Search of human proteins with 156151411

Search of human proteins with 156151411

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|156151411 hypothetical protein LOC80185 [Homo sapiens]
         (508 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|156151411 hypothetical protein LOC80185 [Homo sapiens]            1018   0.0  
gi|156151409 hypothetical protein LOC80185 [Homo sapiens]            1018   0.0  
gi|145580615 KRI1 homolog [Homo sapiens]                               31   3.0  
gi|23397642 GREB1 protein isoform a [Homo sapiens]                     30   6.8  
gi|7661568 phosphoglucomutase 3 [Homo sapiens]                         30   6.8  
gi|223718196 perilipin [Homo sapiens]                                  29   8.8  
gi|223718203 perilipin [Homo sapiens]                                  29   8.8  
gi|109715835 HEAT repeat containing 6 [Homo sapiens]                   29   8.8  

>gi|156151411 hypothetical protein LOC80185 [Homo sapiens]
          Length = 508

 Score = 1018 bits (2631), Expect = 0.0
 Identities = 508/508 (100%), Positives = 508/508 (100%)

Query: 1   MELDSALEAPSQEDSNLSEELSHSAFGQAFSKILHCLARPEARRGNVKDAVLKDLGDLIE 60
           MELDSALEAPSQEDSNLSEELSHSAFGQAFSKILHCLARPEARRGNVKDAVLKDLGDLIE
Sbjct: 1   MELDSALEAPSQEDSNLSEELSHSAFGQAFSKILHCLARPEARRGNVKDAVLKDLGDLIE 60

Query: 61  ATEFDRLFEGTGARLRGMPETLGQVAKALEKYAAPSKEEEGGGDGHSEAAEKAAQVGLLF 120
           ATEFDRLFEGTGARLRGMPETLGQVAKALEKYAAPSKEEEGGGDGHSEAAEKAAQVGLLF
Sbjct: 61  ATEFDRLFEGTGARLRGMPETLGQVAKALEKYAAPSKEEEGGGDGHSEAAEKAAQVGLLF 120

Query: 121 LKLLGKVETAKNSLVGPAWQTGLHHLAGPVYIFAITHSLEQPWTTPRSREVAREVLTSLL 180
           LKLLGKVETAKNSLVGPAWQTGLHHLAGPVYIFAITHSLEQPWTTPRSREVAREVLTSLL
Sbjct: 121 LKLLGKVETAKNSLVGPAWQTGLHHLAGPVYIFAITHSLEQPWTTPRSREVAREVLTSLL 180

Query: 181 QVTECGSVAGFLHGENEDEKGRLSVILGLLKPDLYKESWKNNPAIKHVFSWTLQQVTRPW 240
           QVTECGSVAGFLHGENEDEKGRLSVILGLLKPDLYKESWKNNPAIKHVFSWTLQQVTRPW
Sbjct: 181 QVTECGSVAGFLHGENEDEKGRLSVILGLLKPDLYKESWKNNPAIKHVFSWTLQQVTRPW 240

Query: 241 LSQHLERVLPASLVISDDYQTENKILGVHCLHHIVLNVPAADLLQYNRAQVLYHAISNHL 300
           LSQHLERVLPASLVISDDYQTENKILGVHCLHHIVLNVPAADLLQYNRAQVLYHAISNHL
Sbjct: 241 LSQHLERVLPASLVISDDYQTENKILGVHCLHHIVLNVPAADLLQYNRAQVLYHAISNHL 300

Query: 301 YTPEHHLIQAVLLCLLDLFPILEKTLHWKGDGARPTTHCDEVLRLILTHMEPEHRLLLRR 360
           YTPEHHLIQAVLLCLLDLFPILEKTLHWKGDGARPTTHCDEVLRLILTHMEPEHRLLLRR
Sbjct: 301 YTPEHHLIQAVLLCLLDLFPILEKTLHWKGDGARPTTHCDEVLRLILTHMEPEHRLLLRR 360

Query: 361 TYARNLPAFVNRLGILTVRHLKRLERVIIGYLEVYDGPEEEARLKILETLKLLMQHTWPR 420
           TYARNLPAFVNRLGILTVRHLKRLERVIIGYLEVYDGPEEEARLKILETLKLLMQHTWPR
Sbjct: 361 TYARNLPAFVNRLGILTVRHLKRLERVIIGYLEVYDGPEEEARLKILETLKLLMQHTWPR 420

Query: 421 VSCRLVVLLKALLKLICDVARDPNLTPESVKSALLQEATDCLILLDRCSQGRVKGLLAKI 480
           VSCRLVVLLKALLKLICDVARDPNLTPESVKSALLQEATDCLILLDRCSQGRVKGLLAKI
Sbjct: 421 VSCRLVVLLKALLKLICDVARDPNLTPESVKSALLQEATDCLILLDRCSQGRVKGLLAKI 480

Query: 481 PQSCEDRKVVNYIRKVQQVSEGAPYNGT 508
           PQSCEDRKVVNYIRKVQQVSEGAPYNGT
Sbjct: 481 PQSCEDRKVVNYIRKVQQVSEGAPYNGT 508


>gi|156151409 hypothetical protein LOC80185 [Homo sapiens]
          Length = 508

 Score = 1018 bits (2631), Expect = 0.0
 Identities = 508/508 (100%), Positives = 508/508 (100%)

Query: 1   MELDSALEAPSQEDSNLSEELSHSAFGQAFSKILHCLARPEARRGNVKDAVLKDLGDLIE 60
           MELDSALEAPSQEDSNLSEELSHSAFGQAFSKILHCLARPEARRGNVKDAVLKDLGDLIE
Sbjct: 1   MELDSALEAPSQEDSNLSEELSHSAFGQAFSKILHCLARPEARRGNVKDAVLKDLGDLIE 60

Query: 61  ATEFDRLFEGTGARLRGMPETLGQVAKALEKYAAPSKEEEGGGDGHSEAAEKAAQVGLLF 120
           ATEFDRLFEGTGARLRGMPETLGQVAKALEKYAAPSKEEEGGGDGHSEAAEKAAQVGLLF
Sbjct: 61  ATEFDRLFEGTGARLRGMPETLGQVAKALEKYAAPSKEEEGGGDGHSEAAEKAAQVGLLF 120

Query: 121 LKLLGKVETAKNSLVGPAWQTGLHHLAGPVYIFAITHSLEQPWTTPRSREVAREVLTSLL 180
           LKLLGKVETAKNSLVGPAWQTGLHHLAGPVYIFAITHSLEQPWTTPRSREVAREVLTSLL
Sbjct: 121 LKLLGKVETAKNSLVGPAWQTGLHHLAGPVYIFAITHSLEQPWTTPRSREVAREVLTSLL 180

Query: 181 QVTECGSVAGFLHGENEDEKGRLSVILGLLKPDLYKESWKNNPAIKHVFSWTLQQVTRPW 240
           QVTECGSVAGFLHGENEDEKGRLSVILGLLKPDLYKESWKNNPAIKHVFSWTLQQVTRPW
Sbjct: 181 QVTECGSVAGFLHGENEDEKGRLSVILGLLKPDLYKESWKNNPAIKHVFSWTLQQVTRPW 240

Query: 241 LSQHLERVLPASLVISDDYQTENKILGVHCLHHIVLNVPAADLLQYNRAQVLYHAISNHL 300
           LSQHLERVLPASLVISDDYQTENKILGVHCLHHIVLNVPAADLLQYNRAQVLYHAISNHL
Sbjct: 241 LSQHLERVLPASLVISDDYQTENKILGVHCLHHIVLNVPAADLLQYNRAQVLYHAISNHL 300

Query: 301 YTPEHHLIQAVLLCLLDLFPILEKTLHWKGDGARPTTHCDEVLRLILTHMEPEHRLLLRR 360
           YTPEHHLIQAVLLCLLDLFPILEKTLHWKGDGARPTTHCDEVLRLILTHMEPEHRLLLRR
Sbjct: 301 YTPEHHLIQAVLLCLLDLFPILEKTLHWKGDGARPTTHCDEVLRLILTHMEPEHRLLLRR 360

Query: 361 TYARNLPAFVNRLGILTVRHLKRLERVIIGYLEVYDGPEEEARLKILETLKLLMQHTWPR 420
           TYARNLPAFVNRLGILTVRHLKRLERVIIGYLEVYDGPEEEARLKILETLKLLMQHTWPR
Sbjct: 361 TYARNLPAFVNRLGILTVRHLKRLERVIIGYLEVYDGPEEEARLKILETLKLLMQHTWPR 420

Query: 421 VSCRLVVLLKALLKLICDVARDPNLTPESVKSALLQEATDCLILLDRCSQGRVKGLLAKI 480
           VSCRLVVLLKALLKLICDVARDPNLTPESVKSALLQEATDCLILLDRCSQGRVKGLLAKI
Sbjct: 421 VSCRLVVLLKALLKLICDVARDPNLTPESVKSALLQEATDCLILLDRCSQGRVKGLLAKI 480

Query: 481 PQSCEDRKVVNYIRKVQQVSEGAPYNGT 508
           PQSCEDRKVVNYIRKVQQVSEGAPYNGT
Sbjct: 481 PQSCEDRKVVNYIRKVQQVSEGAPYNGT 508


>gi|145580615 KRI1 homolog [Homo sapiens]
          Length = 709

 Score = 30.8 bits (68), Expect = 3.0
 Identities = 21/90 (23%), Positives = 38/90 (42%), Gaps = 10/90 (11%)

Query: 84  QVAKALEKYAAPSKEEEGGGDGHSEAAEKAAQVGLLFLKLLGKVETAKNSLVGPAWQTGL 143
           Q+ ++   +   S++E+G G+G S   +K A+          + E A+       W  G 
Sbjct: 165 QLKESFRAFVEDSEDEDGAGEGGSSLLQKRAKT---------RQEKAQEEADYIEWLKGQ 215

Query: 144 HHLAGPVYIFAITHSLEQPWTTPRSREVAR 173
             +  P  +  +TH L++ W  P   E  R
Sbjct: 216 KEIRNPDSLKELTH-LKEYWNDPELDEGER 244


>gi|23397642 GREB1 protein isoform a [Homo sapiens]
          Length = 1949

 Score = 29.6 bits (65), Expect = 6.8
 Identities = 24/108 (22%), Positives = 50/108 (46%), Gaps = 14/108 (12%)

Query: 229  FSWTLQQVTRPWLSQHLER---VLPASLVISDDYQTENKILGV-------HCLHHIVLNV 278
            FSW+ + V+   + QH+E    ++  +L+    + ++ +   V       H  + I+LNV
Sbjct: 1666 FSWSERNVSLKHIMQHIEAAPDIMHYALLGLRKWSSKTRASEVQEPFSRCHVHNFIILNV 1725

Query: 279  PAADLLQYNRAQVLYHAISNHLYTPEHHLIQAVLLCLLDLFPILEKTL 326
                 +QYN+ + L   +  +L          +LLC  + F +++K +
Sbjct: 1726 DLTQNVQYNQNRFLCDDVDFNLRVHS----AGLLLCRFNRFSVMKKQI 1769


>gi|7661568 phosphoglucomutase 3 [Homo sapiens]
          Length = 542

 Score = 29.6 bits (65), Expect = 6.8
 Identities = 16/59 (27%), Positives = 31/59 (52%)

Query: 360 RTYARNLPAFVNRLGILTVRHLKRLERVIIGYLEVYDGPEEEARLKILETLKLLMQHTW 418
           RT A +L   + R+G+L V   K+ +  I   +     PEE+  +K+++ L  ++  +W
Sbjct: 29  RTKAEHLDHVMFRMGLLAVLRSKQTKSTIGVMVTASHNPEEDNGVKLVDPLGEMLAPSW 87


>gi|223718196 perilipin [Homo sapiens]
          Length = 522

 Score = 29.3 bits (64), Expect = 8.8
 Identities = 18/59 (30%), Positives = 23/59 (38%), Gaps = 6/59 (10%)

Query: 51  VLKDLGDLIEATEFDRLFEGTGARLRGMPETLGQVAKALEKYAAPSKEEEGGGDGHSEA 109
           V +D  +    T   RL  G      G    LG + K +E    P KEE     GH +A
Sbjct: 156 VARDTAEFAANTRAGRLASG------GADLALGSIEKVVEYLLPPDKEESAPAPGHQQA 208


>gi|223718203 perilipin [Homo sapiens]
          Length = 522

 Score = 29.3 bits (64), Expect = 8.8
 Identities = 18/59 (30%), Positives = 23/59 (38%), Gaps = 6/59 (10%)

Query: 51  VLKDLGDLIEATEFDRLFEGTGARLRGMPETLGQVAKALEKYAAPSKEEEGGGDGHSEA 109
           V +D  +    T   RL  G      G    LG + K +E    P KEE     GH +A
Sbjct: 156 VARDTAEFAANTRAGRLASG------GADLALGSIEKVVEYLLPPDKEESAPAPGHQQA 208


>gi|109715835 HEAT repeat containing 6 [Homo sapiens]
          Length = 1181

 Score = 29.3 bits (64), Expect = 8.8
 Identities = 16/64 (25%), Positives = 32/64 (50%), Gaps = 2/64 (3%)

Query: 255 ISDDYQTENKI--LGVHCLHHIVLNVPAADLLQYNRAQVLYHAISNHLYTPEHHLIQAVL 312
           +SD  Q++ ++    VHC+ ++ L+VP    L+     V + A    L +P+   +  + 
Sbjct: 171 LSDLAQSDPEVRRAAVHCMANLCLSVPGQPYLEEPYQNVCFQAFLTILQSPKSSDMDDIT 230

Query: 313 LCLL 316
            C+L
Sbjct: 231 FCML 234


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.136    0.405 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,190,838
Number of Sequences: 37866
Number of extensions: 915452
Number of successful extensions: 2118
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 2114
Number of HSP's gapped (non-prelim): 8
length of query: 508
length of database: 18,247,518
effective HSP length: 107
effective length of query: 401
effective length of database: 14,195,856
effective search space: 5692538256
effective search space used: 5692538256
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.