Guide to the Human Genome
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Name: C14orf159 Sequence: fasta or formatted (616aa) NCBI GI: 156139129
Description:

hypothetical protein LOC80017 isoform a

Referenced in:

Small RNAs in RNA Processing

Other entries for this name:
alt mRNA [616aa] hypothetical protein LOC80017 isoform a
alt mRNA [616aa] hypothetical protein LOC80017 isoform a
alt prot [621aa] hypothetical protein LOC80017 isoform b
alt prot [564aa] hypothetical protein LOC80017 isoform c
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.3         57           2
 C cysteine            2.8         17           2
 D aspartate           4.2         26           2
 E glutamate           6.2         38           2
 F phenylalanine       3.1         19           2
 G glycine             8.6         53           2
 H histidine           3.4         21           2
 I isoleucine          5.4         33           2
 K lysine              4.9         30           2
 L leucine            10.1         62           2
 M methionine          2.4         15           1
 N asparagine          2.1         13           1
 P proline             7.8         48           2
 Q glutamine           4.2         26           1
 R arginine            4.4         27           2
 S serine              6.8         42           2
 T threonine           4.2         26           2
 V valine              7.5         46           2
 W tryptophan          1.0          6           1
 Y tyrosine            1.8         11           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC80017 isoform a 
C14orf159             1.000   hypothetical protein LOC80017 isoform a 
C14orf159             1.000   hypothetical protein LOC80017 isoform a 
C14orf159             0.994   hypothetical protein LOC80017 isoform b 
C14orf159             0.889   hypothetical protein LOC80017 isoform c 
NOB1                  0.007   nin one binding protein 
STRC                  0.005   stereocilin 
MUC4                  0.004   mucin 4 isoform a 
TAF4B                 0.004   TAF4b RNA polymerase II, TATA box binding protein (...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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