Guide to the Human Genome
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Search of human proteins with 94721246

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|94721246 placental alkaline phosphatase preproprotein [Homo
sapiens]
         (535 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|94721246 placental alkaline phosphatase preproprotein [Homo s...  1075   0.0  
gi|157266296 placental-like alkaline phosphatase preproprotein [...  1026   0.0  
gi|157266292 intestinal alkaline phosphatase precursor [Homo sap...   918   0.0  
gi|116734717 tissue-nonspecific alkaline phosphatase precursor [...   548   e-156
gi|188595718 tissue-nonspecific alkaline phosphatase precursor [...   548   e-156
gi|66346693 FAT tumor suppressor 1 precursor [Homo sapiens]            33   0.85 
gi|16933557 dachsous 1 precursor [Homo sapiens]                        30   4.2  

>gi|94721246 placental alkaline phosphatase preproprotein [Homo
           sapiens]
          Length = 535

 Score = 1075 bits (2780), Expect = 0.0
 Identities = 535/535 (100%), Positives = 535/535 (100%)

Query: 1   MLGPCMLLLLLLLGLRLQLSLGIIPVEEENPDFWNREAAEALGAAKKLQPAQTAAKNLII 60
           MLGPCMLLLLLLLGLRLQLSLGIIPVEEENPDFWNREAAEALGAAKKLQPAQTAAKNLII
Sbjct: 1   MLGPCMLLLLLLLGLRLQLSLGIIPVEEENPDFWNREAAEALGAAKKLQPAQTAAKNLII 60

Query: 61  FLGDGMGVSTVTAARILKGQKKDKLGPEIPLAMDRFPYVALSKTYNVDKHVPDSGATATA 120
           FLGDGMGVSTVTAARILKGQKKDKLGPEIPLAMDRFPYVALSKTYNVDKHVPDSGATATA
Sbjct: 61  FLGDGMGVSTVTAARILKGQKKDKLGPEIPLAMDRFPYVALSKTYNVDKHVPDSGATATA 120

Query: 121 YLCGVKGNFQTIGLSAAARFNQCNTTRGNEVISVMNRAKKAGKSVGVVTTTRVQHASPAG 180
           YLCGVKGNFQTIGLSAAARFNQCNTTRGNEVISVMNRAKKAGKSVGVVTTTRVQHASPAG
Sbjct: 121 YLCGVKGNFQTIGLSAAARFNQCNTTRGNEVISVMNRAKKAGKSVGVVTTTRVQHASPAG 180

Query: 181 TYAHTVNRNWYSDADVPASARQEGCQDIATQLISNMDIDVILGGGRKYMFRMGTPDPEYP 240
           TYAHTVNRNWYSDADVPASARQEGCQDIATQLISNMDIDVILGGGRKYMFRMGTPDPEYP
Sbjct: 181 TYAHTVNRNWYSDADVPASARQEGCQDIATQLISNMDIDVILGGGRKYMFRMGTPDPEYP 240

Query: 241 DDYSQGGTRLDGKNLVQEWLAKRQGARYVWNRTELMQASLDPSVTHLMGLFEPGDMKYEI 300
           DDYSQGGTRLDGKNLVQEWLAKRQGARYVWNRTELMQASLDPSVTHLMGLFEPGDMKYEI
Sbjct: 241 DDYSQGGTRLDGKNLVQEWLAKRQGARYVWNRTELMQASLDPSVTHLMGLFEPGDMKYEI 300

Query: 301 HRDSTLDPSLMEMTEAALRLLSRNPRGFFLFVEGGRIDHGHHESRAYRALTETIMFDDAI 360
           HRDSTLDPSLMEMTEAALRLLSRNPRGFFLFVEGGRIDHGHHESRAYRALTETIMFDDAI
Sbjct: 301 HRDSTLDPSLMEMTEAALRLLSRNPRGFFLFVEGGRIDHGHHESRAYRALTETIMFDDAI 360

Query: 361 ERAGQLTSEEDTLSLVTADHSHVFSFGGYPLRGSSIFGLAPGKARDRKAYTVLLYGNGPG 420
           ERAGQLTSEEDTLSLVTADHSHVFSFGGYPLRGSSIFGLAPGKARDRKAYTVLLYGNGPG
Sbjct: 361 ERAGQLTSEEDTLSLVTADHSHVFSFGGYPLRGSSIFGLAPGKARDRKAYTVLLYGNGPG 420

Query: 421 YVLKDGARPDVTESESGSPEYRQQSAVPLDEETHAGEDVAVFARGPQAHLVHGVQEQTFI 480
           YVLKDGARPDVTESESGSPEYRQQSAVPLDEETHAGEDVAVFARGPQAHLVHGVQEQTFI
Sbjct: 421 YVLKDGARPDVTESESGSPEYRQQSAVPLDEETHAGEDVAVFARGPQAHLVHGVQEQTFI 480

Query: 481 AHVMAFAACLEPYTACDLAPPAGTTDAAHPGRSVVPALLPLLAGTLLLLETATAP 535
           AHVMAFAACLEPYTACDLAPPAGTTDAAHPGRSVVPALLPLLAGTLLLLETATAP
Sbjct: 481 AHVMAFAACLEPYTACDLAPPAGTTDAAHPGRSVVPALLPLLAGTLLLLETATAP 535


>gi|157266296 placental-like alkaline phosphatase preproprotein
           [Homo sapiens]
          Length = 532

 Score = 1026 bits (2652), Expect = 0.0
 Identities = 513/527 (97%), Positives = 517/527 (98%)

Query: 9   LLLLLGLRLQLSLGIIPVEEENPDFWNREAAEALGAAKKLQPAQTAAKNLIIFLGDGMGV 68
           +LLLLGLRLQLSLGIIPVEEENPDFWNR+AAEALGAAKKLQPAQTAAKNLIIFLGDGMGV
Sbjct: 6   VLLLLGLRLQLSLGIIPVEEENPDFWNRQAAEALGAAKKLQPAQTAAKNLIIFLGDGMGV 65

Query: 69  STVTAARILKGQKKDKLGPEIPLAMDRFPYVALSKTYNVDKHVPDSGATATAYLCGVKGN 128
           STVTAARILKGQKKDKLGPE  LAMDRFPYVALSKTY+VDKHVPDSGATATAYLCGVKGN
Sbjct: 66  STVTAARILKGQKKDKLGPETFLAMDRFPYVALSKTYSVDKHVPDSGATATAYLCGVKGN 125

Query: 129 FQTIGLSAAARFNQCNTTRGNEVISVMNRAKKAGKSVGVVTTTRVQHASPAGTYAHTVNR 188
           FQTIGLSAAARFNQCNTTRGNEVISVMNRAKKAGKSVGVVTTTRVQHASPAG YAHTVNR
Sbjct: 126 FQTIGLSAAARFNQCNTTRGNEVISVMNRAKKAGKSVGVVTTTRVQHASPAGAYAHTVNR 185

Query: 189 NWYSDADVPASARQEGCQDIATQLISNMDIDVILGGGRKYMFRMGTPDPEYPDDYSQGGT 248
           NWYSDADVPASARQEGCQDIATQLISNMDIDVILGGGRKYMF MGTPDPEYPDDYSQGGT
Sbjct: 186 NWYSDADVPASARQEGCQDIATQLISNMDIDVILGGGRKYMFPMGTPDPEYPDDYSQGGT 245

Query: 249 RLDGKNLVQEWLAKRQGARYVWNRTELMQASLDPSVTHLMGLFEPGDMKYEIHRDSTLDP 308
           RLDGKNLVQEWLAK QGARYVWNRTEL+QASLDPSVTHLMGLFEPGDMKYEIHRDSTLDP
Sbjct: 246 RLDGKNLVQEWLAKHQGARYVWNRTELLQASLDPSVTHLMGLFEPGDMKYEIHRDSTLDP 305

Query: 309 SLMEMTEAALRLLSRNPRGFFLFVEGGRIDHGHHESRAYRALTETIMFDDAIERAGQLTS 368
           SLMEMTEAAL LLSRNPRGFFLFVEGGRIDHGHHESRAYRALTETIMFDDAIERAGQLTS
Sbjct: 306 SLMEMTEAALLLLSRNPRGFFLFVEGGRIDHGHHESRAYRALTETIMFDDAIERAGQLTS 365

Query: 369 EEDTLSLVTADHSHVFSFGGYPLRGSSIFGLAPGKARDRKAYTVLLYGNGPGYVLKDGAR 428
           EEDTLSLVTADHSHVFSFGGYPLRGSSIFGLAPGKARDRKAYTVLLYGNGPGYVLKDGAR
Sbjct: 366 EEDTLSLVTADHSHVFSFGGYPLRGSSIFGLAPGKARDRKAYTVLLYGNGPGYVLKDGAR 425

Query: 429 PDVTESESGSPEYRQQSAVPLDEETHAGEDVAVFARGPQAHLVHGVQEQTFIAHVMAFAA 488
           PDVTESESGSPEYRQQSAVPLD ETHAGEDVAVFARGPQAHLVHGVQEQTFIAHVMAFAA
Sbjct: 426 PDVTESESGSPEYRQQSAVPLDGETHAGEDVAVFARGPQAHLVHGVQEQTFIAHVMAFAA 485

Query: 489 CLEPYTACDLAPPAGTTDAAHPGRSVVPALLPLLAGTLLLLETATAP 535
           CLEPYTACDLAP AGTTDAAHPG SVVPALLPLLAGTLLLL TATAP
Sbjct: 486 CLEPYTACDLAPRAGTTDAAHPGPSVVPALLPLLAGTLLLLGTATAP 532


>gi|157266292 intestinal alkaline phosphatase precursor [Homo
           sapiens]
          Length = 528

 Score =  918 bits (2372), Expect = 0.0
 Identities = 457/527 (86%), Positives = 478/527 (90%), Gaps = 4/527 (0%)

Query: 9   LLLLLGLRLQLSLGIIPVEEENPDFWNREAAEALGAAKKLQPAQTAAKNLIIFLGDGMGV 68
           +LLLLGLRLQLSLG+IP EEENP FWNR+AAEAL AAKKLQP Q  AKNLI+FLGDG+GV
Sbjct: 6   VLLLLGLRLQLSLGVIPAEEENPAFWNRQAAEALDAAKKLQPIQKVAKNLILFLGDGLGV 65

Query: 69  STVTAARILKGQKKDKLGPEIPLAMDRFPYVALSKTYNVDKHVPDSGATATAYLCGVKGN 128
            TVTA RILKGQK  KLGPE PLAMDRFPY+ALSKTYNVD+ VPDS ATATAYLCGVK N
Sbjct: 66  PTVTATRILKGQKNGKLGPETPLAMDRFPYLALSKTYNVDRQVPDSAATATAYLCGVKAN 125

Query: 129 FQTIGLSAAARFNQCNTTRGNEVISVMNRAKKAGKSVGVVTTTRVQHASPAGTYAHTVNR 188
           FQTIGLSAAARFNQCNTTRGNEVISVMNRAK+AGKSVGVVTTTRVQHASPAGTYAHTVNR
Sbjct: 126 FQTIGLSAAARFNQCNTTRGNEVISVMNRAKQAGKSVGVVTTTRVQHASPAGTYAHTVNR 185

Query: 189 NWYSDADVPASARQEGCQDIATQLISNMDIDVILGGGRKYMFRMGTPDPEYPDDYSQGGT 248
           NWYSDAD+PASARQEGCQDIATQLISNMDIDVILGGGRKYMF MGTPDPEYP D SQ G 
Sbjct: 186 NWYSDADMPASARQEGCQDIATQLISNMDIDVILGGGRKYMFPMGTPDPEYPADASQNGI 245

Query: 249 RLDGKNLVQEWLAKRQGARYVWNRTELMQASLDPSVTHLMGLFEPGDMKYEIHRDSTLDP 308
           RLDGKNLVQEWLAK QGA YVWNRTELMQASLD SVTHLMGLFEPGD KYEIHRD TLDP
Sbjct: 246 RLDGKNLVQEWLAKHQGAWYVWNRTELMQASLDQSVTHLMGLFEPGDTKYEIHRDPTLDP 305

Query: 309 SLMEMTEAALRLLSRNPRGFFLFVEGGRIDHGHHESRAYRALTETIMFDDAIERAGQLTS 368
           SLMEMTEAALRLLSRNPRGF+LFVEGGRIDHGHHE  AY+ALTE +MFDDAIERAGQLTS
Sbjct: 306 SLMEMTEAALRLLSRNPRGFYLFVEGGRIDHGHHEGVAYQALTEAVMFDDAIERAGQLTS 365

Query: 369 EEDTLSLVTADHSHVFSFGGYPLRGSSIFGLAPGKARDRKAYTVLLYGNGPGYVLKDGAR 428
           EEDTL+LVTADHSHVFSFGGY LRGSSIFGLAP KA+D KAYT +LYGNGPGYV   G R
Sbjct: 366 EEDTLTLVTADHSHVFSFGGYTLRGSSIFGLAPSKAQDSKAYTSILYGNGPGYVFNSGVR 425

Query: 429 PDVTESESGSPEYRQQSAVPLDEETHAGEDVAVFARGPQAHLVHGVQEQTFIAHVMAFAA 488
           PDV ESESGSP+Y+QQ+AVPL  ETH GEDVAVFARGPQAHLVHGVQEQ+F+AHVMAFAA
Sbjct: 426 PDVNESESGSPDYQQQAAVPLSSETHGGEDVAVFARGPQAHLVHGVQEQSFVAHVMAFAA 485

Query: 489 CLEPYTACDLAPPAGTTDAAHPGRSVVPALLPLLAGTLLLLETATAP 535
           CLEPYTACDLAPPA TTDAAHP    V A LPLLAGTLLLL  + AP
Sbjct: 486 CLEPYTACDLAPPACTTDAAHP----VAASLPLLAGTLLLLGASAAP 528


>gi|116734717 tissue-nonspecific alkaline phosphatase precursor
           [Homo sapiens]
          Length = 524

 Score =  548 bits (1412), Expect = e-156
 Identities = 277/492 (56%), Positives = 361/492 (73%), Gaps = 9/492 (1%)

Query: 6   MLLLLLLLGLRLQLSLGIIPVEEENPDFWNREAAEALGAAKKLQPAQT-AAKNLIIFLGD 64
           M+   L+L +   L+  ++P +E++P +W  +A E L  A +LQ   T  AKN+I+FLGD
Sbjct: 1   MISPFLVLAIGTCLTNSLVPEKEKDPKYWRDQAQETLKYALELQKLNTNVAKNVIMFLGD 60

Query: 65  GMGVSTVTAARILKGQKKDKLGPEIPLAMDRFPYVALSKTYNVDKHVPDSGATATAYLCG 124
           GMGVSTVTAARILKGQ     G E  L MD+FP+VALSKTYN +  VPDS  TATAYLCG
Sbjct: 61  GMGVSTVTAARILKGQLHHNPGEETRLEMDKFPFVALSKTYNTNAQVPDSAGTATAYLCG 120

Query: 125 VKGNFQTIGLSAAARFNQCNTTRGNEVISVMNRAKKAGKSVGVVTTTRVQHASPAGTYAH 184
           VK N  T+G+SAA   ++CNTT+GNEV S++  AK AGKSVG+VTTTRV HA+P+  YAH
Sbjct: 121 VKANEGTVGVSAATERSRCNTTQGNEVTSILRWAKDAGKSVGIVTTTRVNHATPSAAYAH 180

Query: 185 TVNRNWYSDADVPASARQEGCQDIATQLISNM-DIDVILGGGRKYMFRMGTPDPEYPDDY 243
           + +R+WYSD ++P  A  +GC+DIA QL+ N+ DIDVI+GGGRKYM+     D EY  D 
Sbjct: 181 SADRDWYSDNEMPPEALSQGCKDIAYQLMHNIRDIDVIMGGGRKYMYPKNKTDVEYESDE 240

Query: 244 SQGGTRLDGKNLVQEWLA---KRQGARYVWNRTELMQASLDP-SVTHLMGLFEPGDMKYE 299
              GTRLDG +LV  W +   + + + ++WNRTEL+  +LDP +V +L+GLFEPGDM+YE
Sbjct: 241 KARGTRLDGLDLVDTWKSFKPRYKHSHFIWNRTELL--TLDPHNVDYLLGLFEPGDMQYE 298

Query: 300 IHRDSTLDPSLMEMTEAALRLLSRNPRGFFLFVEGGRIDHGHHESRAYRALTETIMFDDA 359
           ++R++  DPSL EM   A+++L +NP+GFFL VEGGRIDHGHHE +A +AL E +  D A
Sbjct: 299 LNRNNVTDPSLSEMVVVAIQILRKNPKGFFLLVEGGRIDHGHHEGKAKQALHEAVEMDRA 358

Query: 360 IERAGQLTSEEDTLSLVTADHSHVFSFGGYPLRGSSIFGLAPGKA-RDRKAYTVLLYGNG 418
           I +AG LTS EDTL++VTADHSHVF+FGGY  RG+SIFGLAP  +  D+K +T +LYGNG
Sbjct: 359 IGQAGSLTSSEDTLTVVTADHSHVFTFGGYTPRGNSIFGLAPMLSDTDKKPFTAILYGNG 418

Query: 419 PGYVLKDGARPDVTESESGSPEYRQQSAVPLDEETHAGEDVAVFARGPQAHLVHGVQEQT 478
           PGY +  G R +V+  +     Y+ QSAVPL  ETH GEDVAVF++GP AHL+HGV EQ 
Sbjct: 419 PGYKVVGGERENVSMVDYAHNNYQAQSAVPLRHETHGGEDVAVFSKGPMAHLLHGVHEQN 478

Query: 479 FIAHVMAFAACL 490
           ++ HVMA+AAC+
Sbjct: 479 YVPHVMAYAACI 490


>gi|188595718 tissue-nonspecific alkaline phosphatase precursor
           [Homo sapiens]
          Length = 524

 Score =  548 bits (1412), Expect = e-156
 Identities = 277/492 (56%), Positives = 361/492 (73%), Gaps = 9/492 (1%)

Query: 6   MLLLLLLLGLRLQLSLGIIPVEEENPDFWNREAAEALGAAKKLQPAQT-AAKNLIIFLGD 64
           M+   L+L +   L+  ++P +E++P +W  +A E L  A +LQ   T  AKN+I+FLGD
Sbjct: 1   MISPFLVLAIGTCLTNSLVPEKEKDPKYWRDQAQETLKYALELQKLNTNVAKNVIMFLGD 60

Query: 65  GMGVSTVTAARILKGQKKDKLGPEIPLAMDRFPYVALSKTYNVDKHVPDSGATATAYLCG 124
           GMGVSTVTAARILKGQ     G E  L MD+FP+VALSKTYN +  VPDS  TATAYLCG
Sbjct: 61  GMGVSTVTAARILKGQLHHNPGEETRLEMDKFPFVALSKTYNTNAQVPDSAGTATAYLCG 120

Query: 125 VKGNFQTIGLSAAARFNQCNTTRGNEVISVMNRAKKAGKSVGVVTTTRVQHASPAGTYAH 184
           VK N  T+G+SAA   ++CNTT+GNEV S++  AK AGKSVG+VTTTRV HA+P+  YAH
Sbjct: 121 VKANEGTVGVSAATERSRCNTTQGNEVTSILRWAKDAGKSVGIVTTTRVNHATPSAAYAH 180

Query: 185 TVNRNWYSDADVPASARQEGCQDIATQLISNM-DIDVILGGGRKYMFRMGTPDPEYPDDY 243
           + +R+WYSD ++P  A  +GC+DIA QL+ N+ DIDVI+GGGRKYM+     D EY  D 
Sbjct: 181 SADRDWYSDNEMPPEALSQGCKDIAYQLMHNIRDIDVIMGGGRKYMYPKNKTDVEYESDE 240

Query: 244 SQGGTRLDGKNLVQEWLA---KRQGARYVWNRTELMQASLDP-SVTHLMGLFEPGDMKYE 299
              GTRLDG +LV  W +   + + + ++WNRTEL+  +LDP +V +L+GLFEPGDM+YE
Sbjct: 241 KARGTRLDGLDLVDTWKSFKPRYKHSHFIWNRTELL--TLDPHNVDYLLGLFEPGDMQYE 298

Query: 300 IHRDSTLDPSLMEMTEAALRLLSRNPRGFFLFVEGGRIDHGHHESRAYRALTETIMFDDA 359
           ++R++  DPSL EM   A+++L +NP+GFFL VEGGRIDHGHHE +A +AL E +  D A
Sbjct: 299 LNRNNVTDPSLSEMVVVAIQILRKNPKGFFLLVEGGRIDHGHHEGKAKQALHEAVEMDRA 358

Query: 360 IERAGQLTSEEDTLSLVTADHSHVFSFGGYPLRGSSIFGLAPGKA-RDRKAYTVLLYGNG 418
           I +AG LTS EDTL++VTADHSHVF+FGGY  RG+SIFGLAP  +  D+K +T +LYGNG
Sbjct: 359 IGQAGSLTSSEDTLTVVTADHSHVFTFGGYTPRGNSIFGLAPMLSDTDKKPFTAILYGNG 418

Query: 419 PGYVLKDGARPDVTESESGSPEYRQQSAVPLDEETHAGEDVAVFARGPQAHLVHGVQEQT 478
           PGY +  G R +V+  +     Y+ QSAVPL  ETH GEDVAVF++GP AHL+HGV EQ 
Sbjct: 419 PGYKVVGGERENVSMVDYAHNNYQAQSAVPLRHETHGGEDVAVFSKGPMAHLLHGVHEQN 478

Query: 479 FIAHVMAFAACL 490
           ++ HVMA+AAC+
Sbjct: 479 YVPHVMAYAACI 490


>gi|66346693 FAT tumor suppressor 1 precursor [Homo sapiens]
          Length = 4588

 Score = 32.7 bits (73), Expect = 0.85
 Identities = 54/245 (22%), Positives = 86/245 (35%), Gaps = 28/245 (11%)

Query: 107  VDKHVPD---SGATATAYLCGVKGNFQTIGLSAAARFNQCNTTRGNEVISVMNRAKKAGK 163
            ++ H PD   SG    + L   +GNF    LS A R  Q       +V ++  RAK  GK
Sbjct: 949  LEAHDPDLGQSGQVRYSLLDHGEGNFDVDKLSGAVRIVQQLDFEKKQVYNLTVRAKDKGK 1008

Query: 164  SVGVVTTTRVQHASPAGTYAHTVNRNW----YSDADVPASARQEGCQDIATQLISNMDID 219
             V + +T  V+           VN N     +S      + +++         +S  D D
Sbjct: 1009 PVSLSSTCYVE------VEVVDVNENLHPPVFSSFVEKGTVKEDAPVGSLVMTVSAHDED 1062

Query: 220  VILGGGRKYMFRMGTPDPEYPDDYSQG----GTRLDGKNLVQEWL---AKRQGARYVWNR 272
                G  +Y  R G+    +      G      RLD ++    WL   A  QG   + + 
Sbjct: 1063 ARRDGEIRYSIRDGSGVGVFKIGEETGVIETSDRLDRESTSHYWLTVFATDQGVVPLSSF 1122

Query: 273  TELM--------QASLDPSVTHLMGLFEPGDMKYEIHRDSTLDPSLMEMTEAALRLLSRN 324
             E+          A       +   + E       + +    DP      +   ++ S N
Sbjct: 1123 IEIYIEVEDVNDNAPQTSEPVYYPEIMENSPKDVSVVQIEAFDPDSSSNDKLMYKITSGN 1182

Query: 325  PRGFF 329
            P+GFF
Sbjct: 1183 PQGFF 1187


>gi|16933557 dachsous 1 precursor [Homo sapiens]
          Length = 3298

 Score = 30.4 bits (67), Expect = 4.2
 Identities = 32/101 (31%), Positives = 48/101 (47%), Gaps = 24/101 (23%)

Query: 1   MLGPCMLLLLLLLGLRLQLSLG-----IIPVEEENPDFWNREAAEALGAAKKLQPAQTAA 55
           +L P +LLLLLLLG  +  + G      + ++EE P      A   +G      PA TAA
Sbjct: 21  LLLPLLLLLLLLLGAGVPGAWGQAGSLDLQIDEEQP------AGTLIGDISAGLPAGTAA 74

Query: 56  KNLIIFLG--DGMGVST----------VTAARILKGQKKDK 84
             L+ F+   +G GV T          V  AR+L  +++D+
Sbjct: 75  P-LMYFISAQEGSGVGTDLAIDEHSGVVRTARVLDREQRDR 114


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.318    0.134    0.398 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,035,021
Number of Sequences: 37866
Number of extensions: 974288
Number of successful extensions: 1929
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 1910
Number of HSP's gapped (non-prelim): 9
length of query: 535
length of database: 18,247,518
effective HSP length: 107
effective length of query: 428
effective length of database: 14,195,856
effective search space: 6075826368
effective search space used: 6075826368
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
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