SMPDL3B 33314

Name: SMPDL3B	Sequence: fasta or formatted (455aa)		NCBI GI: 57242798
Description: acid sphingomyelinase-like phosphodiesterase 3B isoform 1		Referenced in: Sphingomyelin, Ceramides, and Glycolipids
Other entries for this name: alt prot [373aa] acid sphingomyelinase-like phosphodiesterase 3B isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.2 42 2 C cysteine 1.8 8 1 D aspartate 6.4 29 2 E glutamate 4.6 21 1 F phenylalanine 4.4 20 2 G glycine 6.8 31 2 H histidine 3.1 14 3 I isoleucine 4.2 19 1 K lysine 4.4 20 2 L leucine 9.5 43 3 M methionine 2.6 12 1 N asparagine 4.2 19 2 P proline 6.8 31 2 Q glutamine 3.7 17 2 R arginine 3.3 15 1 S serine 5.3 24 2 T threonine 5.5 25 2 V valine 7.0 32 2 W tryptophan 2.6 12 1 Y tyrosine 4.6 21 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 acid sphingomyelinase-like phosphodiesterase 3B isof... SMPDL3B 0.738 acid sphingomyelinase-like phosphodiesterase 3B isof... SMPDL3A 0.358 acid sphingomyelinase-like phosphodiesterase 3A [Hom... SMPD1 0.182 sphingomyelin phosphodiesterase 1, acid lysosomal is... SMPD1 0.137 sphingomyelin phosphodiesterase 1, acid lysosomal is... CPPED1 0.006 calcineurin-like phosphoesterase domain containing ... USH2A 0.005 usherin isoform B MLL2 0.005 myeloid/lymphoid or mixed-lineage leukemia 2 AES 0.005 amino-terminal enhancer of split isoform c AES 0.005 amino-terminal enhancer of split isoform a AES 0.005 amino-terminal enhancer of split isoform b Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.