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Search of human proteins with 145977198
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|145977198 prosaposin-like protein 1 [Homo sapiens]
(521 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|145977198 prosaposin-like protein 1 [Homo sapiens] 1075 0.0
gi|11386147 prosaposin isoform a preproprotein [Homo sapiens] 456 e-128
gi|110224479 prosaposin isoform c preproprotein [Homo sapiens] 451 e-127
gi|110224476 prosaposin isoform b preproprotein [Homo sapiens] 451 e-126
gi|38504667 surfactant, pulmonary-associated protein B [Homo sap... 74 2e-13
gi|33943099 surfactant, pulmonary-associated protein B [Homo sap... 74 2e-13
gi|31657092 ATP binding cassette, sub-family A (ABC1), member 13... 35 0.17
gi|7108344 granulysin isoform NKG5 [Homo sapiens] 34 0.37
gi|157502222 granulysin isoform 519 [Homo sapiens] 34 0.37
gi|122891862 DENN/MADD domain containing 5B [Homo sapiens] 32 1.4
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 30 7.0
gi|42476272 zinc finger protein 513 [Homo sapiens] 30 7.0
>gi|145977198 prosaposin-like protein 1 [Homo sapiens]
Length = 521
Score = 1075 bits (2779), Expect = 0.0
Identities = 521/521 (100%), Positives = 521/521 (100%)
Query: 1 MLCALLLLPSLLGATRASPTSGPQECAKGSTVWCQDLQTAARCGAVGYCQGAVWNKPTAK 60
MLCALLLLPSLLGATRASPTSGPQECAKGSTVWCQDLQTAARCGAVGYCQGAVWNKPTAK
Sbjct: 1 MLCALLLLPSLLGATRASPTSGPQECAKGSTVWCQDLQTAARCGAVGYCQGAVWNKPTAK 60
Query: 61 SLPCDVCQDIAAAAGNGLNPDATESDILALVMKTCEWLPSQESSAGCKWMVDAHSSAILS 120
SLPCDVCQDIAAAAGNGLNPDATESDILALVMKTCEWLPSQESSAGCKWMVDAHSSAILS
Sbjct: 61 SLPCDVCQDIAAAAGNGLNPDATESDILALVMKTCEWLPSQESSAGCKWMVDAHSSAILS 120
Query: 121 MLRGAPDSAPAQVCTALSLCEPLQRHLATLRPLSKEDTFEAVAPFMANGPLTFHPRQAPE 180
MLRGAPDSAPAQVCTALSLCEPLQRHLATLRPLSKEDTFEAVAPFMANGPLTFHPRQAPE
Sbjct: 121 MLRGAPDSAPAQVCTALSLCEPLQRHLATLRPLSKEDTFEAVAPFMANGPLTFHPRQAPE 180
Query: 181 GALCQDCVRQVSRLQEAVRSNLTLADLNIQEQCESLGPGLAVLCKNYLFQFFVPADQALR 240
GALCQDCVRQVSRLQEAVRSNLTLADLNIQEQCESLGPGLAVLCKNYLFQFFVPADQALR
Sbjct: 181 GALCQDCVRQVSRLQEAVRSNLTLADLNIQEQCESLGPGLAVLCKNYLFQFFVPADQALR 240
Query: 241 LLPPQELCRKGGFCEELGAPARLTQVVAMDGVPSLELGLPRKQSEMQMKAGVTCEVCMNV 300
LLPPQELCRKGGFCEELGAPARLTQVVAMDGVPSLELGLPRKQSEMQMKAGVTCEVCMNV
Sbjct: 241 LLPPQELCRKGGFCEELGAPARLTQVVAMDGVPSLELGLPRKQSEMQMKAGVTCEVCMNV 300
Query: 301 VQKLDHWLMSNSSELMITHALERVCSVMPASITKECIILVDTYSPSLVQLVAKITPEKVC 360
VQKLDHWLMSNSSELMITHALERVCSVMPASITKECIILVDTYSPSLVQLVAKITPEKVC
Sbjct: 301 VQKLDHWLMSNSSELMITHALERVCSVMPASITKECIILVDTYSPSLVQLVAKITPEKVC 360
Query: 361 KFIRLCGNRRRARAVHDAYAIVPSPEWDAENQGSFCNGCKRLLTVSSHNLESKSTKRDIL 420
KFIRLCGNRRRARAVHDAYAIVPSPEWDAENQGSFCNGCKRLLTVSSHNLESKSTKRDIL
Sbjct: 361 KFIRLCGNRRRARAVHDAYAIVPSPEWDAENQGSFCNGCKRLLTVSSHNLESKSTKRDIL 420
Query: 421 VAFKGGCSILPLPYMIQCKHFVTQYEPVLIESLKDMMDPVAVCKKVGACHGPRTPLLGTD 480
VAFKGGCSILPLPYMIQCKHFVTQYEPVLIESLKDMMDPVAVCKKVGACHGPRTPLLGTD
Sbjct: 421 VAFKGGCSILPLPYMIQCKHFVTQYEPVLIESLKDMMDPVAVCKKVGACHGPRTPLLGTD 480
Query: 481 QCALGPSFWCRSQEAAKLCNAVQHCQKHVWKEMHLHAGEHA 521
QCALGPSFWCRSQEAAKLCNAVQHCQKHVWKEMHLHAGEHA
Sbjct: 481 QCALGPSFWCRSQEAAKLCNAVQHCQKHVWKEMHLHAGEHA 521
>gi|11386147 prosaposin isoform a preproprotein [Homo sapiens]
Length = 524
Score = 456 bits (1173), Expect = e-128
Identities = 236/532 (44%), Positives = 334/532 (62%), Gaps = 36/532 (6%)
Query: 4 ALLLLPSLLGATRASPTSGPQECAKGSTVWCQDLQTAARCGAVGYCQGAVWNKPTAKSLP 63
AL LL SLLGA A P G +EC +GS VWCQ+++TA+ CGAV +C VWNKPT KSLP
Sbjct: 3 ALFLLASLLGAALAGPVLGLKECTRGSAVWCQNVKTASDCGAVKHCLQTVWNKPTVKSLP 62
Query: 64 CDVCQDIAAAAGNGLNPDATESDILALVMKTCEWLPSQESSAGCKWMVDAHSSAILSMLR 123
CD+C+D+ AAG+ L +ATE +IL + KTC+WLP SA CK +VD++ IL +++
Sbjct: 63 CDICKDVVTAAGDMLKDNATEEEILVYLEKTCDWLPKPNMSASCKEIVDSYLPVILDIIK 122
Query: 124 GAPDSAPAQVCTALSLCEPLQRHLATLR--------PLSKEDTFEAVAPFMANGPLTFHP 175
G S P +VC+AL+LCE LQ+HLA L + + D E VAPFMAN PL +P
Sbjct: 123 GEM-SRPGEVCSALNLCESLQKHLAELNHQKQLESNKIPELDMTEVVAPFMANIPLLLYP 181
Query: 176 RQAPE--------GALCQDCVRQVSRLQEAVRSNLTLADL---NIQEQCESLGPGLAVLC 224
+ P G +CQDC++ V+ +Q AVR+N T +++E+C+ LGPG+A +C
Sbjct: 182 QDGPRSKPQPKDNGDVCQDCIQMVTDIQTAVRTNSTFVQALVEHVKEECDRLGPGMADIC 241
Query: 225 KNYLFQFFVPADQALRLLPPQELCRKGGFCEELGAPARLT----QVVAMDGVPSLELGLP 280
KNY+ Q+ A Q + + P+E+C GFC+E+ T +V + + +P+LEL P
Sbjct: 242 KNYISQYSEIAIQMMMHMQPKEICALVGFCDEVKEMPMQTLVPAKVASKNVIPALELVEP 301
Query: 281 RKQSEMQMKAGVTCEVCMNVVQKLDHWLMSNSSELMITHALERVCSVMPASITKECIILV 340
K+ E+ K+ V CEVC +V+++ + +N +E I A +++CS +P S+++EC +V
Sbjct: 302 IKKHEVPAKSDVYCEVCEFLVKEVTKLIDNNKTEKEILDAFDKMCSKLPKSLSEECQEVV 361
Query: 341 DTYSPSLVQ-LVAKITPEKVCKFIRLC-GNRRRARAVHDAYAIVPSPEWDAENQGSFCNG 398
DTY S++ L+ +++PE VC + LC G R A VH V P+ G FC
Sbjct: 362 DTYGSSILSILLEEVSPELVCSMLHLCSGTRLPALTVH-----VTQPK-----DGGFCEV 411
Query: 399 CKRLLTVSSHNLESKSTKRDILVAFKGGCSILPLPYMIQCKHFVTQYEPVLIESLKDMMD 458
CK+L+ NLE STK++IL A + GCS LP PY QC FV +YEPVLIE L ++MD
Sbjct: 412 CKKLVGYLDRNLEKNSTKQEILAALEKGCSFLPDPYQKQCDQFVAEYEPVLIEILVEVMD 471
Query: 459 PVAVCKKVGACHGPRTPLLGTDQCALGPSFWCRSQEAAKLCNAVQHCQKHVW 510
P VC K+GAC PLLGT++C GPS+WC++ E A CNAV+HC++HVW
Sbjct: 472 PSFVCLKIGACPSAHKPLLGTEKCIWGPSYWCQNTETAAQCNAVEHCKRHVW 523
Score = 45.8 bits (107), Expect = 9e-05
Identities = 17/37 (45%), Positives = 25/37 (67%)
Query: 19 PTSGPQECAKGSTVWCQDLQTAARCGAVGYCQGAVWN 55
P G ++C G + WCQ+ +TAA+C AV +C+ VWN
Sbjct: 488 PLLGTEKCIWGPSYWCQNTETAAQCNAVEHCKRHVWN 524
Score = 42.7 bits (99), Expect = 8e-04
Identities = 15/38 (39%), Positives = 24/38 (63%)
Query: 475 PLLGTDQCALGPSFWCRSQEAAKLCNAVQHCQKHVWKE 512
P+LG +C G + WC++ + A C AV+HC + VW +
Sbjct: 18 PVLGLKECTRGSAVWCQNVKTASDCGAVKHCLQTVWNK 55
>gi|110224479 prosaposin isoform c preproprotein [Homo sapiens]
Length = 526
Score = 451 bits (1160), Expect = e-127
Identities = 236/534 (44%), Positives = 334/534 (62%), Gaps = 38/534 (7%)
Query: 4 ALLLLPSLLGATRASPTSGPQECAKGSTVWCQDLQTAARCGAVGYCQGAVWNKPTAKSLP 63
AL LL SLLGA A P G +EC +GS VWCQ+++TA+ CGAV +C VWNKPT KSLP
Sbjct: 3 ALFLLASLLGAALAGPVLGLKECTRGSAVWCQNVKTASDCGAVKHCLQTVWNKPTVKSLP 62
Query: 64 CDVCQDIAAAAGNGLNPDATESDILALVMKTCEWLPSQESSAGCKWMVDAHSSAILSMLR 123
CD+C+D+ AAG+ L +ATE +IL + KTC+WLP SA CK +VD++ IL +++
Sbjct: 63 CDICKDVVTAAGDMLKDNATEEEILVYLEKTCDWLPKPNMSASCKEIVDSYLPVILDIIK 122
Query: 124 GAPDSAPAQVCTALSLCEPLQRHLATLR--------PLSKEDTFEAVAPFMANGPLTFHP 175
G S P +VC+AL+LCE LQ+HLA L + + D E VAPFMAN PL +P
Sbjct: 123 GEM-SRPGEVCSALNLCESLQKHLAELNHQKQLESNKIPELDMTEVVAPFMANIPLLLYP 181
Query: 176 RQAPE--------GALCQDCVRQVSRLQEAVRSNLTLADL---NIQEQCESLGPGLAVLC 224
+ P G +CQDC++ V+ +Q AVR+N T +++E+C+ LGPG+A +C
Sbjct: 182 QDGPRSKPQPKDNGDVCQDCIQMVTDIQTAVRTNSTFVQALVEHVKEECDRLGPGMADIC 241
Query: 225 KNYLFQFFVPADQALRLLP--PQELCRKGGFCEELGAPARLT----QVVAMDGVPSLELG 278
KNY+ Q+ A Q + + P+E+C GFC+E+ T +V + + +P+LEL
Sbjct: 242 KNYISQYSEIAIQMMMHMDQQPKEICALVGFCDEVKEMPMQTLVPAKVASKNVIPALELV 301
Query: 279 LPRKQSEMQMKAGVTCEVCMNVVQKLDHWLMSNSSELMITHALERVCSVMPASITKECII 338
P K+ E+ K+ V CEVC +V+++ + +N +E I A +++CS +P S+++EC
Sbjct: 302 EPIKKHEVPAKSDVYCEVCEFLVKEVTKLIDNNKTEKEILDAFDKMCSKLPKSLSEECQE 361
Query: 339 LVDTYSPSLVQ-LVAKITPEKVCKFIRLC-GNRRRARAVHDAYAIVPSPEWDAENQGSFC 396
+VDTY S++ L+ +++PE VC + LC G R A VH V P+ G FC
Sbjct: 362 VVDTYGSSILSILLEEVSPELVCSMLHLCSGTRLPALTVH-----VTQPK-----DGGFC 411
Query: 397 NGCKRLLTVSSHNLESKSTKRDILVAFKGGCSILPLPYMIQCKHFVTQYEPVLIESLKDM 456
CK+L+ NLE STK++IL A + GCS LP PY QC FV +YEPVLIE L ++
Sbjct: 412 EVCKKLVGYLDRNLEKNSTKQEILAALEKGCSFLPDPYQKQCDQFVAEYEPVLIEILVEV 471
Query: 457 MDPVAVCKKVGACHGPRTPLLGTDQCALGPSFWCRSQEAAKLCNAVQHCQKHVW 510
MDP VC K+GAC PLLGT++C GPS+WC++ E A CNAV+HC++HVW
Sbjct: 472 MDPSFVCLKIGACPSAHKPLLGTEKCIWGPSYWCQNTETAAQCNAVEHCKRHVW 525
Score = 45.8 bits (107), Expect = 9e-05
Identities = 17/37 (45%), Positives = 25/37 (67%)
Query: 19 PTSGPQECAKGSTVWCQDLQTAARCGAVGYCQGAVWN 55
P G ++C G + WCQ+ +TAA+C AV +C+ VWN
Sbjct: 490 PLLGTEKCIWGPSYWCQNTETAAQCNAVEHCKRHVWN 526
Score = 42.7 bits (99), Expect = 8e-04
Identities = 15/38 (39%), Positives = 24/38 (63%)
Query: 475 PLLGTDQCALGPSFWCRSQEAAKLCNAVQHCQKHVWKE 512
P+LG +C G + WC++ + A C AV+HC + VW +
Sbjct: 18 PVLGLKECTRGSAVWCQNVKTASDCGAVKHCLQTVWNK 55
>gi|110224476 prosaposin isoform b preproprotein [Homo sapiens]
Length = 527
Score = 451 bits (1159), Expect = e-126
Identities = 236/535 (44%), Positives = 334/535 (62%), Gaps = 39/535 (7%)
Query: 4 ALLLLPSLLGATRASPTSGPQECAKGSTVWCQDLQTAARCGAVGYCQGAVWNKPTAKSLP 63
AL LL SLLGA A P G +EC +GS VWCQ+++TA+ CGAV +C VWNKPT KSLP
Sbjct: 3 ALFLLASLLGAALAGPVLGLKECTRGSAVWCQNVKTASDCGAVKHCLQTVWNKPTVKSLP 62
Query: 64 CDVCQDIAAAAGNGLNPDATESDILALVMKTCEWLPSQESSAGCKWMVDAHSSAILSMLR 123
CD+C+D+ AAG+ L +ATE +IL + KTC+WLP SA CK +VD++ IL +++
Sbjct: 63 CDICKDVVTAAGDMLKDNATEEEILVYLEKTCDWLPKPNMSASCKEIVDSYLPVILDIIK 122
Query: 124 GAPDSAPAQVCTALSLCEPLQRHLATLR--------PLSKEDTFEAVAPFMANGPLTFHP 175
G S P +VC+AL+LCE LQ+HLA L + + D E VAPFMAN PL +P
Sbjct: 123 GEM-SRPGEVCSALNLCESLQKHLAELNHQKQLESNKIPELDMTEVVAPFMANIPLLLYP 181
Query: 176 RQAPE--------GALCQDCVRQVSRLQEAVRSNLTLADL---NIQEQCESLGPGLAVLC 224
+ P G +CQDC++ V+ +Q AVR+N T +++E+C+ LGPG+A +C
Sbjct: 182 QDGPRSKPQPKDNGDVCQDCIQMVTDIQTAVRTNSTFVQALVEHVKEECDRLGPGMADIC 241
Query: 225 KNYLFQFFVPADQALRLLP---PQELCRKGGFCEELGAPARLT----QVVAMDGVPSLEL 277
KNY+ Q+ A Q + + P+E+C GFC+E+ T +V + + +P+LEL
Sbjct: 242 KNYISQYSEIAIQMMMHMQDQQPKEICALVGFCDEVKEMPMQTLVPAKVASKNVIPALEL 301
Query: 278 GLPRKQSEMQMKAGVTCEVCMNVVQKLDHWLMSNSSELMITHALERVCSVMPASITKECI 337
P K+ E+ K+ V CEVC +V+++ + +N +E I A +++CS +P S+++EC
Sbjct: 302 VEPIKKHEVPAKSDVYCEVCEFLVKEVTKLIDNNKTEKEILDAFDKMCSKLPKSLSEECQ 361
Query: 338 ILVDTYSPSLVQ-LVAKITPEKVCKFIRLC-GNRRRARAVHDAYAIVPSPEWDAENQGSF 395
+VDTY S++ L+ +++PE VC + LC G R A VH V P+ G F
Sbjct: 362 EVVDTYGSSILSILLEEVSPELVCSMLHLCSGTRLPALTVH-----VTQPK-----DGGF 411
Query: 396 CNGCKRLLTVSSHNLESKSTKRDILVAFKGGCSILPLPYMIQCKHFVTQYEPVLIESLKD 455
C CK+L+ NLE STK++IL A + GCS LP PY QC FV +YEPVLIE L +
Sbjct: 412 CEVCKKLVGYLDRNLEKNSTKQEILAALEKGCSFLPDPYQKQCDQFVAEYEPVLIEILVE 471
Query: 456 MMDPVAVCKKVGACHGPRTPLLGTDQCALGPSFWCRSQEAAKLCNAVQHCQKHVW 510
+MDP VC K+GAC PLLGT++C GPS+WC++ E A CNAV+HC++HVW
Sbjct: 472 VMDPSFVCLKIGACPSAHKPLLGTEKCIWGPSYWCQNTETAAQCNAVEHCKRHVW 526
Score = 45.8 bits (107), Expect = 9e-05
Identities = 17/37 (45%), Positives = 25/37 (67%)
Query: 19 PTSGPQECAKGSTVWCQDLQTAARCGAVGYCQGAVWN 55
P G ++C G + WCQ+ +TAA+C AV +C+ VWN
Sbjct: 491 PLLGTEKCIWGPSYWCQNTETAAQCNAVEHCKRHVWN 527
Score = 42.7 bits (99), Expect = 8e-04
Identities = 15/38 (39%), Positives = 24/38 (63%)
Query: 475 PLLGTDQCALGPSFWCRSQEAAKLCNAVQHCQKHVWKE 512
P+LG +C G + WC++ + A C AV+HC + VW +
Sbjct: 18 PVLGLKECTRGSAVWCQNVKTASDCGAVKHCLQTVWNK 55
>gi|38504667 surfactant, pulmonary-associated protein B [Homo
sapiens]
Length = 381
Score = 74.3 bits (181), Expect = 2e-13
Identities = 91/385 (23%), Positives = 152/385 (39%), Gaps = 50/385 (12%)
Query: 5 LLLLPSLLGATRASPTSGPQECAKGSTVWCQDLQTAARCGAVGYCQGAVWNKPTAKSLPC 64
LLLLP+L G A+ T+ CA+G WCQ L+ A +C A+G+C VW A L C
Sbjct: 11 LLLLPTLCGPGTAAWTTSSLACAQGPEFWCQSLEQALQCRALGHCLQEVWGHVGADDL-C 69
Query: 65 DVCQDIAAAAGNGLNPDATESDILALVMKTCEWLPSQESSAGCKWMVDAHSSAILSMLRG 124
C+DI + + + + C LP + C ++D + ++ +
Sbjct: 70 QECEDIVHILNKMAKEAIFQDTMRKFLEQECNVLPLKLLMPQCNQVLDDYFPLVIDYFQN 129
Query: 125 APDSAPAQVCTALSLCEPLQRHLATLRPLSKEDTFEAVAPFMANGPLTFHPRQAPEGALC 184
DS +C L LC+ Q P +++ P M++ PL R L
Sbjct: 130 QTDS--NGICMHLGLCKSRQ-------PEPEQE------PGMSD-PLPKPLRDPLPDPLL 173
Query: 185 QDCVRQVSRLQEAVRSNLTLADLNIQEQCESLGPGLAVLCKNYLFQFFVPADQALRLLPP 244
V V L A+++ ++ EQ + LC+ + + + +
Sbjct: 174 DKLVLPV--LPGALQARPGPHTQDLSEQQFPIPLPYCWLCRALIKRIQAMIPKGALAVAV 231
Query: 245 QELCR-----KGGFCEELGAPARLTQVVAMDG-----VPSLELGL-----------PRKQ 283
++CR GG C+ L A V+ +D +P L L PR
Sbjct: 232 AQVCRVVPLVAGGICQCL---AERYSVILLDTLLGRMLPQLVCRLVLRCSMDDSAGPRSP 288
Query: 284 SEMQMKAGVTCEVCMNVVQKLDHWLMSNSSELMITHALERVCSVMPASITKECIILVDTY 343
+ + C +CM+V + NSSE I A+ + C V ++C V+ +
Sbjct: 289 TGEWLPRDSECHLCMSVTTQ-----AGNSSEQAIPQAMLQAC-VGSWLDREKCKQFVEQH 342
Query: 344 SPSLVQLVAK-ITPEKVCKFIRLCG 367
+P L+ LV + C+ + +CG
Sbjct: 343 TPQLLTLVPRGWDAHTTCQALGVCG 367
Score = 45.8 bits (107), Expect = 9e-05
Identities = 45/194 (23%), Positives = 83/194 (42%), Gaps = 23/194 (11%)
Query: 294 CEVCMNVVQKLDHWLMSNSSELMITHALERVCSVMPASITKECIILVDTYSPSLVQ-LVA 352
C +C +++++ + + + A+ +VC V+P C L + YS L+ L+
Sbjct: 208 CWLCRALIKRIQAMIPKGA----LAVAVAQVCRVVPLVAGGICQCLAERYSVILLDTLLG 263
Query: 353 KITPEKVCKFIRLCGNRRRARAVHDAYAIVPSPEWDAENQGSFCNGCKRLLTVSSHNLES 412
++ P+ VC+ + C D A SP + + S C+ C + T + ++ E
Sbjct: 264 RMLPQLVCRLVLRCSM--------DDSAGPRSPTGEWLPRDSECHLCMSVTTQAGNSSE- 314
Query: 413 KSTKRDILVAFKGGCSILPLPYMIQCKHFVTQYEPVLIESLKDMMDPVAVCKKVGACHGP 472
++ + +L A G +CK FV Q+ P L+ + D C+ +G C
Sbjct: 315 QAIPQAMLQACVGSWLDRE-----KCKQFVEQHTPQLLTLVPRGWDAHTTCQALGVCGTM 369
Query: 473 RTPLLGTDQCALGP 486
+PL QC P
Sbjct: 370 SSPL----QCIHSP 379
Score = 43.9 bits (102), Expect = 4e-04
Identities = 20/42 (47%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Query: 471 GPRTPLLGTDQ--CALGPSFWCRSQEAAKLCNAVQHCQKHVW 510
GP T T CA GP FWC+S E A C A+ HC + VW
Sbjct: 19 GPGTAAWTTSSLACAQGPEFWCQSLEQALQCRALGHCLQEVW 60
Score = 35.0 bits (79), Expect = 0.17
Identities = 16/84 (19%), Positives = 37/84 (44%), Gaps = 1/84 (1%)
Query: 387 WDAENQGSFCNGCKRLLTVSSHNLESKSTKRDILVAFKGGCSILPLPYMI-QCKHFVTQY 445
W C C+ ++ + + + + + + C++LPL ++ QC + Y
Sbjct: 60 WGHVGADDLCQECEDIVHILNKMAKEAIFQDTMRKFLEQECNVLPLKLLMPQCNQVLDDY 119
Query: 446 EPVLIESLKDMMDPVAVCKKVGAC 469
P++I+ ++ D +C +G C
Sbjct: 120 FPLVIDYFQNQTDSNGICMHLGLC 143
>gi|33943099 surfactant, pulmonary-associated protein B [Homo
sapiens]
Length = 381
Score = 74.3 bits (181), Expect = 2e-13
Identities = 91/385 (23%), Positives = 152/385 (39%), Gaps = 50/385 (12%)
Query: 5 LLLLPSLLGATRASPTSGPQECAKGSTVWCQDLQTAARCGAVGYCQGAVWNKPTAKSLPC 64
LLLLP+L G A+ T+ CA+G WCQ L+ A +C A+G+C VW A L C
Sbjct: 11 LLLLPTLCGPGTAAWTTSSLACAQGPEFWCQSLEQALQCRALGHCLQEVWGHVGADDL-C 69
Query: 65 DVCQDIAAAAGNGLNPDATESDILALVMKTCEWLPSQESSAGCKWMVDAHSSAILSMLRG 124
C+DI + + + + C LP + C ++D + ++ +
Sbjct: 70 QECEDIVHILNKMAKEAIFQDTMRKFLEQECNVLPLKLLMPQCNQVLDDYFPLVIDYFQN 129
Query: 125 APDSAPAQVCTALSLCEPLQRHLATLRPLSKEDTFEAVAPFMANGPLTFHPRQAPEGALC 184
DS +C L LC+ Q P +++ P M++ PL R L
Sbjct: 130 QTDS--NGICMHLGLCKSRQ-------PEPEQE------PGMSD-PLPKPLRDPLPDPLL 173
Query: 185 QDCVRQVSRLQEAVRSNLTLADLNIQEQCESLGPGLAVLCKNYLFQFFVPADQALRLLPP 244
V V L A+++ ++ EQ + LC+ + + + +
Sbjct: 174 DKLVLPV--LPGALQARPGPHTQDLSEQQFPIPLPYCWLCRALIKRIQAMIPKGALAVAV 231
Query: 245 QELCR-----KGGFCEELGAPARLTQVVAMDG-----VPSLELGL-----------PRKQ 283
++CR GG C+ L A V+ +D +P L L PR
Sbjct: 232 AQVCRVVPLVAGGICQCL---AERYSVILLDTLLGRMLPQLVCRLVLRCSMDDSAGPRSP 288
Query: 284 SEMQMKAGVTCEVCMNVVQKLDHWLMSNSSELMITHALERVCSVMPASITKECIILVDTY 343
+ + C +CM+V + NSSE I A+ + C V ++C V+ +
Sbjct: 289 TGEWLPRDSECHLCMSVTTQ-----AGNSSEQAIPQAMLQAC-VGSWLDREKCKQFVEQH 342
Query: 344 SPSLVQLVAK-ITPEKVCKFIRLCG 367
+P L+ LV + C+ + +CG
Sbjct: 343 TPQLLTLVPRGWDAHTTCQALGVCG 367
Score = 45.8 bits (107), Expect = 9e-05
Identities = 45/194 (23%), Positives = 83/194 (42%), Gaps = 23/194 (11%)
Query: 294 CEVCMNVVQKLDHWLMSNSSELMITHALERVCSVMPASITKECIILVDTYSPSLVQ-LVA 352
C +C +++++ + + + A+ +VC V+P C L + YS L+ L+
Sbjct: 208 CWLCRALIKRIQAMIPKGA----LAVAVAQVCRVVPLVAGGICQCLAERYSVILLDTLLG 263
Query: 353 KITPEKVCKFIRLCGNRRRARAVHDAYAIVPSPEWDAENQGSFCNGCKRLLTVSSHNLES 412
++ P+ VC+ + C D A SP + + S C+ C + T + ++ E
Sbjct: 264 RMLPQLVCRLVLRCSM--------DDSAGPRSPTGEWLPRDSECHLCMSVTTQAGNSSE- 314
Query: 413 KSTKRDILVAFKGGCSILPLPYMIQCKHFVTQYEPVLIESLKDMMDPVAVCKKVGACHGP 472
++ + +L A G +CK FV Q+ P L+ + D C+ +G C
Sbjct: 315 QAIPQAMLQACVGSWLDRE-----KCKQFVEQHTPQLLTLVPRGWDAHTTCQALGVCGTM 369
Query: 473 RTPLLGTDQCALGP 486
+PL QC P
Sbjct: 370 SSPL----QCIHSP 379
Score = 43.9 bits (102), Expect = 4e-04
Identities = 20/42 (47%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Query: 471 GPRTPLLGTDQ--CALGPSFWCRSQEAAKLCNAVQHCQKHVW 510
GP T T CA GP FWC+S E A C A+ HC + VW
Sbjct: 19 GPGTAAWTTSSLACAQGPEFWCQSLEQALQCRALGHCLQEVW 60
Score = 35.0 bits (79), Expect = 0.17
Identities = 16/84 (19%), Positives = 37/84 (44%), Gaps = 1/84 (1%)
Query: 387 WDAENQGSFCNGCKRLLTVSSHNLESKSTKRDILVAFKGGCSILPLPYMI-QCKHFVTQY 445
W C C+ ++ + + + + + + C++LPL ++ QC + Y
Sbjct: 60 WGHVGADDLCQECEDIVHILNKMAKEAIFQDTMRKFLEQECNVLPLKLLMPQCNQVLDDY 119
Query: 446 EPVLIESLKDMMDPVAVCKKVGAC 469
P++I+ ++ D +C +G C
Sbjct: 120 FPLVIDYFQNQTDSNGICMHLGLC 143
>gi|31657092 ATP binding cassette, sub-family A (ABC1), member 13
[Homo sapiens]
Length = 5058
Score = 35.0 bits (79), Expect = 0.17
Identities = 26/103 (25%), Positives = 53/103 (51%), Gaps = 11/103 (10%)
Query: 116 SAILSMLRGAPDSAPAQVCTALSLCEPLQRHLATLRPLSKEDTFEAVAP---FMANGPLT 172
S+ L + + ++A Q CT+ E +Q+HL L S E+T+ + P F++N +T
Sbjct: 3007 SSTLESFKSSLENATGQDCTSQPRLETVQQHLYMLAK-SLEETWSSGNPIMTFLSNFTVT 3065
Query: 173 FHPRQAPEGALCQDCVRQVSRLQEAVRSNLTLADLNIQEQCES 215
E +D ++ +++L E +RS++ +++ I E+
Sbjct: 3066 -------EDVKIKDLMKNITKLTEELRSSIQISNETIHSILEA 3101
>gi|7108344 granulysin isoform NKG5 [Homo sapiens]
Length = 145
Score = 33.9 bits (76), Expect = 0.37
Identities = 20/71 (28%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 297 CMNVVQKLDHWLMSNSSELMITHALERVCSVMPASITKECIILVDTYSPSLVQ-LVAKIT 355
C+ +VQKL ++ ++ +++A RVC + C + Y + Q LVA T
Sbjct: 69 CLTIVQKLKK-MVDKPTQRSVSNAATRVCRTGRSRWRDVCRNFMRRYQSRVTQGLVAGET 127
Query: 356 PEKVCKFIRLC 366
+++C+ +RLC
Sbjct: 128 AQQICEDLRLC 138
>gi|157502222 granulysin isoform 519 [Homo sapiens]
Length = 130
Score = 33.9 bits (76), Expect = 0.37
Identities = 20/71 (28%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 297 CMNVVQKLDHWLMSNSSELMITHALERVCSVMPASITKECIILVDTYSPSLVQ-LVAKIT 355
C+ +VQKL ++ ++ +++A RVC + C + Y + Q LVA T
Sbjct: 54 CLTIVQKLKK-MVDKPTQRSVSNAATRVCRTGRSRWRDVCRNFMRRYQSRVTQGLVAGET 112
Query: 356 PEKVCKFIRLC 366
+++C+ +RLC
Sbjct: 113 AQQICEDLRLC 123
>gi|122891862 DENN/MADD domain containing 5B [Homo sapiens]
Length = 1274
Score = 32.0 bits (71), Expect = 1.4
Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Query: 402 LLTVSSHNLESKSTKRDILVAFKGGCSILPLPYMIQCKHFVTQ 444
LL + +N S RD L K C I PLP+M CK F+ Q
Sbjct: 170 LLKLQRYN--SYDISRDTLYVSKSICLITPLPFMQACKKFLIQ 210
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 29.6 bits (65), Expect = 7.0
Identities = 22/59 (37%), Positives = 27/59 (45%), Gaps = 4/59 (6%)
Query: 126 PDSAPAQVCTALSLCEPLQRHLA-TLRPLSKEDTFEAVAPFMANGPLTFHPRQAPEGAL 183
PDS P Q +L PLQ L+ + PLS T + P A L H QAP +L
Sbjct: 452 PDSPPLQAPLSLPASPPLQTSLSPAVSPLSSPLT---IHPLQALSSLASHSPQAPLSSL 507
>gi|42476272 zinc finger protein 513 [Homo sapiens]
Length = 541
Score = 29.6 bits (65), Expect = 7.0
Identities = 17/53 (32%), Positives = 22/53 (41%), Gaps = 2/53 (3%)
Query: 469 CHGP--RTPLLGTDQCALGPSFWCRSQEAAKLCNAVQHCQKHVWKEMHLHAGE 519
C GP P G GP R + +LC V H H+ + M H+GE
Sbjct: 123 CGGPTGEGPCCGAGGPGGGPLLPPRLLYSCRLCTFVSHYSSHLKRHMQTHSGE 175
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.133 0.424
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,102,045
Number of Sequences: 37866
Number of extensions: 1025863
Number of successful extensions: 2302
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 2215
Number of HSP's gapped (non-prelim): 25
length of query: 521
length of database: 18,247,518
effective HSP length: 107
effective length of query: 414
effective length of database: 14,195,856
effective search space: 5877084384
effective search space used: 5877084384
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.