSEEYEVTTEDGYIL
Sbjct: 1   MMWLLLTTTCLICGTLNAGGFLDLENEVNPEVWMNTSEIIIYNGYPSEEYEVTTEDGYIL 60

Query: 61  LVNRIPYGRTHARSTGPRPVVYMQHALFADNAYWLENYANGSLGFLLADAGYDVWMGNSR 120
           LVNRIPYGRTHARSTGPRPVVYMQHALFADNAYWLENYANGSLGFLLADAGYDVWMGNSR
Sbjct: 61  LVNRIPYGRTHARSTGPRPVVYMQHALFADNAYWLENYANGSLGFLLADAGYDVWMGNSR 120

Query: 121 GNTWSRRHKTLSETDEKFWAFSFDEMAKYDLPGVIDFIVNKTGQEKLYFIGHSLGTTIGF 180
           GNTWSRRHKTLSETDEKFWAFSFDEMAKYDLPGVIDFIVNKTGQEKLYFIGHSLGTTIGF
Sbjct: 121 GNTWSRRHKTLSETDEKFWAFSFDEMAKYDLPGVIDFIVNKTGQEKLYFIGHSLGTTIGF 180

Query: 181 VAFSTMPELAQRIKMNFALGPTISFKYPTGIFTRFFLLPNSIIKAVFGTKGFFLEDKKTK 240
           VAFSTMPELAQRIKMNFALGPTISFKYPTGIFTRFFLLPNSIIKAVFGTKGFFLEDKKTK
Sbjct: 181 VAFSTMPELAQRIKMNFALGPTISFKYPTGIFTRFFLLPNSIIKAVFGTKGFFLEDKKTK 240

Query: 241 IASTKICNNKILWLICSEFMSLWAGSNKKNMNQSRMDVYMSHAPTGSSVHNILHIKQLYH 300
           IASTKICNNKILWLICSEFMSLWAGSNKKNMNQSRMDVYMSHAPTGSSVHNILHIKQLYH
Sbjct: 241 IASTKICNNKILWLICSEFMSLWAGSNKKNMNQSRMDVYMSHAPTGSSVHNILHIKQLYH 300

Query: 301 SDEFRAYDWGNDADNMKHYNQSHPPIYDLTAMKVPTAIWAGGHDVLVTPQDVARILPQIK 360
           SDEFRAYDWGNDADNMKHYNQSHPPIYDLTAMKVPTAIWAGGHDVLVTPQDVARILPQIK
Sbjct: 301 SDEFRAYDWGNDADNMKHYNQSHPPIYDLTAMKVPTAIWAGGHDVLVTPQDVARILPQIK 360

Query: 361 SLHYFKLLPDWNHFDFVWGLDAPQRMYSEIIALMKAYS 398
           SLHYFKLLPDWNHFDFVWGLDAPQRMYSEIIALMKAYS
Sbjct: 361 SLHYFKLLPDWNHFDFVWGLDAPQRMYSEIIALMKAYS 398


>gi|51317399 lipase A precursor [Homo sapiens]
          Length = 399

 Score =  446 bits (1148), Expect = e-125
 Identities = 213/396 (53%), Positives = 280/396 (70%)

Query: 2   MWLLLTTTCLICGTLNAGGFLDLENEVNPEVWMNTSEIIIYNGYPSEEYEVTTEDGYILL 61
           M  L    CL+  TL++ G       V+PE  MN SEII Y G+PSEEY V TEDGYIL 
Sbjct: 3   MRFLGLVVCLVLWTLHSEGSGGKLTAVDPETNMNVSEIISYWGFPSEEYLVETEDGYILC 62

Query: 62  VNRIPYGRTHARSTGPRPVVYMQHALFADNAYWLENYANGSLGFLLADAGYDVWMGNSRG 121
           +NRIP+GR +    GP+PVV++QH L AD++ W+ N AN SLGF+LADAG+DVWMGNSRG
Sbjct: 63  LNRIPHGRKNHSDKGPKPVVFLQHGLLADSSNWVTNLANSSLGFILADAGFDVWMGNSRG 122

Query: 122 NTWSRRHKTLSETDEKFWAFSFDEMAKYDLPGVIDFIVNKTGQEKLYFIGHSLGTTIGFV 181
           NTWSR+HKTLS + ++FWAFS+DEMAKYDLP  I+FI+NKTGQE++Y++GHS GTTIGF+
Sbjct: 123 NTWSRKHKTLSVSQDEFWAFSYDEMAKYDLPASINFILNKTGQEQVYYVGHSQGTTIGFI 182

Query: 182 AFSTMPELAQRIKMNFALGPTISFKYPTGIFTRFFLLPNSIIKAVFGTKGFFLEDKKTKI 241
           AFS +PELA+RIKM FALGP  S  + T    +   LP+ +IK +FG K F  +    K 
Sbjct: 183 AFSQIPELAKRIKMFFALGPVASVAFCTSPMAKLGRLPDHLIKDLFGDKEFLPQSAFLKW 242

Query: 242 ASTKICNNKILWLICSEFMSLWAGSNKKNMNQSRMDVYMSHAPTGSSVHNILHIKQLYHS 301
             T +C + IL  +C     L  G N++N+N SR+DVY +H+P G+SV N+LH  Q    
Sbjct: 243 LGTHVCTHVILKELCGNLCFLLCGFNERNLNMSRVDVYTTHSPAGTSVQNMLHWSQAVKF 302

Query: 302 DEFRAYDWGNDADNMKHYNQSHPPIYDLTAMKVPTAIWAGGHDVLVTPQDVARILPQIKS 361
            +F+A+DWG+ A N  HYNQS+PP Y++  M VPTA+W+GGHD L    DV  +L QI +
Sbjct: 303 QKFQAFDWGSSAKNYFHYNQSYPPTYNVKDMLVPTAVWSGGHDWLADVYDVNILLTQITN 362

Query: 362 LHYFKLLPDWNHFDFVWGLDAPQRMYSEIIALMKAY 397
           L + + +P+W H DF+WGLDAP R+Y++II LM+ Y
Sbjct: 363 LVFHESIPEWEHLDFIWGLDAPWRLYNKIINLMRKY 398


>gi|189083851 lipase A precursor [Homo sapiens]
          Length = 399

 Score =  446 bits (1148), Expect = e-125
 Identities = 213/396 (53%), Positives = 280/396 (70%)

Query: 2   MWLLLTTTCLICGTLNAGGFLDLENEVNPEVWMNTSEIIIYNGYPSEEYEVTTEDGYILL 61
           M  L    CL+  TL++ G       V+PE  MN SEII Y G+PSEEY V TEDGYIL 
Sbjct: 3   MRFLGLVVCLVLWTLHSEGSGGKLTAVDPETNMNVSEIISYWGFPSEEYLVETEDGYILC 62

Query: 62  VNRIPYGRTHARSTGPRPVVYMQHALFADNAYWLENYANGSLGFLLADAGYDVWMGNSRG 121
           +NRIP+GR +    GP+PVV++QH L AD++ W+ N AN SLGF+LADAG+DVWMGNSRG
Sbjct: 63  LNRIPHGRKNHSDKGPKPVVFLQHGLLADSSNWVTNLANSSLGFILADAGFDVWMGNSRG 122

Query: 122 NTWSRRHKTLSETDEKFWAFSFDEMAKYDLPGVIDFIVNKTGQEKLYFIGHSLGTTIGFV 181
           NTWSR+HKTLS + ++FWAFS+DEMAKYDLP  I+FI+NKTGQE++Y++GHS GTTIGF+
Sbjct: 123 NTWSRKHKTLSVSQDEFWAFSYDEMAKYDLPASINFILNKTGQEQVYYVGHSQGTTIGFI 182

Query: 182 AFSTMPELAQRIKMNFALGPTISFKYPTGIFTRFFLLPNSIIKAVFGTKGFFLEDKKTKI 241
           AFS +PELA+RIKM FALGP  S  + T    +   LP+ +IK +FG K F  +    K 
Sbjct: 183 AFSQIPELAKRIKMFFALGPVASVAFCTSPMAKLGRLPDHLIKDLFGDKEFLPQSAFLKW 242

Query: 242 ASTKICNNKILWLICSEFMSLWAGSNKKNMNQSRMDVYMSHAPTGSSVHNILHIKQLYHS 301
             T +C + IL  +C     L  G N++N+N SR+DVY +H+P G+SV N+LH  Q    
Sbjct: 243 LGTHVCTHVILKELCGNLCFLLCGFNERNLNMSRVDVYTTHSPAGTSVQNMLHWSQAVKF 302

Query: 302 DEFRAYDWGNDADNMKHYNQSHPPIYDLTAMKVPTAIWAGGHDVLVTPQDVARILPQIKS 361
            +F+A+DWG+ A N  HYNQS+PP Y++  M VPTA+W+GGHD L    DV  +L QI +
Sbjct: 303 QKFQAFDWGSSAKNYFHYNQSYPPTYNVKDMLVPTAVWSGGHDWLADVYDVNILLTQITN 362

Query: 362 LHYFKLLPDWNHFDFVWGLDAPQRMYSEIIALMKAY 397
           L + + +P+W H DF+WGLDAP R+Y++II LM+ Y
Sbjct: 363 LVFHESIPEWEHLDFIWGLDAPWRLYNKIINLMRKY 398


>gi|4758676 lipase, gastric precursor [Homo sapiens]
          Length = 398

 Score =  434 bits (1116), Expect = e-122
 Identities = 202/393 (51%), Positives = 273/393 (69%)

Query: 2   MWLLLTTTCLICGTLNAGGFLDLENEVNPEVWMNTSEIIIYNGYPSEEYEVTTEDGYILL 61
           MWLLLT   LI       G     +  +PEV MN S++I Y GYP+EEYEV TEDGYIL 
Sbjct: 1   MWLLLTMASLISVLGTTHGLFGKLHPGSPEVTMNISQMITYWGYPNEEYEVVTEDGYILE 60

Query: 62  VNRIPYGRTHARSTGPRPVVYMQHALFADNAYWLENYANGSLGFLLADAGYDVWMGNSRG 121
           VNRIPYG+ ++ +TG RPVV++QH L A    W+ N  N SL F+LADAGYDVW+GNSRG
Sbjct: 61  VNRIPYGKKNSGNTGQRPVVFLQHGLLASATNWISNLPNNSLAFILADAGYDVWLGNSRG 120

Query: 122 NTWSRRHKTLSETDEKFWAFSFDEMAKYDLPGVIDFIVNKTGQEKLYFIGHSLGTTIGFV 181
           NTW+RR+   S    +FWAFSFDEMAKYDLP  IDFIV KTGQ++L+++GHS GTTIGF+
Sbjct: 121 NTWARRNLYYSPDSVEFWAFSFDEMAKYDLPATIDFIVKKTGQKQLHYVGHSQGTTIGFI 180

Query: 182 AFSTMPELAQRIKMNFALGPTISFKYPTGIFTRFFLLPNSIIKAVFGTKGFFLEDKKTKI 241
           AFST P LA+RIK  +AL P  + KY   +  +   +P S+ K +FG K F+  +   + 
Sbjct: 181 AFSTNPSLAKRIKTFYALAPVATVKYTKSLINKLRFVPQSLFKFIFGDKIFYPHNFFDQF 240

Query: 242 ASTKICNNKILWLICSEFMSLWAGSNKKNMNQSRMDVYMSHAPTGSSVHNILHIKQLYHS 301
            +T++C+ ++L L+CS  + +  G + KN N SR+DVY+SH P G+SV N+ H  Q   S
Sbjct: 241 LATEVCSREMLNLLCSNALFIICGFDSKNFNTSRLDVYLSHNPAGTSVQNMFHWTQAVKS 300

Query: 302 DEFRAYDWGNDADNMKHYNQSHPPIYDLTAMKVPTAIWAGGHDVLVTPQDVARILPQIKS 361
            +F+AYDWG+   N  HY+QS PP Y++TAM VP A+W GG D+L  PQDV  +LP++ +
Sbjct: 301 GKFQAYDWGSPVQNRMHYDQSQPPYYNVTAMNVPIAVWNGGKDLLADPQDVGLLLPKLPN 360

Query: 362 LHYFKLLPDWNHFDFVWGLDAPQRMYSEIIALM 394
           L Y K +P +NH DF+W +DAPQ +Y++I++++
Sbjct: 361 LIYHKEIPFYNHLDFIWAMDAPQEVYNDIVSMI 393


>gi|122937476 lipase, family member K [Homo sapiens]
          Length = 399

 Score =  428 bits (1100), Expect = e-120
 Identities = 201/396 (50%), Positives = 269/396 (67%)

Query: 2   MWLLLTTTCLICGTLNAGGFLDLENEVNPEVWMNTSEIIIYNGYPSEEYEVTTEDGYILL 61
           MW LL   C +    +  G+    N  NPE  MN S+II Y GYP EEY+VTT+DGYIL 
Sbjct: 1   MWQLLAAACWMLLLGSMYGYDKKGNNANPEANMNISQIISYWGYPYEEYDVTTKDGYILG 60

Query: 62  VNRIPYGRTHARSTGPRPVVYMQHALFADNAYWLENYANGSLGFLLADAGYDVWMGNSRG 121
           + RIP+GR     T P+P VY+QH L A  + W+ N  N SL FLLAD+GYDVW+GNSRG
Sbjct: 61  IYRIPHGRGCPGRTAPKPAVYLQHGLIASASNWICNLPNNSLAFLLADSGYDVWLGNSRG 120

Query: 122 NTWSRRHKTLSETDEKFWAFSFDEMAKYDLPGVIDFIVNKTGQEKLYFIGHSLGTTIGFV 181
           NTWSR+H  LS    ++WAFS DEMAKYDLP  I+FI+ KTGQ++LY++GHS GTTI F+
Sbjct: 121 NTWSRKHLKLSPKSPEYWAFSLDEMAKYDLPATINFIIEKTGQKRLYYVGHSQGTTIAFI 180

Query: 182 AFSTMPELAQRIKMNFALGPTISFKYPTGIFTRFFLLPNSIIKAVFGTKGFFLEDKKTKI 241
           AFST PELA++IK+ FAL P ++ KY      +   L   ++K +FG K F       + 
Sbjct: 181 AFSTNPELAKKIKIFFALAPVVTVKYTQSPMKKLTTLSRRVVKVLFGDKMFHPHTLFDQF 240

Query: 242 ASTKICNNKILWLICSEFMSLWAGSNKKNMNQSRMDVYMSHAPTGSSVHNILHIKQLYHS 301
            +TK+CN K+   ICS F+   +G + +N+N SR+DVY+SH P G+SV N+LH  Q  +S
Sbjct: 241 IATKVCNRKLFRRICSNFLFTLSGFDPQNLNMSRLDVYLSHNPAGTSVQNMLHWAQAVNS 300

Query: 302 DEFRAYDWGNDADNMKHYNQSHPPIYDLTAMKVPTAIWAGGHDVLVTPQDVARILPQIKS 361
            + +A+DWGN   NM H++Q  PP+Y++T M+VPTAIW GG D++  P+DV  +LPQI +
Sbjct: 301 GQLQAFDWGNSDQNMMHFHQLTPPLYNITKMEVPTAIWNGGQDIVADPKDVENLLPQIAN 360

Query: 362 LHYFKLLPDWNHFDFVWGLDAPQRMYSEIIALMKAY 397
           L Y+KL+P +NH DF  G DAPQ +Y ++I LM+ Y
Sbjct: 361 LIYYKLIPHYNHVDFYLGEDAPQEIYQDLIILMEEY 396


>gi|189571695 lipase, family member M [Homo sapiens]
          Length = 423

 Score =  423 bits (1087), Expect = e-118
 Identities = 207/394 (52%), Positives = 265/394 (67%), Gaps = 2/394 (0%)

Query: 2   MWLLLTTTCLICGTLNAGGFLDLENEVNPEVWMNTSEIIIYNGYPSEEYEVTTEDGYILL 61
           MWLL+    +    +N+         V+PE +MN SEII + GYP EEYEV TEDGYIL 
Sbjct: 17  MWLLILVAYMFQRNVNSVHMPT--KAVDPEAFMNISEIIQHQGYPCEEYEVATEDGYILS 74

Query: 62  VNRIPYGRTHARSTGPRPVVYMQHALFADNAYWLENYANGSLGFLLADAGYDVWMGNSRG 121
           VNRIP G    + TG RPVV +QH L    + W+ N  N SLGF+LADAG+DVWMGNSRG
Sbjct: 75  VNRIPRGLVQPKKTGSRPVVLLQHGLVGGASNWISNLPNNSLGFILADAGFDVWMGNSRG 134

Query: 122 NTWSRRHKTLSETDEKFWAFSFDEMAKYDLPGVIDFIVNKTGQEKLYFIGHSLGTTIGFV 181
           N WSR+HKTLS   ++FWAFS+DEMA++DLP VI+FI+ KTGQEK+Y++G+S GTT+GF+
Sbjct: 135 NAWSRKHKTLSIDQDEFWAFSYDEMARFDLPAVINFILQKTGQEKIYYVGYSQGTTMGFI 194

Query: 182 AFSTMPELAQRIKMNFALGPTISFKYPTGIFTRFFLLPNSIIKAVFGTKGFFLEDKKTKI 241
           AFSTMPELAQ+IKM FAL P  + K+     T+F LLP+ +IK +FG K F  + +  + 
Sbjct: 195 AFSTMPELAQKIKMYFALAPIATVKHAKSPGTKFLLLPDMMIKGLFGKKEFLYQTRFLRQ 254

Query: 242 ASTKICNNKILWLICSEFMSLWAGSNKKNMNQSRMDVYMSHAPTGSSVHNILHIKQLYHS 301
               +C   IL  ICS  M L  G N  NMN SR  VY +H   G+SV NILH  Q  +S
Sbjct: 255 LVIYLCGQVILDQICSNIMLLLGGFNTNNMNMSRASVYAAHTLAGTSVQNILHWSQAVNS 314

Query: 302 DEFRAYDWGNDADNMKHYNQSHPPIYDLTAMKVPTAIWAGGHDVLVTPQDVARILPQIKS 361
            E RA+DWG++  N++  NQ  P  Y +  M VPTA+W GG D L  P+DV  +L ++ +
Sbjct: 315 GELRAFDWGSETKNLEKCNQPTPVRYRVRDMTVPTAMWTGGQDWLSNPEDVKMLLSEVTN 374

Query: 362 LHYFKLLPDWNHFDFVWGLDAPQRMYSEIIALMK 395
           L Y K +P+W H DF+WGLDAP RMY+EII LM+
Sbjct: 375 LIYHKNIPEWAHVDFIWGLDAPHRMYNEIIHLMQ 408


>gi|231563300 lipase, family member J [Homo sapiens]
          Length = 366

 Score =  361 bits (926), Expect = e-100
 Identities = 178/363 (49%), Positives = 240/363 (66%), Gaps = 1/363 (0%)

Query: 34  MNTSEIIIYNGYPSEEYEVTTEDGYILLVNRIPYGRT-HARSTGPRPVVYMQHALFADNA 92
           MN S+II Y GYP EEY++ TEDGYIL + RIPY RT + ++   R VVY+QH L    +
Sbjct: 1   MNISQIISYWGYPDEEYDIVTEDGYILGLYRIPYWRTDNNKNLAQRVVVYLQHGLLTSAS 60

Query: 93  YWLENYANGSLGFLLADAGYDVWMGNSRGNTWSRRHKTLSETDEKFWAFSFDEMAKYDLP 152
            W+ N  N SLGF+LADAGYDVWMGNSRGNTWSR+H  L  + ++FWAFSFDEMAKYDLP
Sbjct: 61  SWISNLPNNSLGFILADAGYDVWMGNSRGNTWSRKHLYLETSSKEFWAFSFDEMAKYDLP 120

Query: 153 GVIDFIVNKTGQEKLYFIGHSLGTTIGFVAFSTMPELAQRIKMNFALGPTISFKYPTGIF 212
             IDF V +T QE+++++GHS GTTIGF+ FST+ ++A+RIK+ FAL P  S KY     
Sbjct: 121 ASIDFTVKQTRQEEIFYVGHSQGTTIGFITFSTISKIAERIKIFFALAPVFSTKYLKSPL 180

Query: 213 TRFFLLPNSIIKAVFGTKGFFLEDKKTKIASTKICNNKILWLICSEFMSLWAGSNKKNMN 272
            R      SI+ A  G K F  +    K   +K+C  +I   IC   + +  G + KN+N
Sbjct: 181 IRMTYKWKSIVMAFSGNKDFLPKTSFKKFIGSKLCPLQIFDKICLNILFMMFGYDPKNLN 240

Query: 273 QSRMDVYMSHAPTGSSVHNILHIKQLYHSDEFRAYDWGNDADNMKHYNQSHPPIYDLTAM 332
            SR+DVY SH P G+SV N+LH  QL +S   +AYDWG+   N+ HYNQ+  P+Y++T M
Sbjct: 241 MSRLDVYFSHNPAGTSVQNMLHWSQLLNSTHLKAYDWGSPDLNLVHYNQTTSPLYNMTNM 300

Query: 333 KVPTAIWAGGHDVLVTPQDVARILPQIKSLHYFKLLPDWNHFDFVWGLDAPQRMYSEIIA 392
            V TAIW G  D+L  P+DV  +  +I +  Y+K +  +NH D ++GLD   ++Y EII 
Sbjct: 301 NVATAIWNGKSDLLADPEDVNILHSEITNHIYYKTISYYNHIDSLFGLDVYDQVYHEIID 360

Query: 393 LMK 395
           +++
Sbjct: 361 IIQ 363


>gi|224451135 splicing factor, arginine/serine-rich 15 isoform 3
           [Homo sapiens]
          Length = 1125

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 17/70 (24%), Positives = 29/70 (41%)

Query: 300 HSDEFRAYDWGNDADNMKHYNQSHPPIYDLTAMKVPTAIWAGGHDVLVTPQDVARILPQI 359
           HS   R+ +  +     +   +  P +   TA    T +W G  D   T QDVA +L + 
Sbjct: 472 HSPRSRSQERRDREKERERRQKGLPQVKPETASVCSTTLWVGQLDKRTTQQDVASLLEEF 531

Query: 360 KSLHYFKLLP 369
             +    ++P
Sbjct: 532 GPIESINMIP 541


>gi|224451133 splicing factor, arginine/serine-rich 15 isoform 2
           [Homo sapiens]
          Length = 1132

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 17/70 (24%), Positives = 29/70 (41%)

Query: 300 HSDEFRAYDWGNDADNMKHYNQSHPPIYDLTAMKVPTAIWAGGHDVLVTPQDVARILPQI 359
           HS   R+ +  +     +   +  P +   TA    T +W G  D   T QDVA +L + 
Sbjct: 457 HSPRSRSQERRDREKERERRQKGLPQVKPETASVCSTTLWVGQLDKRTTQQDVASLLEEF 516

Query: 360 KSLHYFKLLP 369
             +    ++P
Sbjct: 517 GPIESINMIP 526


>gi|40789229 splicing factor, arginine/serine-rich 15 isoform 1
           [Homo sapiens]
          Length = 1147

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 17/70 (24%), Positives = 29/70 (41%)

Query: 300 HSDEFRAYDWGNDADNMKHYNQSHPPIYDLTAMKVPTAIWAGGHDVLVTPQDVARILPQI 359
           HS   R+ +  +     +   +  P +   TA    T +W G  D   T QDVA +L + 
Sbjct: 472 HSPRSRSQERRDREKERERRQKGLPQVKPETASVCSTTLWVGQLDKRTTQQDVASLLEEF 531

Query: 360 KSLHYFKLLP 369
             +    ++P
Sbjct: 532 GPIESINMIP 541


>gi|109689718 abhydrolase domain containing 12 isoform a [Homo
           sapiens]
          Length = 398

 Score = 29.6 bits (65), Expect = 5.0
 Identities = 13/30 (43%), Positives = 18/30 (60%)

Query: 149 YDLPGVIDFIVNKTGQEKLYFIGHSLGTTI 178
           YD   V D+I  ++G   +Y  GHSLGT +
Sbjct: 222 YDALHVFDWIKARSGDNPVYIWGHSLGTGV 251


>gi|24308097 abhydrolase domain containing 12 isoform b [Homo
           sapiens]
          Length = 404

 Score = 29.6 bits (65), Expect = 5.0
 Identities = 13/30 (43%), Positives = 18/30 (60%)

Query: 149 YDLPGVIDFIVNKTGQEKLYFIGHSLGTTI 178
           YD   V D+I  ++G   +Y  GHSLGT +
Sbjct: 222 YDALHVFDWIKARSGDNPVYIWGHSLGTGV 251


>gi|4502645 CD1B antigen precursor [Homo sapiens]
          Length = 333

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 3/35 (8%)

Query: 4   LLLTTTC--LICGTLNAGGFLDLENEVNPEVWMNT 36
           +LL  TC   + G LNAG   DL+ +V PE W+++
Sbjct: 178 ILLYETCPRYLLGVLNAGK-ADLQRQVKPEAWLSS 211


>gi|11345458 hypothetical protein LOC60526 [Homo sapiens]
          Length = 325

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 28/104 (26%), Positives = 46/104 (44%), Gaps = 9/104 (8%)

Query: 105 FLLADAGYDVWMGNSRGNTWSRRHKTLSETDEKFWAFSFDEMAKYDLPGVID----FIVN 160
           + L +  + VW  +  G+  + + K +  T E   A    ++  Y L G I+    F+  
Sbjct: 68  YSLTNRRFPVWTISHAGHALAPKDKKILTTSEDSNAQEIKDI--YGLNGQIEHKLAFLRT 125

Query: 161 KTGQE-KLYFIGHSLGTTIGFVAFSTMPELAQRIKMNFALGPTI 203
              ++ KL  IGHS+G+         +PEL   +   F L PTI
Sbjct: 126 HVPKDMKLVLIGHSIGSYFTLQMLKRVPELP--VIRAFLLFPTI 167


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.322    0.137    0.438 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,769,837
Number of Sequences: 37866
Number of extensions: 687836
Number of successful extensions: 1099
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 1085
Number of HSP's gapped (non-prelim): 14
length of query: 398
length of database: 18,247,518
effective HSP length: 104
effective length of query: 294
effective length of database: 14,309,454
effective search space: 4206979476
effective search space used: 4206979476
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 63 (28.9 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press