Guide to the Human Genome
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Search of human proteins with 148536836

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|148536836 C-type lectin domain family 4, member A isoform 3
[Homo sapiens]
         (198 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|148536836 C-type lectin domain family 4, member A isoform 3 [...   424   e-119
gi|7705338 C-type lectin domain family 4, member A isoform 1 [Ho...   404   e-113
gi|37577119 C-type lectin domain family 4, member A isoform 2 [H...   345   1e-95
gi|37577117 C-type lectin domain family 4, member A isoform 4 [H...   342   2e-94
gi|18466806 C-type lectin domain family 4, member C isoform 1 [H...   209   1e-54
gi|45580692 C-type lectin domain family 4, member C isoform 2 [H...   208   2e-54
gi|55742774 dectin-2 [Homo sapiens]                                   174   3e-44
gi|31542313 C-type lectin domain family 4, member D [Homo sapiens]    147   6e-36
gi|7657333 C-type lectin domain family 4, member E [Homo sapiens]     124   4e-29
gi|53832016 C-type lectin, superfamily member 14 isoform 2 [Homo...    97   1e-20
gi|33667103 C-type lectin, superfamily member 14 isoform 1 [Homo...    96   2e-20
gi|223278347 C-type lectin domain family 4, member M isoform 9 [...    89   2e-18
gi|223278339 C-type lectin domain family 4, member M isoform 7 [...    89   2e-18
gi|223278337 C-type lectin domain family 4, member M isoform 12 ...    89   2e-18
gi|223278335 C-type lectin domain family 4, member M isoform 2 [...    89   2e-18
gi|223278350 C-type lectin domain family 4, member M isoform 8 [...    89   2e-18
gi|223278342 C-type lectin domain family 4, member M isoform 11 ...    89   2e-18
gi|42542390 C-type lectin domain family 4, member M isoform 1 [H...    89   2e-18
gi|18426877 asialoglycoprotein receptor 2 isoform c [Homo sapiens]     86   2e-17
gi|18426875 asialoglycoprotein receptor 2 isoform b [Homo sapiens]     86   2e-17
gi|18426873 asialoglycoprotein receptor 2 isoform a [Homo sapiens]     86   2e-17
gi|4502253 asialoglycoprotein receptor 2 isoform a [Homo sapiens]      86   2e-17
gi|18641360 collectin sub-family member 12 [Homo sapiens]              85   5e-17
gi|4502251 asialoglycoprotein receptor 1 [Homo sapiens]                84   8e-17
gi|223029517 CD209 molecule isoform 8 [Homo sapiens]                   80   1e-15
gi|90991712 CD207 antigen, langerin [Homo sapiens]                     80   1e-15
gi|223029386 CD209 molecule isoform 3 [Homo sapiens]                   79   2e-15
gi|223029384 CD209 molecule isoform 7 [Homo sapiens]                   79   2e-15
gi|223029382 CD209 molecule isoform 6 [Homo sapiens]                   79   2e-15
gi|223029380 CD209 molecule isoform 5 [Homo sapiens]                   79   2e-15

>gi|148536836 C-type lectin domain family 4, member A isoform 3
           [Homo sapiens]
          Length = 198

 Score =  424 bits (1090), Expect = e-119
 Identities = 198/198 (100%), Positives = 198/198 (100%)

Query: 1   MTSEITYAEVRFKNEFKSSGINTASSAVFFQKYSQLLEKKTTKELVHTTLECVKKNMPVE 60
           MTSEITYAEVRFKNEFKSSGINTASSAVFFQKYSQLLEKKTTKELVHTTLECVKKNMPVE
Sbjct: 1   MTSEITYAEVRFKNEFKSSGINTASSAVFFQKYSQLLEKKTTKELVHTTLECVKKNMPVE 60

Query: 61  ETAWSCCPKNWKSFSSNCYFISTESASWQDSEKDCARMEAHLLVINTQEEQDFIFQNLQE 120
           ETAWSCCPKNWKSFSSNCYFISTESASWQDSEKDCARMEAHLLVINTQEEQDFIFQNLQE
Sbjct: 61  ETAWSCCPKNWKSFSSNCYFISTESASWQDSEKDCARMEAHLLVINTQEEQDFIFQNLQE 120

Query: 121 ESAYFVGLSDPEGQRHWQWVDQTPYNESSTFWHPREPSDPNERCVVLNFRKSPKRWGWND 180
           ESAYFVGLSDPEGQRHWQWVDQTPYNESSTFWHPREPSDPNERCVVLNFRKSPKRWGWND
Sbjct: 121 ESAYFVGLSDPEGQRHWQWVDQTPYNESSTFWHPREPSDPNERCVVLNFRKSPKRWGWND 180

Query: 181 VNCLGPQRSVCEMMKIHL 198
           VNCLGPQRSVCEMMKIHL
Sbjct: 181 VNCLGPQRSVCEMMKIHL 198


>gi|7705338 C-type lectin domain family 4, member A isoform 1 [Homo
           sapiens]
          Length = 237

 Score =  404 bits (1039), Expect = e-113
 Identities = 197/237 (83%), Positives = 198/237 (83%), Gaps = 39/237 (16%)

Query: 1   MTSEITYAEVRFKNEFKSSGINTASSA--------------------------------- 27
           MTSEITYAEVRFKNEFKSSGINTASSA                                 
Sbjct: 1   MTSEITYAEVRFKNEFKSSGINTASSAASKERTAPHKSNTGFPKLLCASLLIFFLLLAIS 60

Query: 28  ------VFFQKYSQLLEKKTTKELVHTTLECVKKNMPVEETAWSCCPKNWKSFSSNCYFI 81
                 +FFQKYSQLLEKKTTKELVHTTLECVKKNMPVEETAWSCCPKNWKSFSSNCYFI
Sbjct: 61  FFIAFVIFFQKYSQLLEKKTTKELVHTTLECVKKNMPVEETAWSCCPKNWKSFSSNCYFI 120

Query: 82  STESASWQDSEKDCARMEAHLLVINTQEEQDFIFQNLQEESAYFVGLSDPEGQRHWQWVD 141
           STESASWQDSEKDCARMEAHLLVINTQEEQDFIFQNLQEESAYFVGLSDPEGQRHWQWVD
Sbjct: 121 STESASWQDSEKDCARMEAHLLVINTQEEQDFIFQNLQEESAYFVGLSDPEGQRHWQWVD 180

Query: 142 QTPYNESSTFWHPREPSDPNERCVVLNFRKSPKRWGWNDVNCLGPQRSVCEMMKIHL 198
           QTPYNESSTFWHPREPSDPNERCVVLNFRKSPKRWGWNDVNCLGPQRSVCEMMKIHL
Sbjct: 181 QTPYNESSTFWHPREPSDPNERCVVLNFRKSPKRWGWNDVNCLGPQRSVCEMMKIHL 237


>gi|37577119 C-type lectin domain family 4, member A isoform 2 [Homo
           sapiens]
          Length = 204

 Score =  345 bits (886), Expect = 1e-95
 Identities = 168/206 (81%), Positives = 175/206 (84%), Gaps = 10/206 (4%)

Query: 1   MTSEITYAEVRFKNEFKSSGINTASSAVFFQKYSQLLEKKTT--------KELVHTTLEC 52
           MTSEITYAEVRFKNEFKSSGINTASSA   ++ +    K  T          L+   L  
Sbjct: 1   MTSEITYAEVRFKNEFKSSGINTASSAASKERTAP--HKSNTGFPKLLCASLLIFFLLLA 58

Query: 53  VKKNMPVEETAWSCCPKNWKSFSSNCYFISTESASWQDSEKDCARMEAHLLVINTQEEQD 112
           +   +   +TAWSCCPKNWKSFSSNCYFISTESASWQDSEKDCARMEAHLLVINTQEEQD
Sbjct: 59  ISFFIAFVKTAWSCCPKNWKSFSSNCYFISTESASWQDSEKDCARMEAHLLVINTQEEQD 118

Query: 113 FIFQNLQEESAYFVGLSDPEGQRHWQWVDQTPYNESSTFWHPREPSDPNERCVVLNFRKS 172
           FIFQNLQEESAYFVGLSDPEGQRHWQWVDQTPYNESSTFWHPREPSDPNERCVVLNFRKS
Sbjct: 119 FIFQNLQEESAYFVGLSDPEGQRHWQWVDQTPYNESSTFWHPREPSDPNERCVVLNFRKS 178

Query: 173 PKRWGWNDVNCLGPQRSVCEMMKIHL 198
           PKRWGWNDVNCLGPQRSVCEMMKIHL
Sbjct: 179 PKRWGWNDVNCLGPQRSVCEMMKIHL 204


>gi|37577117 C-type lectin domain family 4, member A isoform 4 [Homo
           sapiens]
          Length = 165

 Score =  342 bits (876), Expect = 2e-94
 Identities = 165/198 (83%), Positives = 165/198 (83%), Gaps = 33/198 (16%)

Query: 1   MTSEITYAEVRFKNEFKSSGINTASSAVFFQKYSQLLEKKTTKELVHTTLECVKKNMPVE 60
           MTSEITYAEVRFKNEFKSSGINTASSA                                 
Sbjct: 1   MTSEITYAEVRFKNEFKSSGINTASSA--------------------------------- 27

Query: 61  ETAWSCCPKNWKSFSSNCYFISTESASWQDSEKDCARMEAHLLVINTQEEQDFIFQNLQE 120
           ETAWSCCPKNWKSFSSNCYFISTESASWQDSEKDCARMEAHLLVINTQEEQDFIFQNLQE
Sbjct: 28  ETAWSCCPKNWKSFSSNCYFISTESASWQDSEKDCARMEAHLLVINTQEEQDFIFQNLQE 87

Query: 121 ESAYFVGLSDPEGQRHWQWVDQTPYNESSTFWHPREPSDPNERCVVLNFRKSPKRWGWND 180
           ESAYFVGLSDPEGQRHWQWVDQTPYNESSTFWHPREPSDPNERCVVLNFRKSPKRWGWND
Sbjct: 88  ESAYFVGLSDPEGQRHWQWVDQTPYNESSTFWHPREPSDPNERCVVLNFRKSPKRWGWND 147

Query: 181 VNCLGPQRSVCEMMKIHL 198
           VNCLGPQRSVCEMMKIHL
Sbjct: 148 VNCLGPQRSVCEMMKIHL 165


>gi|18466806 C-type lectin domain family 4, member C isoform 1 [Homo
           sapiens]
          Length = 213

 Score =  209 bits (532), Expect = 1e-54
 Identities = 96/180 (53%), Positives = 127/180 (70%), Gaps = 7/180 (3%)

Query: 23  TASSAV----FFQKYSQLLEKKTTKELVHTTLECVKKNMPVEETAWSCCPKNWKSFSSNC 78
           T SS V     + K  + L K    +  H +L CV +   +E+  WSCCP  W SF S+C
Sbjct: 37  TVSSVVPHNFMYSKTVKRLSKLREYQQYHPSLTCVMEGKDIED--WSCCPTPWTSFQSSC 94

Query: 79  YFISTESASWQDSEKDCARMEAHLLVINTQEEQDFIFQNLQEESAYFVGLSDPEGQRHWQ 138
           YFIST   SW  S+K+C+ M A L+VINT+EEQDFI QNL+  S+YF+GLSDP G+RHWQ
Sbjct: 95  YFISTGMQSWTKSQKNCSVMGADLVVINTREEQDFIIQNLKRNSSYFLGLSDPGGRRHWQ 154

Query: 139 WVDQTPYNESSTFWHPREPSDPNERCVVLNFRKSPKRWGWNDVNCLGPQRSVCEMMKIHL 198
           WVDQTPYNE+ TFWH  EP++ +ERC ++NFR S + WGWND++C  PQ+S+C+M KI++
Sbjct: 155 WVDQTPYNENVTFWHSGEPNNLDERCAIINFRSS-EEWGWNDIHCHVPQKSICKMKKIYI 213


>gi|45580692 C-type lectin domain family 4, member C isoform 2 [Homo
           sapiens]
          Length = 182

 Score =  208 bits (530), Expect = 2e-54
 Identities = 92/169 (54%), Positives = 123/169 (72%), Gaps = 3/169 (1%)

Query: 30  FQKYSQLLEKKTTKELVHTTLECVKKNMPVEETAWSCCPKNWKSFSSNCYFISTESASWQ 89
           + K  + L K    +  H +L CV +   +E+  WSCCP  W SF S+CYFIST   SW 
Sbjct: 17  YSKTVKRLSKLREYQQYHPSLTCVMEGKDIED--WSCCPTPWTSFQSSCYFISTGMQSWT 74

Query: 90  DSEKDCARMEAHLLVINTQEEQDFIFQNLQEESAYFVGLSDPEGQRHWQWVDQTPYNESS 149
            S+K+C+ M A L+VINT+EEQDFI QNL+  S+YF+GLSDP G+RHWQWVDQTPYNE+ 
Sbjct: 75  KSQKNCSVMGADLVVINTREEQDFIIQNLKRNSSYFLGLSDPGGRRHWQWVDQTPYNENV 134

Query: 150 TFWHPREPSDPNERCVVLNFRKSPKRWGWNDVNCLGPQRSVCEMMKIHL 198
           TFWH  EP++ +ERC ++NFR S + WGWND++C  PQ+S+C+M KI++
Sbjct: 135 TFWHSGEPNNLDERCAIINFRSS-EEWGWNDIHCHVPQKSICKMKKIYI 182


>gi|55742774 dectin-2 [Homo sapiens]
          Length = 209

 Score =  174 bits (442), Expect = 3e-44
 Identities = 77/152 (50%), Positives = 102/152 (67%), Gaps = 3/152 (1%)

Query: 47  HTTLECVKKNMPVEETAWSCCPKNWKSFSSNCYFISTESASWQDSEKDCARMEAHLLVIN 106
           H++L C  +   V   AW CCP +WKSF S+CYFIS+E   W  SE++C  M AHL+V N
Sbjct: 61  HSSLTCFSEGTKVP--AWGCCPASWKSFGSSCYFISSEEKVWSKSEQNCVEMGAHLVVFN 118

Query: 107 TQEEQDFIFQNLQEESAYFVGLSDPEGQRHWQWVDQTPYNESSTFWHPREPSDPNERCVV 166
           T+ EQ+FI Q L E  +YF+GLSDP+G  +WQW+D+TPY ++  FWH  EP+   E+C  
Sbjct: 119 TEAEQNFIVQQLNESFSYFLGLSDPQGNNNWQWIDKTPYEKNVRFWHLGEPNHSAEQCAS 178

Query: 167 LNFRKSPKRWGWNDVNCLGPQRSVCEMMKIHL 198
           + F K P  WGWNDV C   + S+CEM KI+L
Sbjct: 179 IVFWK-PTGWGWNDVICETRRNSICEMNKIYL 209


>gi|31542313 C-type lectin domain family 4, member D [Homo sapiens]
          Length = 215

 Score =  147 bits (371), Expect = 6e-36
 Identities = 63/151 (41%), Positives = 95/151 (62%), Gaps = 6/151 (3%)

Query: 47  HTTLECVKKNMPV---EETAWSCCPKNWKSFSSNCYFISTESASWQDSEKDCARMEAHLL 103
           H  L+C+K+   +   E + W+CCP +W++F SNCYF  T++ +W +SE++C+ M AHL+
Sbjct: 61  HAKLKCIKEKSELKSAEGSTWNCCPIDWRAFQSNCYFPLTDNKTWAESERNCSGMGAHLM 120

Query: 104 VINTQEEQDFIFQNLQEESAYFVGLSDPEGQRHWQWVDQTPYNESSTFWHPREP-SDPNE 162
            I+T+ EQ+FI Q L    +YF+GL D   +  W+WVDQTP+N    FWH  EP +   E
Sbjct: 121 TISTEAEQNFIIQFLDRRLSYFLGLRDENAKGQWRWVDQTPFNPRRVFWHKNEPDNSQGE 180

Query: 163 RCVVLNFRKSPKRWGWNDVNCLGPQRSVCEM 193
            CVVL + +   +W WNDV C      +C++
Sbjct: 181 NCVVLVYNQD--KWAWNDVPCNFEASRICKI 209


>gi|7657333 C-type lectin domain family 4, member E [Homo sapiens]
          Length = 219

 Score =  124 bits (312), Expect = 4e-29
 Identities = 67/172 (38%), Positives = 94/172 (54%), Gaps = 6/172 (3%)

Query: 28  VFFQKYSQLLEKKTTKELVHTTLECVKKNMPVEETAWSCCPKNWKSFSSNCYFISTESAS 87
           V F+ +    EKK       T L C         +  +CCP NW+ F S+CYF ST++ S
Sbjct: 44  VTFRIFQTCDEKKFQLPENFTELSCYNYG---SGSVKNCCPLNWEYFQSSCYFFSTDTIS 100

Query: 88  WQDSEKDCARMEAHLLVINTQEEQDFIFQNLQEESAYFVGLSDPEGQRHWQWVDQTPYNE 147
           W  S K+C+ M AHL+VIN+QEEQ+F+     +   +F+GLSD   +  WQWVD TP  +
Sbjct: 101 WALSLKNCSAMGAHLVVINSQEEQEFLSYKKPKMREFFIGLSDQVVEGQWQWVDGTPLTK 160

Query: 148 SSTFWHPREPSD--PNERCVVLNFRKSPKRWGWNDVNCLGPQRSVCEMMKIH 197
           S +FW   EP++    E C  +    +P R  WNDV C      +CEM+ I+
Sbjct: 161 SLSFWDVGEPNNIATLEDCATMRDSSNP-RQNWNDVTCFLNYFRICEMVGIN 211


>gi|53832016 C-type lectin, superfamily member 14 isoform 2 [Homo
           sapiens]
          Length = 292

 Score = 96.7 bits (239), Expect = 1e-20
 Identities = 61/164 (37%), Positives = 83/164 (50%), Gaps = 19/164 (11%)

Query: 39  KKTTKELVHTTLECVKKNMPVEE--TAWSCCPKNWKSFSSNCYFISTESASWQDSEKDCA 96
           ++  ++L   T +    N   EE  T  +CCP NW     +CY+ S    SW ++EK C 
Sbjct: 127 QQLVQDLKKLTCQVATLNNNGEEASTEGTCCPVNWVEHQDSCYWFSHSGMSWAEAEKYCQ 186

Query: 97  RMEAHLLVINTQEEQDFIFQNLQEESAY-FVGLSDPEGQRHWQWVDQTPYNESSTFWHPR 155
              AHL+VIN++EEQ+F+ + L   SAY ++GLSDPEG   W+WVD T Y      W P 
Sbjct: 187 LKNAHLVVINSREEQNFVQKYL--GSAYTWMGLSDPEGA--WKWVDGTDYATGFQNWKPG 242

Query: 156 EPSD-------PNERCVVLNFRKSPKRWGWNDVNCLGPQRSVCE 192
           +P D         E C   +F    +   WND  C  P   VCE
Sbjct: 243 QPDDWQGHGLGGGEDCA--HFHPDGR---WNDDVCQRPYHWVCE 281


>gi|33667103 C-type lectin, superfamily member 14 isoform 1 [Homo
           sapiens]
          Length = 316

 Score = 95.9 bits (237), Expect = 2e-20
 Identities = 56/139 (40%), Positives = 73/139 (52%), Gaps = 17/139 (12%)

Query: 62  TAWSCCPKNWKSFSSNCYFISTESASWQDSEKDCARMEAHLLVINTQEEQDFIFQNLQEE 121
           T  +CCP NW     +CY+ S    SW ++EK C    AHL+VIN++EEQ+F+ + L   
Sbjct: 176 TEGTCCPVNWVEHQDSCYWFSHSGMSWAEAEKYCQLKNAHLVVINSREEQNFVQKYL--G 233

Query: 122 SAY-FVGLSDPEGQRHWQWVDQTPYNESSTFWHPREPSD-------PNERCVVLNFRKSP 173
           SAY ++GLSDPEG   W+WVD T Y      W P +P D         E C   +F    
Sbjct: 234 SAYTWMGLSDPEGA--WKWVDGTDYATGFQNWKPGQPDDWQGHGLGGGEDCA--HFHPDG 289

Query: 174 KRWGWNDVNCLGPQRSVCE 192
           +   WND  C  P   VCE
Sbjct: 290 R---WNDDVCQRPYHWVCE 305


>gi|223278347 C-type lectin domain family 4, member M isoform 9
           [Homo sapiens]
          Length = 353

 Score = 89.0 bits (219), Expect = 2e-18
 Identities = 48/120 (40%), Positives = 65/120 (54%), Gaps = 9/120 (7%)

Query: 67  CPKNWKSFSSNCYFISTESASWQDSEKDCARMEAHLLVINTQEEQDFI-FQNLQEESAYF 125
           CPK+W  F  NCYF+S    +W DS   C  + A L+VI T EEQ+F+  Q  +     +
Sbjct: 222 CPKDWTFFQGNCYFMSNSQRNWHDSVTACQEVRAQLVVIKTAEEQNFLQLQTSRSNRFSW 281

Query: 126 VGLSDPEGQRHWQWVDQTPYNES-STFWHPREPSDP-NERCVVLNFRKSPKRWGWNDVNC 183
           +GLSD   +  WQWVD +P + S   +W+  EP++  NE C    F  S    GWND  C
Sbjct: 282 MGLSDLNQEGTWQWVDGSPLSPSFQRYWNSGEPNNSGNEDCA--EFSGS----GWNDNRC 335


>gi|223278339 C-type lectin domain family 4, member M isoform 7
           [Homo sapiens]
          Length = 263

 Score = 89.0 bits (219), Expect = 2e-18
 Identities = 48/120 (40%), Positives = 65/120 (54%), Gaps = 9/120 (7%)

Query: 67  CPKNWKSFSSNCYFISTESASWQDSEKDCARMEAHLLVINTQEEQDFI-FQNLQEESAYF 125
           CPK+W  F  NCYF+S    +W DS   C  + A L+VI T EEQ+F+  Q  +     +
Sbjct: 132 CPKDWTFFQGNCYFMSNSQRNWHDSVTACQEVRAQLVVIKTAEEQNFLQLQTSRSNRFSW 191

Query: 126 VGLSDPEGQRHWQWVDQTPYNES-STFWHPREPSDP-NERCVVLNFRKSPKRWGWNDVNC 183
           +GLSD   +  WQWVD +P + S   +W+  EP++  NE C    F  S    GWND  C
Sbjct: 192 MGLSDLNQEGTWQWVDGSPLSPSFQRYWNSGEPNNSGNEDCA--EFSGS----GWNDNRC 245


>gi|223278337 C-type lectin domain family 4, member M isoform 12
           [Homo sapiens]
          Length = 375

 Score = 89.0 bits (219), Expect = 2e-18
 Identities = 48/120 (40%), Positives = 65/120 (54%), Gaps = 9/120 (7%)

Query: 67  CPKNWKSFSSNCYFISTESASWQDSEKDCARMEAHLLVINTQEEQDFI-FQNLQEESAYF 125
           CPK+W  F  NCYF+S    +W DS   C  + A L+VI T EEQ+F+  Q  +     +
Sbjct: 244 CPKDWTFFQGNCYFMSNSQRNWHDSVTACQEVRAQLVVIKTAEEQNFLQLQTSRSNRFSW 303

Query: 126 VGLSDPEGQRHWQWVDQTPYNES-STFWHPREPSDP-NERCVVLNFRKSPKRWGWNDVNC 183
           +GLSD   +  WQWVD +P + S   +W+  EP++  NE C    F  S    GWND  C
Sbjct: 304 MGLSDLNQEGTWQWVDGSPLSPSFQRYWNSGEPNNSGNEDCA--EFSGS----GWNDNRC 357


>gi|223278335 C-type lectin domain family 4, member M isoform 2
           [Homo sapiens]
          Length = 348

 Score = 89.0 bits (219), Expect = 2e-18
 Identities = 48/120 (40%), Positives = 65/120 (54%), Gaps = 9/120 (7%)

Query: 67  CPKNWKSFSSNCYFISTESASWQDSEKDCARMEAHLLVINTQEEQDFI-FQNLQEESAYF 125
           CPK+W  F  NCYF+S    +W DS   C  + A L+VI T EEQ+F+  Q  +     +
Sbjct: 217 CPKDWTFFQGNCYFMSNSQRNWHDSVTACQEVRAQLVVIKTAEEQNFLQLQTSRSNRFSW 276

Query: 126 VGLSDPEGQRHWQWVDQTPYNES-STFWHPREPSDP-NERCVVLNFRKSPKRWGWNDVNC 183
           +GLSD   +  WQWVD +P + S   +W+  EP++  NE C    F  S    GWND  C
Sbjct: 277 MGLSDLNQEGTWQWVDGSPLSPSFQRYWNSGEPNNSGNEDCA--EFSGS----GWNDNRC 330


>gi|223278350 C-type lectin domain family 4, member M isoform 8
           [Homo sapiens]
          Length = 376

 Score = 89.0 bits (219), Expect = 2e-18
 Identities = 48/120 (40%), Positives = 65/120 (54%), Gaps = 9/120 (7%)

Query: 67  CPKNWKSFSSNCYFISTESASWQDSEKDCARMEAHLLVINTQEEQDFI-FQNLQEESAYF 125
           CPK+W  F  NCYF+S    +W DS   C  + A L+VI T EEQ+F+  Q  +     +
Sbjct: 245 CPKDWTFFQGNCYFMSNSQRNWHDSVTACQEVRAQLVVIKTAEEQNFLQLQTSRSNRFSW 304

Query: 126 VGLSDPEGQRHWQWVDQTPYNES-STFWHPREPSDP-NERCVVLNFRKSPKRWGWNDVNC 183
           +GLSD   +  WQWVD +P + S   +W+  EP++  NE C    F  S    GWND  C
Sbjct: 305 MGLSDLNQEGTWQWVDGSPLSPSFQRYWNSGEPNNSGNEDCA--EFSGS----GWNDNRC 358


>gi|223278342 C-type lectin domain family 4, member M isoform 11
           [Homo sapiens]
          Length = 332

 Score = 89.0 bits (219), Expect = 2e-18
 Identities = 48/120 (40%), Positives = 65/120 (54%), Gaps = 9/120 (7%)

Query: 67  CPKNWKSFSSNCYFISTESASWQDSEKDCARMEAHLLVINTQEEQDFI-FQNLQEESAYF 125
           CPK+W  F  NCYF+S    +W DS   C  + A L+VI T EEQ+F+  Q  +     +
Sbjct: 201 CPKDWTFFQGNCYFMSNSQRNWHDSVTACQEVRAQLVVIKTAEEQNFLQLQTSRSNRFSW 260

Query: 126 VGLSDPEGQRHWQWVDQTPYNES-STFWHPREPSDP-NERCVVLNFRKSPKRWGWNDVNC 183
           +GLSD   +  WQWVD +P + S   +W+  EP++  NE C    F  S    GWND  C
Sbjct: 261 MGLSDLNQEGTWQWVDGSPLSPSFQRYWNSGEPNNSGNEDCA--EFSGS----GWNDNRC 314


>gi|42542390 C-type lectin domain family 4, member M isoform 1 [Homo
           sapiens]
          Length = 399

 Score = 89.0 bits (219), Expect = 2e-18
 Identities = 48/120 (40%), Positives = 65/120 (54%), Gaps = 9/120 (7%)

Query: 67  CPKNWKSFSSNCYFISTESASWQDSEKDCARMEAHLLVINTQEEQDFI-FQNLQEESAYF 125
           CPK+W  F  NCYF+S    +W DS   C  + A L+VI T EEQ+F+  Q  +     +
Sbjct: 268 CPKDWTFFQGNCYFMSNSQRNWHDSVTACQEVRAQLVVIKTAEEQNFLQLQTSRSNRFSW 327

Query: 126 VGLSDPEGQRHWQWVDQTPYNES-STFWHPREPSDP-NERCVVLNFRKSPKRWGWNDVNC 183
           +GLSD   +  WQWVD +P + S   +W+  EP++  NE C    F  S    GWND  C
Sbjct: 328 MGLSDLNQEGTWQWVDGSPLSPSFQRYWNSGEPNNSGNEDCA--EFSGS----GWNDNRC 381


>gi|18426877 asialoglycoprotein receptor 2 isoform c [Homo sapiens]
          Length = 292

 Score = 86.3 bits (212), Expect = 2e-17
 Identities = 48/135 (35%), Positives = 68/135 (50%), Gaps = 15/135 (11%)

Query: 65  SCCPKNWKSFSSNCYFISTESASWQDSEKDCARMEAHLLVINTQEEQDFIFQNLQEESAY 124
           +CCP NW     +CY+ S    +W ++EK C    AHL+VIN+ EEQ FI Q+    + +
Sbjct: 156 TCCPVNWVEHQGSCYWFSHSGKAWAEAEKYCQLENAHLVVINSWEEQKFIVQHTNPFNTW 215

Query: 125 FVGLSDPEGQRHWQWVDQTPYNESSTFWHPREPSD-------PNERCVVLNFRKSPKRWG 177
            +GL+D +G   W+WVD T Y  +   W   +P +        +E CV +          
Sbjct: 216 -IGLTDSDGS--WKWVDGTDYRHNYKNWAVTQPDNWHGHELGGSEDCVEVQ-----PDGR 267

Query: 178 WNDVNCLGPQRSVCE 192
           WND  CL   R VCE
Sbjct: 268 WNDDFCLQVYRWVCE 282


>gi|18426875 asialoglycoprotein receptor 2 isoform b [Homo sapiens]
          Length = 287

 Score = 86.3 bits (212), Expect = 2e-17
 Identities = 48/135 (35%), Positives = 68/135 (50%), Gaps = 15/135 (11%)

Query: 65  SCCPKNWKSFSSNCYFISTESASWQDSEKDCARMEAHLLVINTQEEQDFIFQNLQEESAY 124
           +CCP NW     +CY+ S    +W ++EK C    AHL+VIN+ EEQ FI Q+    + +
Sbjct: 151 TCCPVNWVEHQGSCYWFSHSGKAWAEAEKYCQLENAHLVVINSWEEQKFIVQHTNPFNTW 210

Query: 125 FVGLSDPEGQRHWQWVDQTPYNESSTFWHPREPSD-------PNERCVVLNFRKSPKRWG 177
            +GL+D +G   W+WVD T Y  +   W   +P +        +E CV +          
Sbjct: 211 -IGLTDSDGS--WKWVDGTDYRHNYKNWAVTQPDNWHGHELGGSEDCVEVQ-----PDGR 262

Query: 178 WNDVNCLGPQRSVCE 192
           WND  CL   R VCE
Sbjct: 263 WNDDFCLQVYRWVCE 277


>gi|18426873 asialoglycoprotein receptor 2 isoform a [Homo sapiens]
          Length = 311

 Score = 86.3 bits (212), Expect = 2e-17
 Identities = 48/135 (35%), Positives = 68/135 (50%), Gaps = 15/135 (11%)

Query: 65  SCCPKNWKSFSSNCYFISTESASWQDSEKDCARMEAHLLVINTQEEQDFIFQNLQEESAY 124
           +CCP NW     +CY+ S    +W ++EK C    AHL+VIN+ EEQ FI Q+    + +
Sbjct: 175 TCCPVNWVEHQGSCYWFSHSGKAWAEAEKYCQLENAHLVVINSWEEQKFIVQHTNPFNTW 234

Query: 125 FVGLSDPEGQRHWQWVDQTPYNESSTFWHPREPSD-------PNERCVVLNFRKSPKRWG 177
            +GL+D +G   W+WVD T Y  +   W   +P +        +E CV +          
Sbjct: 235 -IGLTDSDGS--WKWVDGTDYRHNYKNWAVTQPDNWHGHELGGSEDCVEVQ-----PDGR 286

Query: 178 WNDVNCLGPQRSVCE 192
           WND  CL   R VCE
Sbjct: 287 WNDDFCLQVYRWVCE 301


>gi|4502253 asialoglycoprotein receptor 2 isoform a [Homo sapiens]
          Length = 311

 Score = 86.3 bits (212), Expect = 2e-17
 Identities = 48/135 (35%), Positives = 68/135 (50%), Gaps = 15/135 (11%)

Query: 65  SCCPKNWKSFSSNCYFISTESASWQDSEKDCARMEAHLLVINTQEEQDFIFQNLQEESAY 124
           +CCP NW     +CY+ S    +W ++EK C    AHL+VIN+ EEQ FI Q+    + +
Sbjct: 175 TCCPVNWVEHQGSCYWFSHSGKAWAEAEKYCQLENAHLVVINSWEEQKFIVQHTNPFNTW 234

Query: 125 FVGLSDPEGQRHWQWVDQTPYNESSTFWHPREPSD-------PNERCVVLNFRKSPKRWG 177
            +GL+D +G   W+WVD T Y  +   W   +P +        +E CV +          
Sbjct: 235 -IGLTDSDGS--WKWVDGTDYRHNYKNWAVTQPDNWHGHELGGSEDCVEVQ-----PDGR 286

Query: 178 WNDVNCLGPQRSVCE 192
           WND  CL   R VCE
Sbjct: 287 WNDDFCLQVYRWVCE 301


>gi|18641360 collectin sub-family member 12 [Homo sapiens]
          Length = 742

 Score = 84.7 bits (208), Expect = 5e-17
 Identities = 42/144 (29%), Positives = 72/144 (50%), Gaps = 13/144 (9%)

Query: 55  KNMPVEETAWSCCPKNWKSFSSNCYFISTESASWQDSEKDCARMEAHLLVINTQEEQDFI 114
           +N P      + CP +WK+F+  CY+ S E   ++D++  C    +HL+ INT+EEQ +I
Sbjct: 595 QNEPTPAPEDNGCPPHWKNFTDKCYYFSVEKEIFEDAKLFCEDKSSHLVFINTREEQQWI 654

Query: 115 FQNLQEESAYFVGLSDPEGQRHWQWVDQTPYNESSTFWHPREPSD------PNERCVVLN 168
            + +    ++++GL+D E +  W+W+D T  +  +  W   +P +      P E C  L 
Sbjct: 655 KKQMVGRESHWIGLTDSERENEWKWLDGTSPDYKN--WKAGQPDNWGHGHGPGEDCAGLI 712

Query: 169 FRKSPKRWGWNDVNCLGPQRSVCE 192
           +        WND  C      +CE
Sbjct: 713 YAGQ-----WNDFQCEDVNNFICE 731


>gi|4502251 asialoglycoprotein receptor 1 [Homo sapiens]
          Length = 291

 Score = 84.0 bits (206), Expect = 8e-17
 Identities = 47/151 (31%), Positives = 70/151 (46%), Gaps = 15/151 (9%)

Query: 49  TLECVKKNMPVEETAWSCCPKNWKSFSSNCYFISTESASWQDSEKDCARMEAHLLVINTQ 108
           +L C    +    +  +CCP NW     +CY+ S    +W D++  C   +AHL+V+ + 
Sbjct: 136 SLSCQMAALQGNGSERTCCPVNWVEHERSCYWFSRSGKAWADADNYCRLEDAHLVVVTSW 195

Query: 109 EEQDFIFQNLQEESAYFVGLSDPEGQRHWQWVDQTPYNESSTFWHPREPSD-------PN 161
           EEQ F+  ++   + + +GL D  G   W+WVD T Y      W P +P D         
Sbjct: 196 EEQKFVQHHIGPVNTW-MGLHDQNGP--WKWVDGTDYETGFKNWRPEQPDDWYGHGLGGG 252

Query: 162 ERCVVLNFRKSPKRWGWNDVNCLGPQRSVCE 192
           E C   +F    +   WND  C  P R VCE
Sbjct: 253 EDCA--HFTDDGR---WNDDVCQRPYRWVCE 278


>gi|223029517 CD209 molecule isoform 8 [Homo sapiens]
          Length = 243

 Score = 79.7 bits (195), Expect = 1e-15
 Identities = 47/153 (30%), Positives = 76/153 (49%), Gaps = 12/153 (7%)

Query: 34  SQLLEKKTTKELVHTTLECVKKNMPVEETAWSCCPKNWKSFSSNCYFISTESASWQDSEK 93
           S + ++++ ++ ++  L  +K  +   E     CP  W  F  NCYF+S    +W DS  
Sbjct: 65  SSISQEQSRQDAIYQNLTQLKAAV---ERLCHPCPWEWTFFQGNCYFMSNSQRNWHDSIT 121

Query: 94  DCARMEAHLLVINTQEEQDFI-FQNLQEESAYFVGLSDPEGQRHWQWVDQTPYNES-STF 151
            C  + A L+VI + EEQ+F+  Q+ +     ++GLSD   +  WQWVD +P   S   +
Sbjct: 122 ACKEVGAQLVVIKSAEEQNFLQLQSSRSNRFTWMGLSDLNQEGTWQWVDGSPLLPSFKQY 181

Query: 152 WHPREPSDPNER-CVVLNFRKSPKRWGWNDVNC 183
           W+  EP++  E  C   +        GWND  C
Sbjct: 182 WNRGEPNNVGEEDCAEFSGN------GWNDDKC 208


>gi|90991712 CD207 antigen, langerin [Homo sapiens]
          Length = 328

 Score = 79.7 bits (195), Expect = 1e-15
 Identities = 42/139 (30%), Positives = 69/139 (49%), Gaps = 8/139 (5%)

Query: 49  TLECVKKNMPVEETAWSCCPKNWKSFSSNCYFISTESASWQDSEKDCARMEAHLLVINTQ 108
           +LE + K +  +        + WK F  N Y+ S    +W  +E+ C    +HL  + ++
Sbjct: 177 SLENMSKLLKRQNDILQVVSQGWKYFKGNFYYFSLIPKTWYSAEQFCVSRNSHLTSVTSE 236

Query: 109 EEQDFIFQNLQEESAYFVGLSDPEGQRHWQWVDQTPYN--ESSTFWHPREPSDP--NERC 164
            EQ+F+++       Y++GL+    +  W WVD TP+N  +S  FW P EP++   NE C
Sbjct: 237 SEQEFLYKT-AGGLIYWIGLTKAGMEGDWSWVDDTPFNKVQSVRFWIPGEPNNAGNNEHC 295

Query: 165 VVLNFRKSPKRWGWNDVNC 183
             +   K+P    WND  C
Sbjct: 296 GNI---KAPSLQAWNDAPC 311


>gi|223029386 CD209 molecule isoform 3 [Homo sapiens]
          Length = 380

 Score = 79.3 bits (194), Expect = 2e-15
 Identities = 43/120 (35%), Positives = 61/120 (50%), Gaps = 9/120 (7%)

Query: 67  CPKNWKSFSSNCYFISTESASWQDSEKDCARMEAHLLVINTQEEQDFI-FQNLQEESAYF 125
           CP  W  F  NCYF+S    +W DS   C  + A L+VI + EEQ+F+  Q+ +     +
Sbjct: 232 CPWEWTFFQGNCYFMSNSQRNWHDSITACKEVGAQLVVIKSAEEQNFLQLQSSRSNRFTW 291

Query: 126 VGLSDPEGQRHWQWVDQTPYNES-STFWHPREPSDPNER-CVVLNFRKSPKRWGWNDVNC 183
           +GLSD   +  WQWVD +P   S   +W+  EP++  E  C   +        GWND  C
Sbjct: 292 MGLSDLNQEGTWQWVDGSPLLPSFKQYWNRGEPNNVGEEDCAEFSGN------GWNDDKC 345


>gi|223029384 CD209 molecule isoform 7 [Homo sapiens]
          Length = 312

 Score = 79.3 bits (194), Expect = 2e-15
 Identities = 43/120 (35%), Positives = 61/120 (50%), Gaps = 9/120 (7%)

Query: 67  CPKNWKSFSSNCYFISTESASWQDSEKDCARMEAHLLVINTQEEQDFI-FQNLQEESAYF 125
           CP  W  F  NCYF+S    +W DS   C  + A L+VI + EEQ+F+  Q+ +     +
Sbjct: 164 CPWEWTFFQGNCYFMSNSQRNWHDSITACKEVGAQLVVIKSAEEQNFLQLQSSRSNRFTW 223

Query: 126 VGLSDPEGQRHWQWVDQTPYNES-STFWHPREPSDPNER-CVVLNFRKSPKRWGWNDVNC 183
           +GLSD   +  WQWVD +P   S   +W+  EP++  E  C   +        GWND  C
Sbjct: 224 MGLSDLNQEGTWQWVDGSPLLPSFKQYWNRGEPNNVGEEDCAEFSGN------GWNDDKC 277


>gi|223029382 CD209 molecule isoform 6 [Homo sapiens]
          Length = 360

 Score = 79.3 bits (194), Expect = 2e-15
 Identities = 43/120 (35%), Positives = 61/120 (50%), Gaps = 9/120 (7%)

Query: 67  CPKNWKSFSSNCYFISTESASWQDSEKDCARMEAHLLVINTQEEQDFI-FQNLQEESAYF 125
           CP  W  F  NCYF+S    +W DS   C  + A L+VI + EEQ+F+  Q+ +     +
Sbjct: 212 CPWEWTFFQGNCYFMSNSQRNWHDSITACKEVGAQLVVIKSAEEQNFLQLQSSRSNRFTW 271

Query: 126 VGLSDPEGQRHWQWVDQTPYNES-STFWHPREPSDPNER-CVVLNFRKSPKRWGWNDVNC 183
           +GLSD   +  WQWVD +P   S   +W+  EP++  E  C   +        GWND  C
Sbjct: 272 MGLSDLNQEGTWQWVDGSPLLPSFKQYWNRGEPNNVGEEDCAEFSGN------GWNDDKC 325


>gi|223029380 CD209 molecule isoform 5 [Homo sapiens]
          Length = 268

 Score = 79.3 bits (194), Expect = 2e-15
 Identities = 43/120 (35%), Positives = 61/120 (50%), Gaps = 9/120 (7%)

Query: 67  CPKNWKSFSSNCYFISTESASWQDSEKDCARMEAHLLVINTQEEQDFI-FQNLQEESAYF 125
           CP  W  F  NCYF+S    +W DS   C  + A L+VI + EEQ+F+  Q+ +     +
Sbjct: 120 CPWEWTFFQGNCYFMSNSQRNWHDSITACKEVGAQLVVIKSAEEQNFLQLQSSRSNRFTW 179

Query: 126 VGLSDPEGQRHWQWVDQTPYNES-STFWHPREPSDPNER-CVVLNFRKSPKRWGWNDVNC 183
           +GLSD   +  WQWVD +P   S   +W+  EP++  E  C   +        GWND  C
Sbjct: 180 MGLSDLNQEGTWQWVDGSPLLPSFKQYWNRGEPNNVGEEDCAEFSGN------GWNDDKC 233


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.316    0.128    0.413 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,121,758
Number of Sequences: 37866
Number of extensions: 366996
Number of successful extensions: 1195
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 120
Number of HSP's successfully gapped in prelim test: 36
Number of HSP's that attempted gapping in prelim test: 921
Number of HSP's gapped (non-prelim): 210
length of query: 198
length of database: 18,247,518
effective HSP length: 97
effective length of query: 101
effective length of database: 14,574,516
effective search space: 1472026116
effective search space used: 1472026116
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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