Search of human proteins with 93588500

Search of human proteins with 93588500

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|93588500 angiotensin II receptor-associated protein isoform
a [Homo sapiens]
         (159 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|93588500 angiotensin II receptor-associated protein isoform a...   324   2e-89
gi|93588491 angiotensin II receptor-associated protein isoform b...   303   4e-83
gi|93588611 angiotensin II receptor-associated protein isoform e...    44   4e-05
gi|93588503 angiotensin II receptor-associated protein isoform d...    44   4e-05
gi|153791893 zinc finger, BED-type containing 4 [Homo sapiens]         31   0.39 
gi|20373171 vang-like 1 [Homo sapiens]                                 30   0.67 
gi|239757927 PREDICTED: similar to melanoma antigen family C, 2 ...    27   9.6  
gi|4507005 solute carrier family 22 member 5 [Homo sapiens]            27   9.6  
gi|4507035 solute carrier family 5 (sodium iodide symporter), me...    27   9.6  
gi|7706605 melanoma antigen family C, 2 [Homo sapiens]                 27   9.6  

>gi|93588500 angiotensin II receptor-associated protein isoform a
           [Homo sapiens]
          Length = 159

 Score =  324 bits (830), Expect = 2e-89
 Identities = 159/159 (100%), Positives = 159/159 (100%)

Query: 1   MELPAVNLKVILLGHWLLTTWGCIVFSGSYAWANFTILALGVWAVAQRDSIDAISMFLGG 60
           MELPAVNLKVILLGHWLLTTWGCIVFSGSYAWANFTILALGVWAVAQRDSIDAISMFLGG
Sbjct: 1   MELPAVNLKVILLGHWLLTTWGCIVFSGSYAWANFTILALGVWAVAQRDSIDAISMFLGG 60

Query: 61  LLATIFLDIVHISIFYPRVSLTDTGRFGVGMAILSLLLKPLSCCFVYHMYRERGGELLVH 120
           LLATIFLDIVHISIFYPRVSLTDTGRFGVGMAILSLLLKPLSCCFVYHMYRERGGELLVH
Sbjct: 61  LLATIFLDIVHISIFYPRVSLTDTGRFGVGMAILSLLLKPLSCCFVYHMYRERGGELLVH 120

Query: 121 TGFLGSSQDRSAYQTIDSAEAPADPFAVPEGRSQDARGY 159
           TGFLGSSQDRSAYQTIDSAEAPADPFAVPEGRSQDARGY
Sbjct: 121 TGFLGSSQDRSAYQTIDSAEAPADPFAVPEGRSQDARGY 159


>gi|93588491 angiotensin II receptor-associated protein isoform b
           [Homo sapiens]
          Length = 152

 Score =  303 bits (776), Expect = 4e-83
 Identities = 152/159 (95%), Positives = 152/159 (95%), Gaps = 7/159 (4%)

Query: 1   MELPAVNLKVILLGHWLLTTWGCIVFSGSYAWANFTILALGVWAVAQRDSIDAISMFLGG 60
           MELPAVNLKVILLGHWLLTTWGCIVFSGSYAWANFTILALGVWAVAQRDSIDAISMFLGG
Sbjct: 1   MELPAVNLKVILLGHWLLTTWGCIVFSGSYAWANFTILALGVWAVAQRDSIDAISMFLGG 60

Query: 61  LLATIFLDIVHISIFYPRVSLTDTGRFGVGMAILSLLLKPLSCCFVYHMYRERGGELLVH 120
           LLATIFLDIVHISIFYPRVSLTDTGRFGVGMAILSLLLKPLSCCFVYHMYRERG      
Sbjct: 61  LLATIFLDIVHISIFYPRVSLTDTGRFGVGMAILSLLLKPLSCCFVYHMYRERG------ 114

Query: 121 TGFLGSSQDRSAYQTIDSAEAPADPFAVPEGRSQDARGY 159
            GFLGSSQDRSAYQTIDSAEAPADPFAVPEGRSQDARGY
Sbjct: 115 -GFLGSSQDRSAYQTIDSAEAPADPFAVPEGRSQDARGY 152


>gi|93588611 angiotensin II receptor-associated protein isoform e
          [Homo sapiens]
          Length = 147

 Score = 44.3 bits (103), Expect = 4e-05
 Identities = 20/20 (100%), Positives = 20/20 (100%)

Query: 1  MELPAVNLKVILLGHWLLTT 20
          MELPAVNLKVILLGHWLLTT
Sbjct: 1  MELPAVNLKVILLGHWLLTT 20


>gi|93588503 angiotensin II receptor-associated protein isoform d
          [Homo sapiens]
          Length = 155

 Score = 44.3 bits (103), Expect = 4e-05
 Identities = 20/20 (100%), Positives = 20/20 (100%)

Query: 1  MELPAVNLKVILLGHWLLTT 20
          MELPAVNLKVILLGHWLLTT
Sbjct: 1  MELPAVNLKVILLGHWLLTT 20


>gi|153791893 zinc finger, BED-type containing 4 [Homo sapiens]
          Length = 1171

 Score = 31.2 bits (69), Expect = 0.39
 Identities = 15/38 (39%), Positives = 21/38 (55%)

Query: 104 CFVYHMYRERGGELLVHTGFLGSSQDRSAYQTIDSAEA 141
           C + H+YR     +    GFLG+S   S Y T+ SAE+
Sbjct: 496 CLMRHLYRRHPEVVGSQKGFLGASLANSPYATLASAES 533


>gi|20373171 vang-like 1 [Homo sapiens]
          Length = 524

 Score = 30.4 bits (67), Expect = 0.67
 Identities = 29/100 (29%), Positives = 41/100 (41%), Gaps = 20/100 (20%)

Query: 37  ILALGVWAV---AQRDSIDAISMFLGGLLATIFLDIVHISIFYP---------------- 77
           IL +G WA+    +R  +  + +F   LL  IFL +V   +FY                 
Sbjct: 162 ILLIGTWALFFRKRRADMPRVFVFRALLLVLIFLFVVSYWLFYGVRILDSRDRNYQGIVQ 221

Query: 78  -RVSLTDTGRFGVGMAILSLLLKPLSCCFVYHMYRERGGE 116
             VSL D   F   +AI+ L L+ L   F   + R   GE
Sbjct: 222 YAVSLVDALLFIHYLAIVLLELRQLQPMFTLQVVRSTDGE 261


>gi|239757927 PREDICTED: similar to melanoma antigen family C, 2
           [Homo sapiens]
          Length = 464

 Score = 26.6 bits (57), Expect = 9.6
 Identities = 18/45 (40%), Positives = 22/45 (48%)

Query: 62  LATIFLDIVHISIFYPRVSLTDTGRFGVGMAILSLLLKPLSCCFV 106
           LA I +   H  +F   V LTD G    GM   SLL+  LS  F+
Sbjct: 195 LALIEVGPDHFCVFANTVGLTDEGSDDEGMPENSLLIIILSVIFI 239


>gi|4507005 solute carrier family 22 member 5 [Homo sapiens]
          Length = 557

 Score = 26.6 bits (57), Expect = 9.6
 Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 1/40 (2%)

Query: 53  AISMFLGGLLATIFLDIVHISIFYPRVSLTDTGRFGVGMA 92
           A ++FLGG +  +F+ +V   ++Y    L   G+FGV  A
Sbjct: 404 ATALFLGGSVL-LFMQLVPPDLYYLATVLVMVGKFGVTAA 442


>gi|4507035 solute carrier family 5 (sodium iodide symporter),
           member 5 [Homo sapiens]
          Length = 643

 Score = 26.6 bits (57), Expect = 9.6
 Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 1/48 (2%)

Query: 37  ILALGVWAVAQRDSIDAISMFLGGLLATIFLDIVHISIFYPRVSLTDT 84
           +  LGV + A R  +  + M LG LL ++   ++ + +FY R+ LT T
Sbjct: 71  VQVLGVPSEAYRYGLKFLWMCLGQLLNSVLTALLFMPVFY-RLGLTST 117


>gi|7706605 melanoma antigen family C, 2 [Homo sapiens]
          Length = 373

 Score = 26.6 bits (57), Expect = 9.6
 Identities = 18/45 (40%), Positives = 22/45 (48%)

Query: 62  LATIFLDIVHISIFYPRVSLTDTGRFGVGMAILSLLLKPLSCCFV 106
           LA I +   H  +F   V LTD G    GM   SLL+  LS  F+
Sbjct: 195 LALIEVGPDHFCVFANTVGLTDEGSDDEGMPENSLLIIILSVIFI 239


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.327    0.141    0.447 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,611,105
Number of Sequences: 37866
Number of extensions: 213701
Number of successful extensions: 538
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 530
Number of HSP's gapped (non-prelim): 10
length of query: 159
length of database: 18,247,518
effective HSP length: 94
effective length of query: 65
effective length of database: 14,688,114
effective search space: 954727410
effective search space used: 954727410
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.