Search of human proteins with 98961141

Search of human proteins with 98961141

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|98961141 transmembrane protein 168 [Homo sapiens]
         (697 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|98961141 transmembrane protein 168 [Homo sapiens]                 1429   0.0  
gi|51100978 tweety 3 [Homo sapiens]                                    34   0.40 
gi|68299767 arylacetamide deacetylase [Homo sapiens]                   32   2.6  
gi|194248077 Kruppel-like factor 4 (gut) [Homo sapiens]                31   4.4  
gi|52353354 olfactory receptor, family 8, subfamily G, member 5 ...    30   5.8  
gi|126362955 sodium channel, voltage-gated, type III, alpha isof...    30   9.9  
gi|126362947 sodium channel, voltage-gated, type III, alpha isof...    30   9.9  
gi|126362949 sodium channel, voltage-gated, type III, alpha isof...    30   9.9  

>gi|98961141 transmembrane protein 168 [Homo sapiens]
          Length = 697

 Score = 1429 bits (3698), Expect = 0.0
 Identities = 697/697 (100%), Positives = 697/697 (100%)

Query: 1   MCKSLRYCFSHCLYLAMTRLEEVNREVNMHSSVRYLGYLARINLLVAICLGLYVRWEKTA 60
           MCKSLRYCFSHCLYLAMTRLEEVNREVNMHSSVRYLGYLARINLLVAICLGLYVRWEKTA
Sbjct: 1   MCKSLRYCFSHCLYLAMTRLEEVNREVNMHSSVRYLGYLARINLLVAICLGLYVRWEKTA 60

Query: 61  NSLILVIFILGLFVLGIASILYYYFSMEAASLSLSNLWFGFLLGLLCFLDNSSFKNDVKE 120
           NSLILVIFILGLFVLGIASILYYYFSMEAASLSLSNLWFGFLLGLLCFLDNSSFKNDVKE
Sbjct: 61  NSLILVIFILGLFVLGIASILYYYFSMEAASLSLSNLWFGFLLGLLCFLDNSSFKNDVKE 120

Query: 121 ESTKYLLLTSIVLRILCSLVERISGYVRHRPTLLTTVEFLELVGFAIASTTMLVEKSLSV 180
           ESTKYLLLTSIVLRILCSLVERISGYVRHRPTLLTTVEFLELVGFAIASTTMLVEKSLSV
Sbjct: 121 ESTKYLLLTSIVLRILCSLVERISGYVRHRPTLLTTVEFLELVGFAIASTTMLVEKSLSV 180

Query: 181 ILLVVALAMLIIDLRMKSFLAIPNLVIFAVLLFFSSLETPKNPIAFACFFICLITDPFLD 240
           ILLVVALAMLIIDLRMKSFLAIPNLVIFAVLLFFSSLETPKNPIAFACFFICLITDPFLD
Sbjct: 181 ILLVVALAMLIIDLRMKSFLAIPNLVIFAVLLFFSSLETPKNPIAFACFFICLITDPFLD 240

Query: 241 IYFSGLSVTERWKPFLYRGRICRRLSVVFAGMIELTFFILSAFKLRDTHLWYFVIPGFSI 300
           IYFSGLSVTERWKPFLYRGRICRRLSVVFAGMIELTFFILSAFKLRDTHLWYFVIPGFSI
Sbjct: 241 IYFSGLSVTERWKPFLYRGRICRRLSVVFAGMIELTFFILSAFKLRDTHLWYFVIPGFSI 300

Query: 301 FGIFWMICHIIFLLTLWGFHTKLNDCHKVYFTHRTDYNSLDRIMASKGMRHFCLISEQLV 360
           FGIFWMICHIIFLLTLWGFHTKLNDCHKVYFTHRTDYNSLDRIMASKGMRHFCLISEQLV
Sbjct: 301 FGIFWMICHIIFLLTLWGFHTKLNDCHKVYFTHRTDYNSLDRIMASKGMRHFCLISEQLV 360

Query: 361 FFSLLATAILGAVSWQPTNGIFLSMFLIVLPLESMAHGLFHELGNCLGGTSVGYAIVIPT 420
           FFSLLATAILGAVSWQPTNGIFLSMFLIVLPLESMAHGLFHELGNCLGGTSVGYAIVIPT
Sbjct: 361 FFSLLATAILGAVSWQPTNGIFLSMFLIVLPLESMAHGLFHELGNCLGGTSVGYAIVIPT 420

Query: 421 NFCSPDGQPTLLPPEHVQELNLRSTGMLNAIQRFFAYHMIETYGCDYSTSGLSFDTLHSK 480
           NFCSPDGQPTLLPPEHVQELNLRSTGMLNAIQRFFAYHMIETYGCDYSTSGLSFDTLHSK
Sbjct: 421 NFCSPDGQPTLLPPEHVQELNLRSTGMLNAIQRFFAYHMIETYGCDYSTSGLSFDTLHSK 480

Query: 481 LKAFLELRTVDGPRHDTYILYYSGHTHGTGEWALAGGDTLRLDTLIEWWREKNGSFCSRL 540
           LKAFLELRTVDGPRHDTYILYYSGHTHGTGEWALAGGDTLRLDTLIEWWREKNGSFCSRL
Sbjct: 481 LKAFLELRTVDGPRHDTYILYYSGHTHGTGEWALAGGDTLRLDTLIEWWREKNGSFCSRL 540

Query: 541 IIVLDSENSTPWVKEVRKINDQYIAVQGAELIKTVDIEEADPPQLGDFTKDWVEYNCNSS 600
           IIVLDSENSTPWVKEVRKINDQYIAVQGAELIKTVDIEEADPPQLGDFTKDWVEYNCNSS
Sbjct: 541 IIVLDSENSTPWVKEVRKINDQYIAVQGAELIKTVDIEEADPPQLGDFTKDWVEYNCNSS 600

Query: 601 NNICWTEKGRTVKAVYGVSKRWSDYTLHLPTGSDVAKHWMLHFPRITYPLVHLANWLCGL 660
           NNICWTEKGRTVKAVYGVSKRWSDYTLHLPTGSDVAKHWMLHFPRITYPLVHLANWLCGL
Sbjct: 601 NNICWTEKGRTVKAVYGVSKRWSDYTLHLPTGSDVAKHWMLHFPRITYPLVHLANWLCGL 660

Query: 661 NLFWICKTCFRCLKRLKMSWFLPTVLDTGQGFKLVKS 697
           NLFWICKTCFRCLKRLKMSWFLPTVLDTGQGFKLVKS
Sbjct: 661 NLFWICKTCFRCLKRLKMSWFLPTVLDTGQGFKLVKS 697


>gi|51100978 tweety 3 [Homo sapiens]
          Length = 523

 Score = 34.3 bits (77), Expect = 0.40
 Identities = 18/59 (30%), Positives = 36/59 (61%)

Query: 20  LEEVNREVNMHSSVRYLGYLARINLLVAICLGLYVRWEKTANSLILVIFILGLFVLGIA 78
           LE +  +V+++   R+LGYL  + L V ICL + V   +++  +++ + +LG+  L I+
Sbjct: 195 LEVLAEQVDLYDWYRWLGYLGLLLLDVIICLLVLVGLIRSSKGILVGVCLLGVLALVIS 253


>gi|68299767 arylacetamide deacetylase [Homo sapiens]
          Length = 399

 Score = 31.6 bits (70), Expect = 2.6
 Identities = 31/130 (23%), Positives = 56/130 (43%), Gaps = 25/130 (19%)

Query: 379 NGIFLSMFLIVLPLESMAHGLF--HELGNCLGGTSV-GY------------AIVIPTNFC 423
           N I + +++     E++  GLF  H  G C+G  ++ GY            A+V+ TN+ 
Sbjct: 87  NNILVRVYVPKRKSEALRRGLFYIHGGGWCVGSAALSGYDLLSRWTADRLDAVVVSTNY- 145

Query: 424 SPDGQPTLLPPEHVQELNLRSTGMLNAIQRFFAYHMIETYGCDYSTSGLSFDTLHSKLKA 483
                  L P  H     ++   + NA++ F    ++  YG +    G+S D+    L A
Sbjct: 146 ------RLAPKYHFP---IQFEDVYNALRWFLRKKVLAKYGVNPERIGISGDSAGGNLAA 196

Query: 484 FLELRTVDGP 493
            +  + +D P
Sbjct: 197 AVTQQLLDDP 206


>gi|194248077 Kruppel-like factor 4 (gut) [Homo sapiens]
          Length = 479

 Score = 30.8 bits (68), Expect = 4.4
 Identities = 31/115 (26%), Positives = 43/115 (37%), Gaps = 20/115 (17%)

Query: 425 PDGQPTLLPPEHVQELNLRSTGMLNAI-----QRFFAYHMIETYGCDYSTSGLSFDTLHS 479
           PD     +PP H QEL    + M         +R +      T+ CDY+  G ++ T  S
Sbjct: 353 PDQMQPQVPPLHYQELMPPGSCMPEEPKPKRGRRSWPRKRTATHTCDYAGCGKTY-TKSS 411

Query: 480 KLKAFLELRTVDGPRHDTYILYYSGHTHGTGEWALAGGDTLRLDTLIEWWREKNG 534
            LKA L   T + P H               +W   G    R D L   +R+  G
Sbjct: 412 HLKAHLRTHTGEKPYH--------------CDWDGCGWKFARSDELTRHYRKHTG 452


>gi|52353354 olfactory receptor, family 8, subfamily G, member 5
           [Homo sapiens]
          Length = 346

 Score = 30.4 bits (67), Expect = 5.8
 Identities = 30/123 (24%), Positives = 62/123 (50%), Gaps = 15/123 (12%)

Query: 26  EVNMHSSVRYLGYLARIN-LLVAICLGLYVRWEKTANSLILVIFILGLFVLGIASILYYY 84
           E +M +++ Y GY+A  + LL +I +       K   SLILV++++GL  +  ++ +   
Sbjct: 146 ECHMLAAMAYDGYVAICSPLLYSIIIS-----NKACFSLILVVYVIGL--ICASAHIGCM 198

Query: 85  FSMEAASLSLSNLWFGFLLGLLCFLDNSSFKNDVKEESTKYLLLTSIVLRILCSLVERIS 144
           F ++     + N +F  L+ +L    +S++ N++       L+L    + IL   +  +S
Sbjct: 199 FRVQFCKFDVINHYFCDLISILKLSCSSTYINEL-------LILIFSGINILVPSLTILS 251

Query: 145 GYV 147
            Y+
Sbjct: 252 SYI 254


>gi|126362955 sodium channel, voltage-gated, type III, alpha isoform 3
            [Homo sapiens]
          Length = 1951

 Score = 29.6 bits (65), Expect = 9.9
 Identities = 14/58 (24%), Positives = 30/58 (51%), Gaps = 12/58 (20%)

Query: 42   INLLVAICLGLYVRWEKTAN------------SLILVIFILGLFVLGIASILYYYFSM 87
            I++++ ICL +     +T +            +L+ ++   G FVL + S+ +YYF++
Sbjct: 1481 ISIMILICLNMVTMMVETDDQGKYMTLVLSRINLVFIVLFTGEFVLKLVSLRHYYFTI 1538


>gi|126362947 sodium channel, voltage-gated, type III, alpha isoform 2
            [Homo sapiens]
          Length = 1951

 Score = 29.6 bits (65), Expect = 9.9
 Identities = 14/58 (24%), Positives = 30/58 (51%), Gaps = 12/58 (20%)

Query: 42   INLLVAICLGLYVRWEKTAN------------SLILVIFILGLFVLGIASILYYYFSM 87
            I++++ ICL +     +T +            +L+ ++   G FVL + S+ +YYF++
Sbjct: 1481 ISIMILICLNMVTMMVETDDQGKYMTLVLSRINLVFIVLFTGEFVLKLVSLRHYYFTI 1538


>gi|126362949 sodium channel, voltage-gated, type III, alpha isoform 1
            [Homo sapiens]
          Length = 2000

 Score = 29.6 bits (65), Expect = 9.9
 Identities = 14/58 (24%), Positives = 30/58 (51%), Gaps = 12/58 (20%)

Query: 42   INLLVAICLGLYVRWEKTAN------------SLILVIFILGLFVLGIASILYYYFSM 87
            I++++ ICL +     +T +            +L+ ++   G FVL + S+ +YYF++
Sbjct: 1530 ISIMILICLNMVTMMVETDDQGKYMTLVLSRINLVFIVLFTGEFVLKLVSLRHYYFTI 1587


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.329    0.142    0.458 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,416,907
Number of Sequences: 37866
Number of extensions: 1084637
Number of successful extensions: 2926
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 2922
Number of HSP's gapped (non-prelim): 8
length of query: 697
length of database: 18,247,518
effective HSP length: 109
effective length of query: 588
effective length of database: 14,120,124
effective search space: 8302632912
effective search space used: 8302632912
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.