Search of human proteins with 154937350

Search of human proteins with 154937350

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|154937350 phytanoyl-CoA dioxygenase domain containing 1
isoform a [Homo sapiens]
         (291 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|154937350 phytanoyl-CoA dioxygenase domain containing 1 isofo...   593   e-170
gi|154937352 phytanoyl-CoA dioxygenase domain containing 1 isofo...   542   e-154
gi|154937348 phytanoyl-CoA dioxygenase domain containing 1 isofo...   295   4e-80
gi|83281447 phytanoyl-CoA 2-hydroxylase isoform b precursor [Hom...    54   2e-07
gi|5453884 phytanoyl-CoA 2-hydroxylase isoform a precursor [Homo...    54   2e-07
gi|83367069 cyclin-dependent kinase-like 5 [Homo sapiens]              30   1.9  
gi|4507281 cyclin-dependent kinase-like 5 [Homo sapiens]               30   1.9  
gi|10863987 zona pellucida glycoprotein 4 preproprotein [Homo sa...    30   3.3  
gi|169173357 PREDICTED: hypothetical protein [Homo sapiens]            28   9.5  

>gi|154937350 phytanoyl-CoA dioxygenase domain containing 1 isoform
           a [Homo sapiens]
          Length = 291

 Score =  593 bits (1530), Expect = e-170
 Identities = 291/291 (100%), Positives = 291/291 (100%)

Query: 1   MACLSPSQLQKFQQDGFLVLEGFLSAEECVAMQQRIGEIVAEMDVPLHCRTEFSTQEEEQ 60
           MACLSPSQLQKFQQDGFLVLEGFLSAEECVAMQQRIGEIVAEMDVPLHCRTEFSTQEEEQ
Sbjct: 1   MACLSPSQLQKFQQDGFLVLEGFLSAEECVAMQQRIGEIVAEMDVPLHCRTEFSTQEEEQ 60

Query: 61  LRAQGSTDYFLSSGDKIRFFFEKGVFDEKGNFLVPPEKSINKIGHALHAHDPVFKSITHS 120
           LRAQGSTDYFLSSGDKIRFFFEKGVFDEKGNFLVPPEKSINKIGHALHAHDPVFKSITHS
Sbjct: 61  LRAQGSTDYFLSSGDKIRFFFEKGVFDEKGNFLVPPEKSINKIGHALHAHDPVFKSITHS 120

Query: 121 FKVQTLARSLGLQMPVVVQSMYIFKQPHFGGEVSPHQDASFLYTEPLGRVLGVWIAVEDA 180
           FKVQTLARSLGLQMPVVVQSMYIFKQPHFGGEVSPHQDASFLYTEPLGRVLGVWIAVEDA
Sbjct: 121 FKVQTLARSLGLQMPVVVQSMYIFKQPHFGGEVSPHQDASFLYTEPLGRVLGVWIAVEDA 180

Query: 181 TLENGCLWFIPGSHTSGVSRRMVRAPVGSAPGTSFLGSEPARDNSLFVPTPVQRGALVLI 240
           TLENGCLWFIPGSHTSGVSRRMVRAPVGSAPGTSFLGSEPARDNSLFVPTPVQRGALVLI
Sbjct: 181 TLENGCLWFIPGSHTSGVSRRMVRAPVGSAPGTSFLGSEPARDNSLFVPTPVQRGALVLI 240

Query: 241 HGEVVHKSKQNLSDRSRQAYTFHLMEASGTTWSPENWLQPTAELPFPQLYT 291
           HGEVVHKSKQNLSDRSRQAYTFHLMEASGTTWSPENWLQPTAELPFPQLYT
Sbjct: 241 HGEVVHKSKQNLSDRSRQAYTFHLMEASGTTWSPENWLQPTAELPFPQLYT 291


>gi|154937352 phytanoyl-CoA dioxygenase domain containing 1 isoform
           c [Homo sapiens]
          Length = 270

 Score =  542 bits (1397), Expect = e-154
 Identities = 270/291 (92%), Positives = 270/291 (92%), Gaps = 21/291 (7%)

Query: 1   MACLSPSQLQKFQQDGFLVLEGFLSAEECVAMQQRIGEIVAEMDVPLHCRTEFSTQEEEQ 60
           MACLSPSQLQKFQQDGFLVLEGFLSAEECVAMQQRIGEIVAEMDVPLHCRTEFSTQEEEQ
Sbjct: 1   MACLSPSQLQKFQQDGFLVLEGFLSAEECVAMQQRIGEIVAEMDVPLHCRTEFSTQEEEQ 60

Query: 61  LRAQGSTDYFLSSGDKIRFFFEKGVFDEKGNFLVPPEKSINKIGHALHAHDPVFKSITHS 120
           LRAQGSTDYFLSSGDKIRFFFEKGVFDEKGNFLVPPEKSINKIGHALHAHDPVFKSITHS
Sbjct: 61  LRAQGSTDYFLSSGDKIRFFFEKGVFDEKGNFLVPPEKSINKIGHALHAHDPVFKSITHS 120

Query: 121 FKVQTLARSLGLQMPVVVQSMYIFKQPHFGGEVSPHQDASFLYTEPLGRVLGVWIAVEDA 180
           FKVQ                     QPHFGGEVSPHQDASFLYTEPLGRVLGVWIAVEDA
Sbjct: 121 FKVQ---------------------QPHFGGEVSPHQDASFLYTEPLGRVLGVWIAVEDA 159

Query: 181 TLENGCLWFIPGSHTSGVSRRMVRAPVGSAPGTSFLGSEPARDNSLFVPTPVQRGALVLI 240
           TLENGCLWFIPGSHTSGVSRRMVRAPVGSAPGTSFLGSEPARDNSLFVPTPVQRGALVLI
Sbjct: 160 TLENGCLWFIPGSHTSGVSRRMVRAPVGSAPGTSFLGSEPARDNSLFVPTPVQRGALVLI 219

Query: 241 HGEVVHKSKQNLSDRSRQAYTFHLMEASGTTWSPENWLQPTAELPFPQLYT 291
           HGEVVHKSKQNLSDRSRQAYTFHLMEASGTTWSPENWLQPTAELPFPQLYT
Sbjct: 220 HGEVVHKSKQNLSDRSRQAYTFHLMEASGTTWSPENWLQPTAELPFPQLYT 270


>gi|154937348 phytanoyl-CoA dioxygenase domain containing 1 isoform
           b [Homo sapiens]
          Length = 297

 Score =  295 bits (754), Expect = 4e-80
 Identities = 146/147 (99%), Positives = 146/147 (99%)

Query: 1   MACLSPSQLQKFQQDGFLVLEGFLSAEECVAMQQRIGEIVAEMDVPLHCRTEFSTQEEEQ 60
           MACLSPSQLQKFQQDGFLVLEGFLSAEECVAMQQRIGEIVAEMDVPLHCRTEFSTQEEEQ
Sbjct: 1   MACLSPSQLQKFQQDGFLVLEGFLSAEECVAMQQRIGEIVAEMDVPLHCRTEFSTQEEEQ 60

Query: 61  LRAQGSTDYFLSSGDKIRFFFEKGVFDEKGNFLVPPEKSINKIGHALHAHDPVFKSITHS 120
           LRAQGSTDYFLSSGDKIRFFFEKGVFDEKGNFLVPPEKSINKIGHALHAHDPVFKSITHS
Sbjct: 61  LRAQGSTDYFLSSGDKIRFFFEKGVFDEKGNFLVPPEKSINKIGHALHAHDPVFKSITHS 120

Query: 121 FKVQTLARSLGLQMPVVVQSMYIFKQP 147
           FKVQTLARSLGLQMPVVVQSMYIFK P
Sbjct: 121 FKVQTLARSLGLQMPVVVQSMYIFKSP 147


>gi|83281447 phytanoyl-CoA 2-hydroxylase isoform b precursor [Homo
           sapiens]
          Length = 238

 Score = 53.5 bits (127), Expect = 2e-07
 Identities = 36/135 (26%), Positives = 58/135 (42%), Gaps = 4/135 (2%)

Query: 136 VVVQSMYIFKQPHFGGEVSPH---QDASFLYTEPLGRVLGVWIAVEDATLENGCLWFIPG 192
           + + +M I K P  G + S H   QD  +    P   ++  W A+E  +  NGCL  +PG
Sbjct: 52  MAMHTMLINKPPDSGKKTSRHPLHQDLHYFPFRPSDLIVCAWTAMEHISRNNGCLVVLPG 111

Query: 193 SHTSGVSRRMVRAPVGSAPGTSFLGSEPARDNSLFVPTPVQRGALVLIHGEVVHKSKQNL 252
           +H   +         G      F G +   +N   V   +++G  V  H  ++H S QN 
Sbjct: 112 THKGSLKPHDYPKWEGGV-NKMFHGIQDYEENKARVHLVMEKGDTVFFHPLLIHGSGQNK 170

Query: 253 SDRSRQAYTFHLMEA 267
           +   R+A + H   A
Sbjct: 171 TQGFRKAISCHFASA 185


>gi|5453884 phytanoyl-CoA 2-hydroxylase isoform a precursor [Homo
           sapiens]
          Length = 338

 Score = 53.5 bits (127), Expect = 2e-07
 Identities = 36/135 (26%), Positives = 58/135 (42%), Gaps = 4/135 (2%)

Query: 136 VVVQSMYIFKQPHFGGEVSPH---QDASFLYTEPLGRVLGVWIAVEDATLENGCLWFIPG 192
           + + +M I K P  G + S H   QD  +    P   ++  W A+E  +  NGCL  +PG
Sbjct: 152 MAMHTMLINKPPDSGKKTSRHPLHQDLHYFPFRPSDLIVCAWTAMEHISRNNGCLVVLPG 211

Query: 193 SHTSGVSRRMVRAPVGSAPGTSFLGSEPARDNSLFVPTPVQRGALVLIHGEVVHKSKQNL 252
           +H   +         G      F G +   +N   V   +++G  V  H  ++H S QN 
Sbjct: 212 THKGSLKPHDYPKWEGGV-NKMFHGIQDYEENKARVHLVMEKGDTVFFHPLLIHGSGQNK 270

Query: 253 SDRSRQAYTFHLMEA 267
           +   R+A + H   A
Sbjct: 271 TQGFRKAISCHFASA 285


>gi|83367069 cyclin-dependent kinase-like 5 [Homo sapiens]
          Length = 1030

 Score = 30.4 bits (67), Expect = 1.9
 Identities = 21/81 (25%), Positives = 36/81 (44%), Gaps = 8/81 (9%)

Query: 143 IFKQPHFGGEVSPHQDASFLYTEPLGRVLGVWIAVEDATLENGCLWFIPGSHTSGVSRRM 202
           ++  PH     +P ++   LY +P+ R +G +  V     +N         H + VS R+
Sbjct: 685 VYHDPHSDDGTAPKENRH-LYNDPVPRRVGSFYRVPSPRPDNSF-------HENNVSTRV 736

Query: 203 VRAPVGSAPGTSFLGSEPARD 223
              P  S+ GT+    +PA D
Sbjct: 737 SSLPSESSSGTNHSKRQPAFD 757


>gi|4507281 cyclin-dependent kinase-like 5 [Homo sapiens]
          Length = 1030

 Score = 30.4 bits (67), Expect = 1.9
 Identities = 21/81 (25%), Positives = 36/81 (44%), Gaps = 8/81 (9%)

Query: 143 IFKQPHFGGEVSPHQDASFLYTEPLGRVLGVWIAVEDATLENGCLWFIPGSHTSGVSRRM 202
           ++  PH     +P ++   LY +P+ R +G +  V     +N         H + VS R+
Sbjct: 685 VYHDPHSDDGTAPKENRH-LYNDPVPRRVGSFYRVPSPRPDNSF-------HENNVSTRV 736

Query: 203 VRAPVGSAPGTSFLGSEPARD 223
              P  S+ GT+    +PA D
Sbjct: 737 SSLPSESSSGTNHSKRQPAFD 757


>gi|10863987 zona pellucida glycoprotein 4 preproprotein [Homo
           sapiens]
          Length = 540

 Score = 29.6 bits (65), Expect = 3.3
 Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 4/46 (8%)

Query: 194 HTSGVSRRMVRAPVG----SAPGTSFLGSEPARDNSLFVPTPVQRG 235
           H     R++++ P+      AP T +  S PARD     P+P+ RG
Sbjct: 117 HKVVTERKLLKCPMDLLARDAPDTDWCDSIPARDRLPCAPSPISRG 162


>gi|169173357 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 200

 Score = 28.1 bits (61), Expect = 9.5
 Identities = 21/86 (24%), Positives = 30/86 (34%)

Query: 86  FDEKGNFLVPPEKSINKIGHALHAHDPVFKSITHSFKVQTLARSLGLQMPVVVQSMYIFK 145
           F  K + L+PP   + +   A H H       +H       A +   Q  V   S  +  
Sbjct: 42  FSSKAHCLLPPHPQVAEARMATHGHPQASLRSSHRPPAHCGAPARQCQQQVGTASATLLG 101

Query: 146 QPHFGGEVSPHQDASFLYTEPLGRVL 171
            P      +P   A      PLGR+L
Sbjct: 102 GPGVPWGTNPKGSAQLGTRRPLGRLL 127


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.135    0.410 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,074,035
Number of Sequences: 37866
Number of extensions: 543962
Number of successful extensions: 1025
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 1018
Number of HSP's gapped (non-prelim): 9
length of query: 291
length of database: 18,247,518
effective HSP length: 101
effective length of query: 190
effective length of database: 14,423,052
effective search space: 2740379880
effective search space used: 2740379880
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.