Search of human proteins with 14211845

Search of human proteins with 14211845

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|14211845 IMP2 inner mitochondrial membrane protease-like
[Homo sapiens]
         (175 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|14211845 IMP2 inner mitochondrial membrane protease-like [Hom...   365   e-101
gi|21450679 IMP1 inner mitochondrial membrane peptidase-like [Ho...    84   6e-17
gi|154800453 tastin isoform 1 [Homo sapiens]                           29   1.8  
gi|169214175 PREDICTED: hypothetical protein [Homo sapiens]            27   6.9  
gi|169213636 PREDICTED: hypothetical protein [Homo sapiens]            27   6.9  
gi|28373126 contactin 4 isoform c precursor [Homo sapiens]             27   6.9  
gi|28373122 contactin 4 isoform a precursor [Homo sapiens]             27   6.9  

>gi|14211845 IMP2 inner mitochondrial membrane protease-like [Homo
           sapiens]
          Length = 175

 Score =  365 bits (936), Expect = e-101
 Identities = 175/175 (100%), Positives = 175/175 (100%)

Query: 1   MAQSQGWVKRYIKAFCKGFFVAVPVAVTFLDRVACVARVEGASMQPSLNPGGSQSSDVVL 60
           MAQSQGWVKRYIKAFCKGFFVAVPVAVTFLDRVACVARVEGASMQPSLNPGGSQSSDVVL
Sbjct: 1   MAQSQGWVKRYIKAFCKGFFVAVPVAVTFLDRVACVARVEGASMQPSLNPGGSQSSDVVL 60

Query: 61  LNHWKVRNFEVHRGDIVSLVSPKNPEQKIIKRVIALEGDIVRTIGHKNRYVKVPRGHIWV 120
           LNHWKVRNFEVHRGDIVSLVSPKNPEQKIIKRVIALEGDIVRTIGHKNRYVKVPRGHIWV
Sbjct: 61  LNHWKVRNFEVHRGDIVSLVSPKNPEQKIIKRVIALEGDIVRTIGHKNRYVKVPRGHIWV 120

Query: 121 EGDHHGHSFDSNSFGPVSLGLLHAHATHILWPPERWQKLESVLPPERLPVQREEE 175
           EGDHHGHSFDSNSFGPVSLGLLHAHATHILWPPERWQKLESVLPPERLPVQREEE
Sbjct: 121 EGDHHGHSFDSNSFGPVSLGLLHAHATHILWPPERWQKLESVLPPERLPVQREEE 175


>gi|21450679 IMP1 inner mitochondrial membrane peptidase-like [Homo
           sapiens]
          Length = 166

 Score = 84.0 bits (206), Expect = 6e-17
 Identities = 46/131 (35%), Positives = 69/131 (52%), Gaps = 8/131 (6%)

Query: 25  VAVTFLDRVACVARVEGASMQPSLNPGGSQSSDVVLLNHWKVRNFEVHRGDIVSLVSPKN 84
           +A    + V  V    G SM+P++     Q+SD+V   +     + + RGDIV   SP +
Sbjct: 22  IAHCAFEYVGGVVMCSGPSMEPTI-----QNSDIVFAENLSRHFYGIQRGDIVIAKSPSD 76

Query: 85  PEQKIIKRVIALEGDIVRTIGHKNRYVK---VPRGHIWVEGDHHGHSFDSNSFGPVSLGL 141
           P+  I KRVI LEGD + T    + +     VP GH+W+EGD+  +S DS  +GP+  GL
Sbjct: 77  PKSNICKRVIGLEGDKILTTSPSDFFKSHSYVPMGHVWLEGDNLQNSTDSRCYGPIPYGL 136

Query: 142 LHAHATHILWP 152
           +       +WP
Sbjct: 137 IRGRIFFKIWP 147


>gi|154800453 tastin isoform 1 [Homo sapiens]
          Length = 778

 Score = 29.3 bits (64), Expect = 1.8
 Identities = 13/47 (27%), Positives = 22/47 (46%)

Query: 25  VAVTFLDRVACVARVEGASMQPSLNPGGSQSSDVVLLNHWKVRNFEV 71
           VAV   D+ +C+  +EG+   P   P G  S+    L   K++   +
Sbjct: 391 VAVRLFDQESCIRSLEGSGKPPVATPSGPHSNRTPSLQEVKIQRIGI 437


>gi|169214175 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 73

 Score = 27.3 bits (59), Expect = 6.9
 Identities = 13/26 (50%), Positives = 18/26 (69%), Gaps = 2/26 (7%)

Query: 150 LWPPERWQKLESVLPPERLPVQREEE 175
           LWPPE+ Q++E     ERL  +REE+
Sbjct: 41  LWPPEKLQEIEEF--KERLRKRREEK 64


>gi|169213636 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 73

 Score = 27.3 bits (59), Expect = 6.9
 Identities = 13/26 (50%), Positives = 18/26 (69%), Gaps = 2/26 (7%)

Query: 150 LWPPERWQKLESVLPPERLPVQREEE 175
           LWPPE+ Q++E     ERL  +REE+
Sbjct: 41  LWPPEKLQEIEEF--KERLRKRREEK 64


>gi|28373126 contactin 4 isoform c precursor [Homo sapiens]
          Length = 698

 Score = 27.3 bits (59), Expect = 6.9
 Identities = 13/49 (26%), Positives = 22/49 (44%)

Query: 40  EGASMQPSLNPGGSQSSDVVLLNHWKVRNFEVHRGDIVSLVSPKNPEQK 88
           +  S  P L  G + ++ VV LN W    F     +++ +  P  P +K
Sbjct: 315 QAVSTVPELIDGKTFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEK 363


>gi|28373122 contactin 4 isoform a precursor [Homo sapiens]
          Length = 1026

 Score = 27.3 bits (59), Expect = 6.9
 Identities = 13/49 (26%), Positives = 22/49 (44%)

Query: 40  EGASMQPSLNPGGSQSSDVVLLNHWKVRNFEVHRGDIVSLVSPKNPEQK 88
           +  S  P L  G + ++ VV LN W    F     +++ +  P  P +K
Sbjct: 643 QAVSTVPELIDGKTFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEK 691


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.321    0.137    0.435 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,675,320
Number of Sequences: 37866
Number of extensions: 337538
Number of successful extensions: 626
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 618
Number of HSP's gapped (non-prelim): 7
length of query: 175
length of database: 18,247,518
effective HSP length: 95
effective length of query: 80
effective length of database: 14,650,248
effective search space: 1172019840
effective search space used: 1172019840
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.