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Search of human proteins with 9966849
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|9966849 TP53-induced glycolysis and apoptosis regulator
[Homo sapiens]
(270 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|9966849 TP53-induced glycolysis and apoptosis regulator [Homo... 538 e-153
gi|50593010 bisphosphoglycerate mutase 2 [Homo sapiens] 42 6e-04
gi|4502445 bisphosphoglycerate mutase [Homo sapiens] 41 0.001
gi|40353764 bisphosphoglycerate mutase [Homo sapiens] 41 0.001
gi|4505753 bisphosphoglycerate mutase 1 [Homo sapiens] 39 0.006
gi|71274132 bisphosphoglycerate mutase 4 [Homo sapiens] 33 0.34
gi|49640014 ubiquitin associated and SH3 domain containing, A sh... 31 1.3
gi|9507221 ubiquitin associated and SH3 domain containing, A lon... 31 1.3
gi|58535453 CDK5 regulatory subunit associated protein 2 isoform... 30 2.9
gi|58535451 CDK5 regulatory subunit associated protein 2 isoform... 30 2.9
>gi|9966849 TP53-induced glycolysis and apoptosis regulator [Homo
sapiens]
Length = 270
Score = 538 bits (1387), Expect = e-153
Identities = 270/270 (100%), Positives = 270/270 (100%)
Query: 1 MARFALTVVRHGETRFNKEKIIQGQGVDEPLSETGFKQAAAAGIFLNNVKFTHAFSSDLM 60
MARFALTVVRHGETRFNKEKIIQGQGVDEPLSETGFKQAAAAGIFLNNVKFTHAFSSDLM
Sbjct: 1 MARFALTVVRHGETRFNKEKIIQGQGVDEPLSETGFKQAAAAGIFLNNVKFTHAFSSDLM 60
Query: 61 RTKQTMHGILERSKFCKDMTVKYDSRLRERKYGVVEGKALSELRAMAKAAREECPVFTPP 120
RTKQTMHGILERSKFCKDMTVKYDSRLRERKYGVVEGKALSELRAMAKAAREECPVFTPP
Sbjct: 61 RTKQTMHGILERSKFCKDMTVKYDSRLRERKYGVVEGKALSELRAMAKAAREECPVFTPP 120
Query: 121 GGETLDQVKMRGIDFFEFLCQLILKEADQKEQFSQGSPSNCLETSLAEIFPLGKNHSSKV 180
GGETLDQVKMRGIDFFEFLCQLILKEADQKEQFSQGSPSNCLETSLAEIFPLGKNHSSKV
Sbjct: 121 GGETLDQVKMRGIDFFEFLCQLILKEADQKEQFSQGSPSNCLETSLAEIFPLGKNHSSKV 180
Query: 181 NSDSGIPGLAASVLVVSHGAYMRSLFDYFLTDLKCSLPATLSRSELMSVTPNTGMSLFII 240
NSDSGIPGLAASVLVVSHGAYMRSLFDYFLTDLKCSLPATLSRSELMSVTPNTGMSLFII
Sbjct: 181 NSDSGIPGLAASVLVVSHGAYMRSLFDYFLTDLKCSLPATLSRSELMSVTPNTGMSLFII 240
Query: 241 NFEEGREVKPTVQCICMNLQDHLNGLTETR 270
NFEEGREVKPTVQCICMNLQDHLNGLTETR
Sbjct: 241 NFEEGREVKPTVQCICMNLQDHLNGLTETR 270
>gi|50593010 bisphosphoglycerate mutase 2 [Homo sapiens]
Length = 253
Score = 42.0 bits (97), Expect = 6e-04
Identities = 37/119 (31%), Positives = 58/119 (48%), Gaps = 6/119 (5%)
Query: 1 MARFALTVVRHGETRFNKEKIIQGQGVDEPLSETGFKQAAAAGIFLNNVK--FTHAFSSD 58
MA L +VRHGE+ +N+E G D LSE G ++A + + K F ++S
Sbjct: 1 MATHRLVMVRHGESTWNQENRFCG-WFDAELSEKGTEEAKRGAKAIKDAKMEFDICYTSV 59
Query: 59 LMRTKQTMHGILERSKFCKDMTVKYDSRLRERKYGVVEGKALSELRAMAKAAREECPVF 117
L R +T+ IL+ + + V RL ER YG + G L++ AK E+ ++
Sbjct: 60 LKRAIRTLWAILDGTDQMW-LPVVRTWRLNERHYGGLTG--LNKAETAAKHGEEQVKIW 115
>gi|4502445 bisphosphoglycerate mutase [Homo sapiens]
Length = 259
Score = 41.2 bits (95), Expect = 0.001
Identities = 40/127 (31%), Positives = 59/127 (46%), Gaps = 9/127 (7%)
Query: 1 MARFALTVVRHGETRFNKEKIIQGQGVDEPLSETGFKQAAAAGIFLN--NVKFTHAFSSD 58
M+++ L ++RHGE +NKE VD+ L+ G ++A G L N +F F+S
Sbjct: 1 MSKYKLIMLRHGEGAWNKENRF-CSWVDQKLNSEGMEEARNCGKQLKALNFEFDLVFTSV 59
Query: 59 LMRTKQTMHGILERSKFCKDMTVKYDSRLRERKYGVV-----EGKALSELRAMAKAAREE 113
L R+ T ILE + + V+ RL ER YG + E AL+ + R
Sbjct: 60 LNRSIHTAWLILEELG-QEWVPVESSWRLNERHYGALIGLNREQMALNHGEEQVRLWRRS 118
Query: 114 CPVFTPP 120
V PP
Sbjct: 119 YNVTPPP 125
>gi|40353764 bisphosphoglycerate mutase [Homo sapiens]
Length = 259
Score = 41.2 bits (95), Expect = 0.001
Identities = 40/127 (31%), Positives = 59/127 (46%), Gaps = 9/127 (7%)
Query: 1 MARFALTVVRHGETRFNKEKIIQGQGVDEPLSETGFKQAAAAGIFLN--NVKFTHAFSSD 58
M+++ L ++RHGE +NKE VD+ L+ G ++A G L N +F F+S
Sbjct: 1 MSKYKLIMLRHGEGAWNKENRF-CSWVDQKLNSEGMEEARNCGKQLKALNFEFDLVFTSV 59
Query: 59 LMRTKQTMHGILERSKFCKDMTVKYDSRLRERKYGVV-----EGKALSELRAMAKAAREE 113
L R+ T ILE + + V+ RL ER YG + E AL+ + R
Sbjct: 60 LNRSIHTAWLILEELG-QEWVPVESSWRLNERHYGALIGLNREQMALNHGEEQVRLWRRS 118
Query: 114 CPVFTPP 120
V PP
Sbjct: 119 YNVTPPP 125
>gi|4505753 bisphosphoglycerate mutase 1 [Homo sapiens]
Length = 254
Score = 38.5 bits (88), Expect = 0.006
Identities = 38/127 (29%), Positives = 55/127 (43%), Gaps = 9/127 (7%)
Query: 1 MARFALTVVRHGETRFNKEKIIQGQGVDEPLSETGFKQAAAAGIFLNNV--KFTHAFSSD 58
MA + L ++RHGE+ +N E G D LS G ++A G L + +F F+S
Sbjct: 1 MAAYKLVLIRHGESAWNLENRFSG-WYDADLSPAGHEEAKRGGQALRDAGYEFDICFTSV 59
Query: 59 LMRTKQTMHGILERSKFCKDMTVKYDSRLRERKYGVVEGKALSEL-----RAMAKAAREE 113
R +T+ +L+ + V RL ER YG + G +E A K R
Sbjct: 60 QKRAIRTLWTVLDAIDQMW-LPVVRTWRLNERHYGGLTGLNKAETAAKHGEAQVKIWRRS 118
Query: 114 CPVFTPP 120
V PP
Sbjct: 119 YDVPPPP 125
>gi|71274132 bisphosphoglycerate mutase 4 [Homo sapiens]
Length = 254
Score = 32.7 bits (73), Expect = 0.34
Identities = 36/127 (28%), Positives = 53/127 (41%), Gaps = 9/127 (7%)
Query: 1 MARFALTVVRHGETRFNKEKIIQGQGVDEPLSETGFKQAAAAGIFLNNV--KFTHAFSSD 58
MA + L ++RHGE+ +N E D LS G ++A G L + +F +S
Sbjct: 1 MAAYKLVLIRHGESTWNLENRF-SCWYDADLSPAGHEEAKRGGQALRDAGYEFDICLTSV 59
Query: 59 LMRTKQTMHGILERSKFCKDMTVKYDSRLRERKYGVVEGKALSEL-----RAMAKAAREE 113
R +T+ +L+ + V RL ER YG + G +E A K R
Sbjct: 60 QKRVIRTLWTVLDAIDQMW-LPVVRTWRLNERHYGGLTGLNKAETAAKHGEAQVKIWRRS 118
Query: 114 CPVFTPP 120
V PP
Sbjct: 119 YDVPPPP 125
>gi|49640014 ubiquitin associated and SH3 domain containing, A short
form [Homo sapiens]
Length = 623
Score = 30.8 bits (68), Expect = 1.3
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 28 DEPLSETGFKQAAAAGIFL--NNVKFTHAFSSDLMRTKQTMHGILERSKFCKDMTVKYDS 85
D PLS G Q+ AG L + ++ + F+S +R QT ILE K K + ++ +
Sbjct: 412 DPPLSSCGIFQSRIAGDALLDSGIRISSVFASPALRCVQTAKLILEELKLEKKIKIRVEP 471
Query: 86 RLRE 89
+ E
Sbjct: 472 GIFE 475
>gi|9507221 ubiquitin associated and SH3 domain containing, A long
form [Homo sapiens]
Length = 661
Score = 30.8 bits (68), Expect = 1.3
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 28 DEPLSETGFKQAAAAGIFL--NNVKFTHAFSSDLMRTKQTMHGILERSKFCKDMTVKYDS 85
D PLS G Q+ AG L + ++ + F+S +R QT ILE K K + ++ +
Sbjct: 450 DPPLSSCGIFQSRIAGDALLDSGIRISSVFASPALRCVQTAKLILEELKLEKKIKIRVEP 509
Query: 86 RLRE 89
+ E
Sbjct: 510 GIFE 513
>gi|58535453 CDK5 regulatory subunit associated protein 2 isoform b
[Homo sapiens]
Length = 1814
Score = 29.6 bits (65), Expect = 2.9
Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 4/75 (5%)
Query: 112 EECPVFTPPGGETLDQVKMRGIDFFEFLCQLILKEAD----QKEQFSQGSPSNCLETSLA 167
E+C PPG +T+ + + +E L Q++ KE D + + N L+ L
Sbjct: 526 EKCSSQQPPGSKTIFSKEKKQSSDYEELIQVLKKEQDIYTHLVKSLQESDSINNLQAELN 585
Query: 168 EIFPLGKNHSSKVNS 182
+IF L K V S
Sbjct: 586 KIFALRKQLEQDVLS 600
>gi|58535451 CDK5 regulatory subunit associated protein 2 isoform a
[Homo sapiens]
Length = 1893
Score = 29.6 bits (65), Expect = 2.9
Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 4/75 (5%)
Query: 112 EECPVFTPPGGETLDQVKMRGIDFFEFLCQLILKEAD----QKEQFSQGSPSNCLETSLA 167
E+C PPG +T+ + + +E L Q++ KE D + + N L+ L
Sbjct: 526 EKCSSQQPPGSKTIFSKEKKQSSDYEELIQVLKKEQDIYTHLVKSLQESDSINNLQAELN 585
Query: 168 EIFPLGKNHSSKVNS 182
+IF L K V S
Sbjct: 586 KIFALRKQLEQDVLS 600
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.134 0.385
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,657,759
Number of Sequences: 37866
Number of extensions: 393090
Number of successful extensions: 892
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 891
Number of HSP's gapped (non-prelim): 10
length of query: 270
length of database: 18,247,518
effective HSP length: 101
effective length of query: 169
effective length of database: 14,423,052
effective search space: 2437495788
effective search space used: 2437495788
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.