Search of human proteins with 14150132

Search of human proteins with 14150132

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|14150132 hypothetical protein LOC84302 [Homo sapiens]
         (403 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|14150132 hypothetical protein LOC84302 [Homo sapiens]              831   0.0  
gi|42794760 acyl-CoA synthetase long-chain family member 5 isofo...    29   8.6  
gi|42794758 acyl-CoA synthetase long-chain family member 5 isofo...    29   8.6  
gi|42794756 acyl-CoA synthetase long-chain family member 5 isofo...    29   8.6  
gi|163659918 sacsin [Homo sapiens]                                     29   8.6  
gi|239756058 PREDICTED: hypothetical protein XP_002344788 [Homo ...    29   8.6  
gi|239750551 PREDICTED: hypothetical protein [Homo sapiens]            29   8.6  
gi|239744848 PREDICTED: hypothetical protein XP_002344119 [Homo ...    29   8.6  

>gi|14150132 hypothetical protein LOC84302 [Homo sapiens]
          Length = 403

 Score =  831 bits (2146), Expect = 0.0
 Identities = 403/403 (100%), Positives = 403/403 (100%)

Query: 1   MSTSTSPAAMLLRRLRRLSWGSTAVQLFILTVVTFGLLAPLACHRLLHSYFYLRHWHLNQ 60
           MSTSTSPAAMLLRRLRRLSWGSTAVQLFILTVVTFGLLAPLACHRLLHSYFYLRHWHLNQ
Sbjct: 1   MSTSTSPAAMLLRRLRRLSWGSTAVQLFILTVVTFGLLAPLACHRLLHSYFYLRHWHLNQ 60

Query: 61  MSQEFLQQSLKEGEAALHYFEELPSANGSVPIVWQATPRPWLVITIITVDRQPGFHYVLQ 120
           MSQEFLQQSLKEGEAALHYFEELPSANGSVPIVWQATPRPWLVITIITVDRQPGFHYVLQ
Sbjct: 61  MSQEFLQQSLKEGEAALHYFEELPSANGSVPIVWQATPRPWLVITIITVDRQPGFHYVLQ 120

Query: 121 VVSQFHRLLQQCGPQCEGHQLFLCNVERSVSHFDAKLLSKYVPVANRYEGTEDDYGDDPS 180
           VVSQFHRLLQQCGPQCEGHQLFLCNVERSVSHFDAKLLSKYVPVANRYEGTEDDYGDDPS
Sbjct: 121 VVSQFHRLLQQCGPQCEGHQLFLCNVERSVSHFDAKLLSKYVPVANRYEGTEDDYGDDPS 180

Query: 181 TNSFEKEKQDYVYCLESSLQTYNPDYVLMVEDDAVPEEQIFPVLEHLLRARFSEPHLRDA 240
           TNSFEKEKQDYVYCLESSLQTYNPDYVLMVEDDAVPEEQIFPVLEHLLRARFSEPHLRDA
Sbjct: 181 TNSFEKEKQDYVYCLESSLQTYNPDYVLMVEDDAVPEEQIFPVLEHLLRARFSEPHLRDA 240

Query: 241 LYLKLYHPERLQHYINPEPMRILEWVGVGMLLGPLLTWIYMRFASRPGFSWPVMLFFSLY 300
           LYLKLYHPERLQHYINPEPMRILEWVGVGMLLGPLLTWIYMRFASRPGFSWPVMLFFSLY
Sbjct: 241 LYLKLYHPERLQHYINPEPMRILEWVGVGMLLGPLLTWIYMRFASRPGFSWPVMLFFSLY 300

Query: 301 SMGLVELVGRHYFLELRRLSPSLYSVVPASQCCTPAMLFPAPAARRTLTYLSQVYCHKGF 360
           SMGLVELVGRHYFLELRRLSPSLYSVVPASQCCTPAMLFPAPAARRTLTYLSQVYCHKGF
Sbjct: 301 SMGLVELVGRHYFLELRRLSPSLYSVVPASQCCTPAMLFPAPAARRTLTYLSQVYCHKGF 360

Query: 361 GKDMALYSLLRAKGERAYVVEPNLVKHIGLFSSLRYNFHPSLL 403
           GKDMALYSLLRAKGERAYVVEPNLVKHIGLFSSLRYNFHPSLL
Sbjct: 361 GKDMALYSLLRAKGERAYVVEPNLVKHIGLFSSLRYNFHPSLL 403


>gi|42794760 acyl-CoA synthetase long-chain family member 5 isoform
           b [Homo sapiens]
          Length = 683

 Score = 28.9 bits (63), Expect = 8.6
 Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 2/67 (2%)

Query: 164 VANRYEGTEDDYGDD--PSTNSFEKEKQDYVYCLESSLQTYNPDYVLMVEDDAVPEEQIF 221
           V + YE T DD      P  + FE+  Q  VY   + +  +  D  L+ +D    +  +F
Sbjct: 289 VEHAYEPTPDDVAISYLPLAHMFERIVQAVVYSCGARVGFFQGDIRLLADDMKTLKPTLF 348

Query: 222 PVLEHLL 228
           P +  LL
Sbjct: 349 PAVPRLL 355


>gi|42794758 acyl-CoA synthetase long-chain family member 5 isoform
           b [Homo sapiens]
          Length = 683

 Score = 28.9 bits (63), Expect = 8.6
 Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 2/67 (2%)

Query: 164 VANRYEGTEDDYGDD--PSTNSFEKEKQDYVYCLESSLQTYNPDYVLMVEDDAVPEEQIF 221
           V + YE T DD      P  + FE+  Q  VY   + +  +  D  L+ +D    +  +F
Sbjct: 289 VEHAYEPTPDDVAISYLPLAHMFERIVQAVVYSCGARVGFFQGDIRLLADDMKTLKPTLF 348

Query: 222 PVLEHLL 228
           P +  LL
Sbjct: 349 PAVPRLL 355


>gi|42794756 acyl-CoA synthetase long-chain family member 5 isoform
           a [Homo sapiens]
          Length = 739

 Score = 28.9 bits (63), Expect = 8.6
 Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 2/67 (2%)

Query: 164 VANRYEGTEDDYGDD--PSTNSFEKEKQDYVYCLESSLQTYNPDYVLMVEDDAVPEEQIF 221
           V + YE T DD      P  + FE+  Q  VY   + +  +  D  L+ +D    +  +F
Sbjct: 345 VEHAYEPTPDDVAISYLPLAHMFERIVQAVVYSCGARVGFFQGDIRLLADDMKTLKPTLF 404

Query: 222 PVLEHLL 228
           P +  LL
Sbjct: 405 PAVPRLL 411


>gi|163659918 sacsin [Homo sapiens]
          Length = 4579

 Score = 28.9 bits (63), Expect = 8.6
 Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 17/90 (18%)

Query: 44   HRLLHSYFYLRHWHLNQMSQEFLQQSLKEGEAALHYFEELPSANGSVPIVWQATPRPWLV 103
            H LL  Y ++ H HLN+    F  ++LK        F  + +     P+  QA  +P   
Sbjct: 1250 HILLEIYGFM-HDHLNEGKDSF--RALK--------FPWVWTGKKFCPLA-QAVIKP--- 1294

Query: 104  ITIITVDRQPGFHYVLQVVSQFHRLLQQCG 133
              I  +D QP  H V + +++FH+L + CG
Sbjct: 1295 --IHDLDLQPYLHNVPKTMAKFHQLFKVCG 1322


>gi|239756058 PREDICTED: hypothetical protein XP_002344788 [Homo
          sapiens]
          Length = 196

 Score = 28.9 bits (63), Expect = 8.6
 Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 4/42 (9%)

Query: 43 CHRLLHSYFYLRHWHLNQMSQEFLQQSLKEGEAALHYFEELP 84
          CHR  H+      W L+   +E LQQ+L+   ++  +F E P
Sbjct: 3  CHRFPHN----NRWFLHTKGREMLQQTLESAASSYAFFCEGP 40


>gi|239750551 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 196

 Score = 28.9 bits (63), Expect = 8.6
 Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 4/42 (9%)

Query: 43 CHRLLHSYFYLRHWHLNQMSQEFLQQSLKEGEAALHYFEELP 84
          CHR  H+      W L+   +E LQQ+L+   ++  +F E P
Sbjct: 3  CHRFPHN----NRWFLHTKGREMLQQTLESAASSYAFFCEGP 40


>gi|239744848 PREDICTED: hypothetical protein XP_002344119 [Homo
          sapiens]
          Length = 196

 Score = 28.9 bits (63), Expect = 8.6
 Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 4/42 (9%)

Query: 43 CHRLLHSYFYLRHWHLNQMSQEFLQQSLKEGEAALHYFEELP 84
          CHR  H+      W L+   +E LQQ+L+   ++  +F E P
Sbjct: 3  CHRFPHN----NRWFLHTKGREMLQQTLESAASSYAFFCEGP 40


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.325    0.139    0.439 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,430,720
Number of Sequences: 37866
Number of extensions: 786152
Number of successful extensions: 2300
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 2299
Number of HSP's gapped (non-prelim): 8
length of query: 403
length of database: 18,247,518
effective HSP length: 105
effective length of query: 298
effective length of database: 14,271,588
effective search space: 4252933224
effective search space used: 4252933224
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.