Search of human proteins with 14861836

Search of human proteins with 14861836

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|14861836 alpha-1,3-mannosyltransferase ALG2 [Homo sapiens]
         (416 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|14861836 alpha-1,3-mannosyltransferase ALG2 [Homo sapiens]         843   0.0  
gi|51889724 asparagine-linked glycosylation 11 [Homo sapiens]          64   3e-10
gi|21389559 glycosyltransferase 1 domain containing 1 [Homo sapi...    43   5e-04
gi|122937205 carcinoembryonic antigen-related cell adhesion mole...    31   1.8  
gi|39995082 NOL1/NOP2/Sun domain family, member 2 [Homo sapiens]       30   3.1  
gi|16506287 ODC antizyme inhibitor-2 [Homo sapiens]                    30   3.1  
gi|153085395 histone deacetylase 4 [Homo sapiens]                      29   6.9  

>gi|14861836 alpha-1,3-mannosyltransferase ALG2 [Homo sapiens]
          Length = 416

 Score =  843 bits (2178), Expect = 0.0
 Identities = 416/416 (100%), Positives = 416/416 (100%)

Query: 1   MAEEQGRERDSVPKPSVLFLHPDLGVGGAERLVLDAALALQARGCSVKIWTAHYDPGHCF 60
           MAEEQGRERDSVPKPSVLFLHPDLGVGGAERLVLDAALALQARGCSVKIWTAHYDPGHCF
Sbjct: 1   MAEEQGRERDSVPKPSVLFLHPDLGVGGAERLVLDAALALQARGCSVKIWTAHYDPGHCF 60

Query: 61  AESRELPVRCAGDWLPRGLGWGGRGAAVCAYVRMVFLALYVLFLADEEFDVVVCDQVSAC 120
           AESRELPVRCAGDWLPRGLGWGGRGAAVCAYVRMVFLALYVLFLADEEFDVVVCDQVSAC
Sbjct: 61  AESRELPVRCAGDWLPRGLGWGGRGAAVCAYVRMVFLALYVLFLADEEFDVVVCDQVSAC 120

Query: 121 IPVFRLARRRKKILFYCHFPDLLLTKRDSFLKRLYRAPIDWIEEYTTGMADCILVNSQFT 180
           IPVFRLARRRKKILFYCHFPDLLLTKRDSFLKRLYRAPIDWIEEYTTGMADCILVNSQFT
Sbjct: 121 IPVFRLARRRKKILFYCHFPDLLLTKRDSFLKRLYRAPIDWIEEYTTGMADCILVNSQFT 180

Query: 181 AAVFKETFKSLSHIDPDVLYPSLNVTSFDSVVPEKLDDLVPKGKKFLLLSINRYERKKNL 240
           AAVFKETFKSLSHIDPDVLYPSLNVTSFDSVVPEKLDDLVPKGKKFLLLSINRYERKKNL
Sbjct: 181 AAVFKETFKSLSHIDPDVLYPSLNVTSFDSVVPEKLDDLVPKGKKFLLLSINRYERKKNL 240

Query: 241 TLALEALVQLRGRLTSQDWERVHLIVAGGYDERVLENVEHYQELKKMVQQSDLGQYVTFL 300
           TLALEALVQLRGRLTSQDWERVHLIVAGGYDERVLENVEHYQELKKMVQQSDLGQYVTFL
Sbjct: 241 TLALEALVQLRGRLTSQDWERVHLIVAGGYDERVLENVEHYQELKKMVQQSDLGQYVTFL 300

Query: 301 RSFSDKQKISLLHSCTCVLYTPSNEHFGIVPLEAMYMQCPVIAVNSGGPLESIDHSVTGF 360
           RSFSDKQKISLLHSCTCVLYTPSNEHFGIVPLEAMYMQCPVIAVNSGGPLESIDHSVTGF
Sbjct: 301 RSFSDKQKISLLHSCTCVLYTPSNEHFGIVPLEAMYMQCPVIAVNSGGPLESIDHSVTGF 360

Query: 361 LCEPDPVHFSEAIEKFIREPSLKATMGLAGRARVKEKFSPEAFTEQLYRYVTKLLV 416
           LCEPDPVHFSEAIEKFIREPSLKATMGLAGRARVKEKFSPEAFTEQLYRYVTKLLV
Sbjct: 361 LCEPDPVHFSEAIEKFIREPSLKATMGLAGRARVKEKFSPEAFTEQLYRYVTKLLV 416


>gi|51889724 asparagine-linked glycosylation 11 [Homo sapiens]
          Length = 492

 Score = 63.9 bits (154), Expect = 3e-10
 Identities = 64/270 (23%), Positives = 118/270 (43%), Gaps = 13/270 (4%)

Query: 149 SFLKRLYRAPIDWIEEYTTGMADCILVNSQFTAAVFKETFKSLSHIDPDVLYPSLNVTSF 208
           S +K +Y     +I       +D ++VNS +T       +K  +  +  ++YP  +V +F
Sbjct: 230 SKVKLIYYYLFAFIYGLVGSCSDVVMVNSSWTLNHILSLWKVGNCTN--IVYPPCDVQTF 287

Query: 209 DSVVPEKLDDLVPKGKKFLLLSINRYERKKNLTLALEALVQLRGRLTSQDWERVHLIVAG 268
             + P     + P     LL+S+ ++  +KN  L + A  +L  +   +    + L++ G
Sbjct: 288 LDI-PLHEKKMTPG---HLLVSVGQFRPEKNHPLQIRAFAKLLNKKMVESPPSLKLVLIG 343

Query: 269 GYDERVLENVEHYQELKKMVQQSDLGQYVTFLRSFSDKQKISLLHSCTCVLYTPSNEHFG 328
           G   +  ++     +L+++ +   + +YV F  +    +  + L   T  L+T  NEHFG
Sbjct: 344 GCRNK--DDELRVNQLRRLSEDLGVQEYVEFKINIPFDELKNYLSEATIGLHTMWNEHFG 401

Query: 329 IVPLEAMYMQCPVIAVNSGGPLESI----DHSVTGFLCEPDPVHFSEAIEKFIREPSLKA 384
           I  +E M     ++A NSGGP   I    +  +TGFL E +   ++E I   +   + K 
Sbjct: 402 IGVVECMAAGTIILAHNSGGPKLDIVIPHEGDITGFLAESEE-DYAETIAHILSMSAEKR 460

Query: 385 TMGLAGRARVKEKFSPEAFTEQLYRYVTKL 414
                       +FS + F       V KL
Sbjct: 461 LQIRKSARASVSRFSDQEFEVTFLSSVEKL 490


>gi|21389559 glycosyltransferase 1 domain containing 1 [Homo
           sapiens]
          Length = 266

 Score = 43.1 bits (100), Expect = 5e-04
 Identities = 27/105 (25%), Positives = 52/105 (49%), Gaps = 1/105 (0%)

Query: 310 SLLHSCTCVLYTPSNEHFGIVPLEAMYMQCPVIAVNSGGPLESIDHSVTGFLCEPDPVHF 369
           +++ +C  V+ +  +E      LEAM ++ PV+A N  G    + H VTG L   +P  F
Sbjct: 157 AVVKNCFAVVNSSVSEGMSAAILEAMDLEVPVLARNIPGNAAVVKHEVTGLLFS-NPQEF 215

Query: 370 SEAIEKFIREPSLKATMGLAGRARVKEKFSPEAFTEQLYRYVTKL 414
               ++ + +P+L+  + + GR  V+   S +   +   + + KL
Sbjct: 216 VHLAKRLVSDPALEKEIVVNGREYVRMYHSWQVERDTYQQLIRKL 260


>gi|122937205 carcinoembryonic antigen-related cell adhesion
           molecule 18 [Homo sapiens]
          Length = 398

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 30/120 (25%), Positives = 53/120 (44%), Gaps = 17/120 (14%)

Query: 161 WIEEYTTGMADCILVNSQFTAAVFKETFKSLSHIDPDVLYPSLNVTSFDSVVPEKLDD-- 218
           W+E    G    I VN+           +++  +  D L    N+T + + VP    D  
Sbjct: 190 WLEVLELGSNLGISVNAS-------SLVENMDSVAADCLTNVTNITWYVNDVPTSSSDRM 242

Query: 219 -LVPKGKKFLLLSINRYERKKNLTLALEALVQLRGRLTSQDWERVHLIVAGGYDERVLEN 277
            + P GK  ++L ++RY+R   +   +E+  ++      Q  ER+ L VA G D  +L +
Sbjct: 243 TISPDGKTLVILRVSRYDR--TIQCMIESFPEI-----FQRSERISLTVAYGPDYVLLRS 295


>gi|39995082 NOL1/NOP2/Sun domain family, member 2 [Homo sapiens]
          Length = 767

 Score = 30.4 bits (67), Expect = 3.1
 Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 2/36 (5%)

Query: 268 GGYDERVLEN--VEHYQELKKMVQQSDLGQYVTFLR 301
           GGY E V EN   EHY +  K+V + + GQ++  LR
Sbjct: 36  GGYPEIVKENKLFEHYYQELKIVPEGEWGQFMDALR 71


>gi|16506287 ODC antizyme inhibitor-2 [Homo sapiens]
          Length = 460

 Score = 30.4 bits (67), Expect = 3.1
 Identities = 39/142 (27%), Positives = 56/142 (39%), Gaps = 24/142 (16%)

Query: 1   MAEEQGRERDSVPKPSVLFLHPDLGVGGAERLVLDAALA----LQARGC------SVKIW 50
           + ++ GRE ++      +  H D GV G    VL   +     LQ +        S  +W
Sbjct: 298 LLDQPGREEENGSTSKTIVYHLDEGVYGIFNSVLFDNICPTPILQKKPSTEQPLYSSSLW 357

Query: 51  TAHYDPGHCFAESRELPVRCAGDWL--------PRGLG---WGGRGAAVC-AYVRMVFLA 98
               D   C AE   LP    GDWL          G+G   WG +   +  A  R+ + A
Sbjct: 358 GPAVDGCDCVAEGLWLPQLHVGDWLVFDNMGAYTVGMGSPFWGTQACHITYAMSRVAWEA 417

Query: 99  LYVLFLADEEFDVV--VCDQVS 118
           L    +A E+ D V  VC  +S
Sbjct: 418 LRRQLMAAEQEDDVEGVCKPLS 439


>gi|153085395 histone deacetylase 4 [Homo sapiens]
          Length = 1084

 Score = 29.3 bits (64), Expect = 6.9
 Identities = 16/81 (19%), Positives = 43/81 (53%)

Query: 233 RYERKKNLTLALEALVQLRGRLTSQDWERVHLIVAGGYDERVLENVEHYQELKKMVQQSD 292
           R ++ +   LAL+   Q++ ++   +++R H  ++  ++ ++ E+++  QE+  M  Q +
Sbjct: 67  REQQLQQELLALKQKQQIQRQILIAEFQRQHEQLSRQHEAQLHEHIKQQQEMLAMKHQQE 126

Query: 293 LGQYVTFLRSFSDKQKISLLH 313
           L ++   L     +Q++   H
Sbjct: 127 LLEHQRKLERHRQEQELEKQH 147


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.324    0.139    0.427 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,878,692
Number of Sequences: 37866
Number of extensions: 708294
Number of successful extensions: 1315
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 1309
Number of HSP's gapped (non-prelim): 8
length of query: 416
length of database: 18,247,518
effective HSP length: 105
effective length of query: 311
effective length of database: 14,271,588
effective search space: 4438463868
effective search space used: 4438463868
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.