Search of human proteins with 148806894

Search of human proteins with 148806894

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|148806894 hypothetical protein LOC26175 isoform 1 [Homo
sapiens]
         (169 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|148806894 hypothetical protein LOC26175 isoform 1 [Homo sapiens]   352   1e-97
gi|148806869 hypothetical protein LOC26175 isoform 2 [Homo sapiens]   274   3e-74
gi|4502641 chemokine (C-C motif) receptor 7 precursor [Homo sapi...    28   4.9  
gi|218084958 anoctamin 4 [Homo sapiens]                                27   6.4  
gi|38788372 aquarius [Homo sapiens]                                    27   6.4  
gi|90855771 hypothetical protein LOC55744 [Homo sapiens]               27   8.4  

>gi|148806894 hypothetical protein LOC26175 isoform 1 [Homo sapiens]
          Length = 169

 Score =  352 bits (902), Expect = 1e-97
 Identities = 169/169 (100%), Positives = 169/169 (100%)

Query: 1   MLAFSEMPKPPDYSELSDSLTLAVGTGRFSGPLHRAWRMMNFRQRMGWIGVGLYLLASAA 60
           MLAFSEMPKPPDYSELSDSLTLAVGTGRFSGPLHRAWRMMNFRQRMGWIGVGLYLLASAA
Sbjct: 1   MLAFSEMPKPPDYSELSDSLTLAVGTGRFSGPLHRAWRMMNFRQRMGWIGVGLYLLASAA 60

Query: 61  AFYYVFEISETYNRLALEHIQQHPEEPLEGTTWTHSLKAQLLSLPFWVWTVIFLVPYLQM 120
           AFYYVFEISETYNRLALEHIQQHPEEPLEGTTWTHSLKAQLLSLPFWVWTVIFLVPYLQM
Sbjct: 61  AFYYVFEISETYNRLALEHIQQHPEEPLEGTTWTHSLKAQLLSLPFWVWTVIFLVPYLQM 120

Query: 121 FLFLYSCTRADPKTVGYCIIPICLAVICNRHQAFVKASNQISRLQLIDT 169
           FLFLYSCTRADPKTVGYCIIPICLAVICNRHQAFVKASNQISRLQLIDT
Sbjct: 121 FLFLYSCTRADPKTVGYCIIPICLAVICNRHQAFVKASNQISRLQLIDT 169


>gi|148806869 hypothetical protein LOC26175 isoform 2 [Homo sapiens]
          Length = 131

 Score =  274 bits (700), Expect = 3e-74
 Identities = 131/131 (100%), Positives = 131/131 (100%)

Query: 39  MMNFRQRMGWIGVGLYLLASAAAFYYVFEISETYNRLALEHIQQHPEEPLEGTTWTHSLK 98
           MMNFRQRMGWIGVGLYLLASAAAFYYVFEISETYNRLALEHIQQHPEEPLEGTTWTHSLK
Sbjct: 1   MMNFRQRMGWIGVGLYLLASAAAFYYVFEISETYNRLALEHIQQHPEEPLEGTTWTHSLK 60

Query: 99  AQLLSLPFWVWTVIFLVPYLQMFLFLYSCTRADPKTVGYCIIPICLAVICNRHQAFVKAS 158
           AQLLSLPFWVWTVIFLVPYLQMFLFLYSCTRADPKTVGYCIIPICLAVICNRHQAFVKAS
Sbjct: 61  AQLLSLPFWVWTVIFLVPYLQMFLFLYSCTRADPKTVGYCIIPICLAVICNRHQAFVKAS 120

Query: 159 NQISRLQLIDT 169
           NQISRLQLIDT
Sbjct: 121 NQISRLQLIDT 131


>gi|4502641 chemokine (C-C motif) receptor 7 precursor [Homo
           sapiens]
          Length = 378

 Score = 27.7 bits (60), Expect = 4.9
 Identities = 19/71 (26%), Positives = 35/71 (49%), Gaps = 9/71 (12%)

Query: 101 LLSLPFWVWTV----IFLVPYLQMFLFLYSCTRADPKTVGYCI-----IPICLAVICNRH 151
           LL+LPFW ++     +F V + ++   +Y  +      +  CI     + I  AV  +RH
Sbjct: 108 LLTLPFWAYSAAKSWVFGVHFCKLIFAIYKMSFFSGMLLLLCISIDRYVAIVQAVSAHRH 167

Query: 152 QAFVKASNQIS 162
           +A V   +++S
Sbjct: 168 RARVLLISKLS 178


>gi|218084958 anoctamin 4 [Homo sapiens]
          Length = 920

 Score = 27.3 bits (59), Expect = 6.4
 Identities = 13/56 (23%), Positives = 28/56 (50%), Gaps = 3/56 (5%)

Query: 107 WVWTVIFLVPYLQMFLFLYSCTRADPKTVGYCI---IPICLAVICNRHQAFVKASN 159
           W   ++F   ++ +F+FLY  T  D   V   +     I +  +C+++  F++ S+
Sbjct: 321 WYTGMLFPAAFIGLFVFLYGVTTLDHSQVSKEVCQATDIIMCPVCDKYCPFMRLSD 376


>gi|38788372 aquarius [Homo sapiens]
          Length = 1485

 Score = 27.3 bits (59), Expect = 6.4
 Identities = 13/43 (30%), Positives = 22/43 (51%), Gaps = 2/43 (4%)

Query: 51   VGLYLLASAAAFYYVFEISETYNRLALEHIQQH--PEEPLEGT 91
            +GLY+ A  + F   FE++  +++L    +  H  P EP   T
Sbjct: 1299 LGLYIFARVSLFQNCFELTPAFSQLTARPLHLHIIPTEPFPTT 1341


>gi|90855771 hypothetical protein LOC55744 [Homo sapiens]
          Length = 146

 Score = 26.9 bits (58), Expect = 8.4
 Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 3/37 (8%)

Query: 52 GLYLLASAAAFYYV---FEISETYNRLALEHIQQHPE 85
          G++     A  YY+   F     Y +LA+E +Q HPE
Sbjct: 23 GVFYAGGFAIVYYLIQKFHSRALYYKLAVEQLQSHPE 59


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.327    0.139    0.450 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,642,428
Number of Sequences: 37866
Number of extensions: 261821
Number of successful extensions: 805
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 803
Number of HSP's gapped (non-prelim): 7
length of query: 169
length of database: 18,247,518
effective HSP length: 95
effective length of query: 74
effective length of database: 14,650,248
effective search space: 1084118352
effective search space used: 1084118352
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.