Guide to the Human Genome
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Name: MLC1 Sequence: fasta or formatted (377aa) NCBI GI: 14589896
Description:

megalencephalic leukoencephalopathy with subcortical cysts 1 gene product

Referenced in:

Additional Brain Proteins

Other entries for this name:
alt mRNA [377aa] megalencephalic leukoencephalopathy with subcortical cysts 1 gene...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.8         37           2
 C cysteine            2.9         11           1
 D aspartate           3.7         14           2
 E glutamate           4.5         17           2
 F phenylalanine       5.3         20           2
 G glycine             4.5         17           2
 H histidine           0.8          3           1
 I isoleucine          6.1         23           2
 K lysine              4.2         16           4
 L leucine            13.0         49           7
 M methionine          2.4          9           1
 N asparagine          3.2         12           1
 P proline             5.8         22           2
 Q glutamine           2.9         11           1
 R arginine            4.2         16           2
 S serine             10.1         38           2
 T threonine           4.2         16           3
 V valine              8.8         33           3
 W tryptophan          1.3          5           1
 Y tyrosine            2.1          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   megalencephalic leukoencephalopathy with subcortical... 
MLC1                  1.000   megalencephalic leukoencephalopathy with subcortical...
KCNA1                 0.017   potassium voltage-gated channel subfamily A member ...
GRM7                  0.007   glutamate receptor, metabotropic 7 isoform b precurs...
GRM7                  0.007   glutamate receptor, metabotropic 7 isoform a precurso...
EPHB3                 0.007   ephrin receptor EphB3 precursor 
KCNA3                 0.007   potassium voltage-gated channel, shaker-related subf...
TNFSF18               0.007   tumor necrosis factor (ligand) superfamily, member ...
LOC100294376          0.006   PREDICTED: similar to hCG16318 
TXK                   0.006   TXK tyrosine kinase 
GPSN2                 0.006   glycoprotein, synaptic 2 
KCNA2                 0.006   potassium voltage-gated channel, shaker-related subfa...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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