Guide to the Human Genome
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Name: RPS15A Sequence: fasta or formatted (130aa) NCBI GI: 14165469
Description:

ribosomal protein S15a

Referenced in:

Ribosomes

Other entries for this name:
alt mRNA [130aa] ribosomal protein S15a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.6          6           1
 C cysteine            1.5          2           1
 D aspartate           4.6          6           2
 E glutamate           4.6          6           2
 F phenylalanine       6.2          8           3
 G glycine             8.5         11           2
 H histidine           3.1          4           1
 I isoleucine          8.5         11           2
 K lysine              8.5         11           1
 L leucine             9.2         12           2
 M methionine          3.8          5           2
 N asparagine          5.4          7           2
 P proline             2.3          3           1
 Q glutamine           3.1          4           1
 R arginine            8.5         11           2
 S serine              3.8          5           1
 T threonine           3.8          5           2
 V valine              8.5         11           2
 W tryptophan          0.8          1           1
 Y tyrosine            0.8          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ribosomal protein S15a 
RPS15A                1.000   ribosomal protein S15a 
LOC100293274          0.756   PREDICTED: similar to hCG1994130 
LOC100290882          0.756   PREDICTED: hypothetical protein XP_002347835 
LOC100288781          0.756   PREDICTED: hypothetical protein XP_002343613 
LOC100291884          0.244   PREDICTED: similar to hCG1644591 
LOC100291442          0.244   PREDICTED: hypothetical protein XP_002347582 
LOC100286942          0.239   PREDICTED: hypothetical protein XP_002343414 
C11orf9               0.008   hypothetical protein LOC745 isoform 1 
C11orf9               0.008   hypothetical protein LOC745 isoform 2 
SUCLA2                0.008   succinate-CoA ligase, ADP-forming, beta subunit prec...
KMO                   0.008   kynurenine 3-monooxygenase 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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