Search of human proteins with 153251272

Search of human proteins with 153251272

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|153251272 calcineurin-like phosphoesterase domain containing
1 isoform b [Homo sapiens]
         (172 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|153251272 calcineurin-like phosphoesterase domain containing ...   357   4e-99
gi|153251270 calcineurin-like phosphoesterase domain containing ...   207   4e-54
gi|33356547 minichromosome maintenance complex component 2 [Homo...    28   3.0  
gi|219842266 usherin isoform B [Homo sapiens]                          27   6.7  
gi|219842259 usherin isoform A [Homo sapiens]                          27   6.7  

>gi|153251272 calcineurin-like phosphoesterase domain containing 1
           isoform b [Homo sapiens]
          Length = 172

 Score =  357 bits (915), Expect = 4e-99
 Identities = 172/172 (100%), Positives = 172/172 (100%)

Query: 1   MSAAEAGGVFHRARGRTLAAFPAEKESEWKGPFYFILGADPQFGLIKAWSTGDCDNGGDE 60
           MSAAEAGGVFHRARGRTLAAFPAEKESEWKGPFYFILGADPQFGLIKAWSTGDCDNGGDE
Sbjct: 1   MSAAEAGGVFHRARGRTLAAFPAEKESEWKGPFYFILGADPQFGLIKAWSTGDCDNGGDE 60

Query: 61  WEQEIRLTEQAVQAINKLNPKPKFFVLCGDLIHAMPGVKVVFSGHYHRNAGGTYQNLDMV 120
           WEQEIRLTEQAVQAINKLNPKPKFFVLCGDLIHAMPGVKVVFSGHYHRNAGGTYQNLDMV
Sbjct: 61  WEQEIRLTEQAVQAINKLNPKPKFFVLCGDLIHAMPGVKVVFSGHYHRNAGGTYQNLDMV 120

Query: 121 VSSAIGCQLGRDPHGLRVVVVTAEKIVHRYYSLDELSEKGIEDDLMDLIKKK 172
           VSSAIGCQLGRDPHGLRVVVVTAEKIVHRYYSLDELSEKGIEDDLMDLIKKK
Sbjct: 121 VSSAIGCQLGRDPHGLRVVVVTAEKIVHRYYSLDELSEKGIEDDLMDLIKKK 172


>gi|153251270 calcineurin-like phosphoesterase domain containing 1
          isoform a [Homo sapiens]
          Length = 314

 Score =  207 bits (527), Expect = 4e-54
 Identities = 97/97 (100%), Positives = 97/97 (100%)

Query: 1  MSAAEAGGVFHRARGRTLAAFPAEKESEWKGPFYFILGADPQFGLIKAWSTGDCDNGGDE 60
          MSAAEAGGVFHRARGRTLAAFPAEKESEWKGPFYFILGADPQFGLIKAWSTGDCDNGGDE
Sbjct: 1  MSAAEAGGVFHRARGRTLAAFPAEKESEWKGPFYFILGADPQFGLIKAWSTGDCDNGGDE 60

Query: 61 WEQEIRLTEQAVQAINKLNPKPKFFVLCGDLIHAMPG 97
          WEQEIRLTEQAVQAINKLNPKPKFFVLCGDLIHAMPG
Sbjct: 61 WEQEIRLTEQAVQAINKLNPKPKFFVLCGDLIHAMPG 97



 Score =  158 bits (399), Expect = 3e-39
 Identities = 80/86 (93%), Positives = 80/86 (93%), Gaps = 2/86 (2%)

Query: 87  LCGDLIHAMPGVKVVFSGHYHRNAGGTYQNLDMVVSSAIGCQLGRDPHGLRVVVVTAEKI 146
           L    IHA  GVKVVFSGHYHRNAGGTYQNLDMVVSSAIGCQLGRDPHGLRVVVVTAEKI
Sbjct: 231 LADKFIHA--GVKVVFSGHYHRNAGGTYQNLDMVVSSAIGCQLGRDPHGLRVVVVTAEKI 288

Query: 147 VHRYYSLDELSEKGIEDDLMDLIKKK 172
           VHRYYSLDELSEKGIEDDLMDLIKKK
Sbjct: 289 VHRYYSLDELSEKGIEDDLMDLIKKK 314


>gi|33356547 minichromosome maintenance complex component 2 [Homo
           sapiens]
          Length = 904

 Score = 28.5 bits (62), Expect = 3.0
 Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 1/52 (1%)

Query: 63  QEIRLTEQAVQAINKLNPKPKFFVLCGDLIHAM-PGVKVVFSGHYHRNAGGT 113
           Q IR+ E   +      P+ K  +L  DL+ +  PG ++  +G YH N  G+
Sbjct: 374 QRIRIQESPGKVAAGRLPRSKDAILLADLVDSCKPGDEIELTGIYHNNYDGS 425


>gi|219842266 usherin isoform B [Homo sapiens]
          Length = 5202

 Score = 27.3 bits (59), Expect = 6.7
 Identities = 11/27 (40%), Positives = 16/27 (59%)

Query: 134 HGLRVVVVTAEKIVHRYYSLDELSEKG 160
           HG      TA  + HRYY++DE++  G
Sbjct: 490 HGQYYTTETAVNLRHRYYAVDEITISG 516


>gi|219842259 usherin isoform A [Homo sapiens]
          Length = 1546

 Score = 27.3 bits (59), Expect = 6.7
 Identities = 11/27 (40%), Positives = 16/27 (59%)

Query: 134 HGLRVVVVTAEKIVHRYYSLDELSEKG 160
           HG      TA  + HRYY++DE++  G
Sbjct: 490 HGQYYTTETAVNLRHRYYAVDEITISG 516


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.138    0.426 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,110,072
Number of Sequences: 37866
Number of extensions: 310897
Number of successful extensions: 542
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 537
Number of HSP's gapped (non-prelim): 6
length of query: 172
length of database: 18,247,518
effective HSP length: 95
effective length of query: 77
effective length of database: 14,650,248
effective search space: 1128069096
effective search space used: 1128069096
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.