Search of human proteins with 151101367

Search of human proteins with 151101367

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|151101367 COMM domain containing 7 isoform 2 [Homo sapiens]
         (199 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|151101367 COMM domain containing 7 isoform 2 [Homo sapiens]        394   e-110
gi|151101369 COMM domain containing 7 isoform 1 [Homo sapiens]        389   e-109
gi|21361661 COMM domain containing 4 [Homo sapiens]                    47   1e-05
gi|45333906 COMM domain containing 6 isoform b [Homo sapiens]          39   0.004
gi|45333909 COMM domain containing 6 isoform a [Homo sapiens]          33   0.16 
gi|71361682 nuclear mitotic apparatus protein 1 [Homo sapiens]         31   0.61 
gi|33342278 TraB domain containing [Homo sapiens]                      28   5.1  
gi|4885391 hyaluronan synthase 2 [Homo sapiens]                        28   6.7  
gi|239735575 otoancorin isoform 3 [Homo sapiens]                       27   8.8  
gi|24638452 otoancorin isoform 2 [Homo sapiens]                        27   8.8  
gi|77404409 otoancorin isoform 1 [Homo sapiens]                        27   8.8  

>gi|151101367 COMM domain containing 7 isoform 2 [Homo sapiens]
          Length = 199

 Score =  394 bits (1012), Expect = e-110
 Identities = 199/199 (100%), Positives = 199/199 (100%)

Query: 1   MGRLHCTEDPVPEAVGGDMQQLNQLGAQFSALTEVLFHFLTEPKEVERFLAQLSEFATTN 60
           MGRLHCTEDPVPEAVGGDMQQLNQLGAQFSALTEVLFHFLTEPKEVERFLAQLSEFATTN
Sbjct: 1   MGRLHCTEDPVPEAVGGDMQQLNQLGAQFSALTEVLFHFLTEPKEVERFLAQLSEFATTN 60

Query: 61  QISLGSLRSIVKSLLLVPNGALKKSLTAKQVQADFITLGLSEEKATYFSEKWKQNAPTLA 120
           QISLGSLRSIVKSLLLVPNGALKKSLTAKQVQADFITLGLSEEKATYFSEKWKQNAPTLA
Sbjct: 61  QISLGSLRSIVKSLLLVPNGALKKSLTAKQVQADFITLGLSEEKATYFSEKWKQNAPTLA 120

Query: 121 RWAIGQTLMINQLIDMEWKFGVTSGSSELEKVGSIFLQLKLVVKKGNQTENVYIELTLPQ 180
           RWAIGQTLMINQLIDMEWKFGVTSGSSELEKVGSIFLQLKLVVKKGNQTENVYIELTLPQ
Sbjct: 121 RWAIGQTLMINQLIDMEWKFGVTSGSSELEKVGSIFLQLKLVVKKGNQTENVYIELTLPQ 180

Query: 181 FYSFLHEMERVRTSMECFC 199
           FYSFLHEMERVRTSMECFC
Sbjct: 181 FYSFLHEMERVRTSMECFC 199


>gi|151101369 COMM domain containing 7 isoform 1 [Homo sapiens]
          Length = 200

 Score =  389 bits (1000), Expect = e-109
 Identities = 199/200 (99%), Positives = 199/200 (99%), Gaps = 1/200 (0%)

Query: 1   MGRLHCTEDPVPEAVGGDMQQLNQLGAQ-FSALTEVLFHFLTEPKEVERFLAQLSEFATT 59
           MGRLHCTEDPVPEAVGGDMQQLNQLGAQ FSALTEVLFHFLTEPKEVERFLAQLSEFATT
Sbjct: 1   MGRLHCTEDPVPEAVGGDMQQLNQLGAQQFSALTEVLFHFLTEPKEVERFLAQLSEFATT 60

Query: 60  NQISLGSLRSIVKSLLLVPNGALKKSLTAKQVQADFITLGLSEEKATYFSEKWKQNAPTL 119
           NQISLGSLRSIVKSLLLVPNGALKKSLTAKQVQADFITLGLSEEKATYFSEKWKQNAPTL
Sbjct: 61  NQISLGSLRSIVKSLLLVPNGALKKSLTAKQVQADFITLGLSEEKATYFSEKWKQNAPTL 120

Query: 120 ARWAIGQTLMINQLIDMEWKFGVTSGSSELEKVGSIFLQLKLVVKKGNQTENVYIELTLP 179
           ARWAIGQTLMINQLIDMEWKFGVTSGSSELEKVGSIFLQLKLVVKKGNQTENVYIELTLP
Sbjct: 121 ARWAIGQTLMINQLIDMEWKFGVTSGSSELEKVGSIFLQLKLVVKKGNQTENVYIELTLP 180

Query: 180 QFYSFLHEMERVRTSMECFC 199
           QFYSFLHEMERVRTSMECFC
Sbjct: 181 QFYSFLHEMERVRTSMECFC 200


>gi|21361661 COMM domain containing 4 [Homo sapiens]
          Length = 199

 Score = 46.6 bits (109), Expect = 1e-05
 Identities = 36/165 (21%), Positives = 76/165 (46%), Gaps = 6/165 (3%)

Query: 33  TEVLFHFLTEPKEVERFLAQLSEFATTNQISLGSLRSIVKSLLLVPNGALKKSLTAKQVQ 92
           ++VL   L +  + E+ L    +     +   G +++ V  L  + + A K S+  + + 
Sbjct: 35  SQVLKELLGQGIDYEKIL----KLTADAKFESGDVKATVAVLSFILSSAAKHSVDGESLS 90

Query: 93  ADFITLGLSEEKATYFSEKWKQNAPTLARWAIGQTLMINQLIDMEWKFGVTSGSSELEKV 152
           ++   LGL +E A      +++    L +     +L +N+L  + W+   T  SS L+ V
Sbjct: 91  SELQQLGLPKEHAASLCRCYEEKQSPLQKHLRVCSLRMNRLAGVGWRVDYTLSSSLLQSV 150

Query: 153 GS--IFLQLKLVVKKGNQTENVYIELTLPQFYSFLHEMERVRTSM 195
               + L+L++    G   + V + L+  +F   L E+++ +T M
Sbjct: 151 EEPMVHLRLEVAAAPGTPAQPVAMSLSADKFQVLLAELKQAQTLM 195


>gi|45333906 COMM domain containing 6 isoform b [Homo sapiens]
          Length = 85

 Score = 38.5 bits (88), Expect = 0.004
 Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 1/67 (1%)

Query: 131 NQLIDMEWKFGVTSGSSELEKVGSIFLQLKL-VVKKGNQTENVYIELTLPQFYSFLHEME 189
           NQL+D +WK G+   S     +   ++ + L V     Q +    E+T+PQF +F  + +
Sbjct: 17  NQLVDFQWKLGMAVSSDTCRSLKYPYVAVMLKVADHSGQVKTKCFEMTIPQFQNFYRQFK 76

Query: 190 RVRTSME 196
            +   +E
Sbjct: 77  EIAAVIE 83


>gi|45333909 COMM domain containing 6 isoform a [Homo sapiens]
          Length = 98

 Score = 33.1 bits (74), Expect = 0.16
 Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 1/52 (1%)

Query: 131 NQLIDMEWKFGVTSGSSELEKVGSIFLQLKL-VVKKGNQTENVYIELTLPQF 181
           NQL+D +WK G+   S     +   ++ + L V     Q +    E+T+PQF
Sbjct: 17  NQLVDFQWKLGMAVSSDTCRSLKYPYVAVMLKVADHSGQVKTKCFEMTIPQF 68


>gi|71361682 nuclear mitotic apparatus protein 1 [Homo sapiens]
          Length = 2115

 Score = 31.2 bits (69), Expect = 0.61
 Identities = 19/53 (35%), Positives = 26/53 (49%)

Query: 22   LNQLGAQFSALTEVLFHFLTEPKEVERFLAQLSEFATTNQISLGSLRSIVKSL 74
            LN+   +F+ L E L H LTE +  ++ LA+L          L  LR  VK L
Sbjct: 1038 LNEQRVEFATLQEALAHALTEKEGKDQELAKLRGLEAAQIKELEELRQTVKQL 1090


>gi|33342278 TraB domain containing [Homo sapiens]
          Length = 376

 Score = 28.1 bits (61), Expect = 5.1
 Identities = 36/148 (24%), Positives = 60/148 (40%), Gaps = 28/148 (18%)

Query: 9   DPVPEAVGGDMQQLNQLGAQFSALTEVLFHFLTEPKEVERFLAQLSE-------FATTNQ 61
           +PVP  + GD Q L+ + A F+ L E+      +   + R + QL            T  
Sbjct: 24  EPVPRVLSGDPQNLSDVDA-FNLLLEMKLKRRRQRPNLPRTVTQLVAEDGSRVYVVGTAH 82

Query: 62  ISLGSLRSIVKSLLLVPNGALKKSLTAKQVQADFITLGLSEEKATYFSEKWKQNAPTLAR 121
            S  S R +VK              T ++VQ D + + L + + +      K +  TL R
Sbjct: 83  FSDDSKRDVVK--------------TIREVQPDVVVVELCQYRVSML----KMDESTLLR 124

Query: 122 WAIGQTLMINQLIDMEWKFGVTSGSSEL 149
            A  Q L + +L     + G+ SG  ++
Sbjct: 125 EA--QELSLEKLQQAVRQNGLMSGLMQM 150


>gi|4885391 hyaluronan synthase 2 [Homo sapiens]
          Length = 552

 Score = 27.7 bits (60), Expect = 6.7
 Identities = 13/30 (43%), Positives = 19/30 (63%)

Query: 8   EDPVPEAVGGDMQQLNQLGAQFSALTEVLF 37
           EDP+   VGGD+Q LN+  +  S L+ V +
Sbjct: 231 EDPMVGGVGGDVQILNKYDSWISFLSSVRY 260


>gi|239735575 otoancorin isoform 3 [Homo sapiens]
          Length = 1060

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 30/113 (26%), Positives = 51/113 (45%), Gaps = 16/113 (14%)

Query: 12  PEAVGGDMQQLNQ-----------LGAQFSALTEVLFHFLTEPKEVERFLAQLSE--FAT 58
           PEAV G +  LNQ           L A++ A  +VL  +     ++   LA +S   F +
Sbjct: 328 PEAVHGAISTLNQVSGWAKSQVIILSAKYLAHEKVLSFY--NVSQMGALLAGVSTQAFCS 385

Query: 59  TNQISLGS-LRSIVKSLLLVPNGALKKSLTAKQVQADFITLGLSEEKATYFSE 110
             +  +   LRS V   +   + A ++ + +K VQA+    G+ E +  +F E
Sbjct: 386 MKRKDISQVLRSAVSQYVSDLSPAQQQGILSKMVQAEDTAPGIVEIQGAFFKE 438


>gi|24638452 otoancorin isoform 2 [Homo sapiens]
          Length = 815

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 30/113 (26%), Positives = 51/113 (45%), Gaps = 16/113 (14%)

Query: 12  PEAVGGDMQQLNQ-----------LGAQFSALTEVLFHFLTEPKEVERFLAQLSE--FAT 58
           PEAV G +  LNQ           L A++ A  +VL  +     ++   LA +S   F +
Sbjct: 83  PEAVHGAISTLNQVSGWAKSQVIILSAKYLAHEKVLSFY--NVSQMGALLAGVSTQAFCS 140

Query: 59  TNQISLGS-LRSIVKSLLLVPNGALKKSLTAKQVQADFITLGLSEEKATYFSE 110
             +  +   LRS V   +   + A ++ + +K VQA+    G+ E +  +F E
Sbjct: 141 MKRKDISQVLRSAVSQYVSDLSPAQQQGILSKMVQAEDTAPGIVEIQGAFFKE 193


>gi|77404409 otoancorin isoform 1 [Homo sapiens]
          Length = 1139

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 30/113 (26%), Positives = 51/113 (45%), Gaps = 16/113 (14%)

Query: 12  PEAVGGDMQQLNQ-----------LGAQFSALTEVLFHFLTEPKEVERFLAQLSE--FAT 58
           PEAV G +  LNQ           L A++ A  +VL  +     ++   LA +S   F +
Sbjct: 407 PEAVHGAISTLNQVSGWAKSQVIILSAKYLAHEKVLSFY--NVSQMGALLAGVSTQAFCS 464

Query: 59  TNQISLGS-LRSIVKSLLLVPNGALKKSLTAKQVQADFITLGLSEEKATYFSE 110
             +  +   LRS V   +   + A ++ + +K VQA+    G+ E +  +F E
Sbjct: 465 MKRKDISQVLRSAVSQYVSDLSPAQQQGILSKMVQAEDTAPGIVEIQGAFFKE 517


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.133    0.380 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,521,157
Number of Sequences: 37866
Number of extensions: 236308
Number of successful extensions: 581
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 574
Number of HSP's gapped (non-prelim): 11
length of query: 199
length of database: 18,247,518
effective HSP length: 97
effective length of query: 102
effective length of database: 14,574,516
effective search space: 1486600632
effective search space used: 1486600632
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.