Search of human proteins with 94158594

Search of human proteins with 94158594

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|94158594 ADP-ribose/CDP-alcohol pyrophosphatase [Homo
sapiens]
         (342 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|94158594 ADP-ribose/CDP-alcohol pyrophosphatase [Homo sapiens]     724   0.0  
gi|24307911 acid sphingomyelinase-like phosphodiesterase 3A [Hom...    40   0.003
gi|239755070 PREDICTED: similar to proprotein convertase subtili...    30   2.4  
gi|239749596 PREDICTED: hypothetical protein XP_002347099 [Homo ...    30   2.4  
gi|239743863 PREDICTED: hypothetical protein XP_002342982 [Homo ...    30   2.4  
gi|188528641 SEC14 and spectrin domains 1 [Homo sapiens]               30   3.1  
gi|39930602 TATA box binding protein like 2 [Homo sapiens]             30   3.1  
gi|56117840 sphingomyelin phosphodiesterase 1, acid lysosomal is...    29   5.3  
gi|66571327 ring finger protein 213 [Homo sapiens]                     29   5.3  
gi|57242800 acid sphingomyelinase-like phosphodiesterase 3B isof...    28   9.1  
gi|57242798 acid sphingomyelinase-like phosphodiesterase 3B isof...    28   9.1  

>gi|94158594 ADP-ribose/CDP-alcohol pyrophosphatase [Homo sapiens]
          Length = 342

 Score =  724 bits (1868), Expect = 0.0
 Identities = 342/342 (100%), Positives = 342/342 (100%)

Query: 1   MDDKPNPEALSDSSERLFSFGVIADVQFADLEDGFNFQGTRRRYYRHSLLHLQGAIEDWN 60
           MDDKPNPEALSDSSERLFSFGVIADVQFADLEDGFNFQGTRRRYYRHSLLHLQGAIEDWN
Sbjct: 1   MDDKPNPEALSDSSERLFSFGVIADVQFADLEDGFNFQGTRRRYYRHSLLHLQGAIEDWN 60

Query: 61  NESSMPCCVLQLGDIIDGYNAQYNASKKSLELVMDMFKRLKVPVHHTWGNHEFYNFSREY 120
           NESSMPCCVLQLGDIIDGYNAQYNASKKSLELVMDMFKRLKVPVHHTWGNHEFYNFSREY
Sbjct: 61  NESSMPCCVLQLGDIIDGYNAQYNASKKSLELVMDMFKRLKVPVHHTWGNHEFYNFSREY 120

Query: 121 LTHSKLNTKFLEDQIVHHPETMPSEDYYAYHFVPFPKFRFILLDAYDLSVLGVDQSSPKY 180
           LTHSKLNTKFLEDQIVHHPETMPSEDYYAYHFVPFPKFRFILLDAYDLSVLGVDQSSPKY
Sbjct: 121 LTHSKLNTKFLEDQIVHHPETMPSEDYYAYHFVPFPKFRFILLDAYDLSVLGVDQSSPKY 180

Query: 181 EQCMKILREHNPNTELNSPQGLSEPQFVQFNGGFSQEQLNWLNEVLTFSDTNQEKVVIVS 240
           EQCMKILREHNPNTELNSPQGLSEPQFVQFNGGFSQEQLNWLNEVLTFSDTNQEKVVIVS
Sbjct: 181 EQCMKILREHNPNTELNSPQGLSEPQFVQFNGGFSQEQLNWLNEVLTFSDTNQEKVVIVS 240

Query: 241 HLPIYPDASDNVCLAWNYRDALAVIWSHECVVCFFAGHTHDGGYSEDPFGVYHVNLEGVI 300
           HLPIYPDASDNVCLAWNYRDALAVIWSHECVVCFFAGHTHDGGYSEDPFGVYHVNLEGVI
Sbjct: 241 HLPIYPDASDNVCLAWNYRDALAVIWSHECVVCFFAGHTHDGGYSEDPFGVYHVNLEGVI 300

Query: 301 ETAPDSQAFGTVHVYPDKMMLKGRGRVPDRIMNYKKERAFHC 342
           ETAPDSQAFGTVHVYPDKMMLKGRGRVPDRIMNYKKERAFHC
Sbjct: 301 ETAPDSQAFGTVHVYPDKMMLKGRGRVPDRIMNYKKERAFHC 342


>gi|24307911 acid sphingomyelinase-like phosphodiesterase 3A [Homo
           sapiens]
          Length = 453

 Score = 40.0 bits (92), Expect = 0.003
 Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 4/80 (5%)

Query: 205 PQFVQFNGGFSQEQLNWLNEVLTFSDTNQEKVVIVSHLPI-YPDASDNV-CLAWNYRDAL 262
           P  +  N      Q  WL   L  S  N+EKV I++H+P+ Y  +S N+  +   Y + L
Sbjct: 216 PNIMTLNKTDPANQFEWLESTLNNSQQNKEKVYIIAHVPVGYLPSSQNITAMREYYNEKL 275

Query: 263 AVIWS--HECVVCFFAGHTH 280
             I+    + +   F GHTH
Sbjct: 276 IDIFQKYSDVIAGQFYGHTH 295


>gi|239755070 PREDICTED: similar to proprotein convertase
           subtilisin/kexin type 5 [Homo sapiens]
          Length = 853

 Score = 30.4 bits (67), Expect = 2.4
 Identities = 20/69 (28%), Positives = 31/69 (44%), Gaps = 6/69 (8%)

Query: 120 YLTHSKLNTKFLEDQIVHHPETMPSED------YYAYHFVPFPKFRFILLDAYDLSVLGV 173
           Y +  + +T F EDQ++ + +    ED      Y       + KF++ LLD  D+  L  
Sbjct: 785 YKSSYRESTSFEEDQVIEYRDRDYDEDDDDDIVYMGQDGTVYRKFKYGLLDDDDIDELEY 844

Query: 174 DQSSPKYEQ 182
           D  S  Y Q
Sbjct: 845 DDESYSYYQ 853


>gi|239749596 PREDICTED: hypothetical protein XP_002347099 [Homo
           sapiens]
          Length = 853

 Score = 30.4 bits (67), Expect = 2.4
 Identities = 20/69 (28%), Positives = 31/69 (44%), Gaps = 6/69 (8%)

Query: 120 YLTHSKLNTKFLEDQIVHHPETMPSED------YYAYHFVPFPKFRFILLDAYDLSVLGV 173
           Y +  + +T F EDQ++ + +    ED      Y       + KF++ LLD  D+  L  
Sbjct: 785 YKSSYRESTSFEEDQVIEYRDRDYDEDDDDDIVYMGQDGTVYRKFKYGLLDDDDIDELEY 844

Query: 174 DQSSPKYEQ 182
           D  S  Y Q
Sbjct: 845 DDESYSYYQ 853


>gi|239743863 PREDICTED: hypothetical protein XP_002342982 [Homo
           sapiens]
          Length = 853

 Score = 30.4 bits (67), Expect = 2.4
 Identities = 20/69 (28%), Positives = 31/69 (44%), Gaps = 6/69 (8%)

Query: 120 YLTHSKLNTKFLEDQIVHHPETMPSED------YYAYHFVPFPKFRFILLDAYDLSVLGV 173
           Y +  + +T F EDQ++ + +    ED      Y       + KF++ LLD  D+  L  
Sbjct: 785 YKSSYRESTSFEEDQVIEYRDRDYDEDDDDDIVYMGQDGTVYRKFKYGLLDDDDIDELEY 844

Query: 174 DQSSPKYEQ 182
           D  S  Y Q
Sbjct: 845 DDESYSYYQ 853


>gi|188528641 SEC14 and spectrin domains 1 [Homo sapiens]
          Length = 696

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 18/65 (27%), Positives = 29/65 (44%), Gaps = 4/65 (6%)

Query: 186 ILREHNPNTELNSPQGLSEPQFVQFNGGFSQEQLNWLNEVLTFSDTNQEKVVIVSHLPIY 245
           IL   N  T    P  L+E     F G  + + ++WLN+ L F    +E   ++  L + 
Sbjct: 125 ILVSANKLTRYIEPCQLTE----DFGGSLTYDHMDWLNKRLVFEKFTKESTSLLDELALI 180

Query: 246 PDASD 250
            + SD
Sbjct: 181 NNGSD 185


>gi|39930602 TATA box binding protein like 2 [Homo sapiens]
          Length = 375

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 7/65 (10%)

Query: 177 SPKYEQCMKILREHNPNTELNSPQGLSEPQFVQFNGGFSQEQLNWLNEVLTFSDTNQEKV 236
           SP     M IL   NP+T  NS      P+  + +G FS   L++L + +T    N+++ 
Sbjct: 62  SPVVPYDMYILNASNPDTAFNS-----NPEVKETSGDFSSVDLSFLPDEVT--QENKDQP 114

Query: 237 VIVSH 241
           VI  H
Sbjct: 115 VISKH 119


>gi|56117840 sphingomyelin phosphodiesterase 1, acid lysosomal
           isoform 1 precursor [Homo sapiens]
          Length = 631

 Score = 29.3 bits (64), Expect = 5.3
 Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 11/66 (16%)

Query: 218 QLNWLNEVLTFSDTNQEKVVIVSHLPIYPDASDNVCL---AWNYRDALAVIWSHECVVCF 274
           QL WL   L  ++   +KV I+ H+P         CL   +WNY   +A       +   
Sbjct: 404 QLQWLVGELQAAEDRGDKVHIIGHIP------PGHCLKSWSWNYYRIVARY--ENTLAAQ 455

Query: 275 FAGHTH 280
           F GHTH
Sbjct: 456 FFGHTH 461


>gi|66571327 ring finger protein 213 [Homo sapiens]
          Length = 3280

 Score = 29.3 bits (64), Expect = 5.3
 Identities = 10/31 (32%), Positives = 20/31 (64%)

Query: 236  VVIVSHLPIYPDASDNVCLAWNYRDALAVIW 266
            +V+ +H+ +  +AS+NV  +W  +D L  +W
Sbjct: 1766 IVVQNHMNLSENASNNVPFSWKIKDYLEELW 1796


>gi|57242800 acid sphingomyelinase-like phosphodiesterase 3B isoform
           2 [Homo sapiens]
          Length = 373

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 19/72 (26%), Positives = 31/72 (43%), Gaps = 4/72 (5%)

Query: 217 EQLNWLNEVLTFSDTNQEKVVIVSHLP--IYPDASDNVCLAWNYRDA-LAVIWSHECVVC 273
           +Q  WL +VLT +    + V IV H+P   +    +       + +  L V+  H  V+ 
Sbjct: 212 QQFQWLEDVLTDASKAGDMVYIVGHVPPGFFEKTQNKAWFREGFNEKYLKVVRKHHRVIA 271

Query: 274 -FFAGHTHDGGY 284
             F GH H   +
Sbjct: 272 GQFFGHHHTDSF 283


>gi|57242798 acid sphingomyelinase-like phosphodiesterase 3B isoform
           1 [Homo sapiens]
          Length = 455

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 19/72 (26%), Positives = 31/72 (43%), Gaps = 4/72 (5%)

Query: 217 EQLNWLNEVLTFSDTNQEKVVIVSHLP--IYPDASDNVCLAWNYRDA-LAVIWSHECVVC 273
           +Q  WL +VLT +    + V IV H+P   +    +       + +  L V+  H  V+ 
Sbjct: 212 QQFQWLEDVLTDASKAGDMVYIVGHVPPGFFEKTQNKAWFREGFNEKYLKVVRKHHRVIA 271

Query: 274 -FFAGHTHDGGY 284
             F GH H   +
Sbjct: 272 GQFFGHHHTDSF 283


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.321    0.137    0.433 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,851,520
Number of Sequences: 37866
Number of extensions: 623460
Number of successful extensions: 1232
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 1227
Number of HSP's gapped (non-prelim): 12
length of query: 342
length of database: 18,247,518
effective HSP length: 103
effective length of query: 239
effective length of database: 14,347,320
effective search space: 3429009480
effective search space used: 3429009480
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.