Search of human proteins with 14149785

Search of human proteins with 14149785

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|14149785 solute carrier family 10 (sodium/bile acid
cotransporter family), member 7 isoform c [Homo sapiens]
         (159 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|14149785 solute carrier family 10 (sodium/bile acid cotranspo...   311   1e-85
gi|71725371 solute carrier family 10 (sodium/bile acid cotranspo...   285   9e-78
gi|19923959 serine dehydratase-like [Homo sapiens]                     30   0.87 
gi|52627207 olfactory receptor, family 4, subfamily C, member 12...    27   5.6  
gi|153792694 baculoviral IAP repeat-containing 6 [Homo sapiens]        27   7.4  
gi|21361720 transmembrane protein 19 [Homo sapiens]                    27   7.4  

>gi|14149785 solute carrier family 10 (sodium/bile acid
           cotransporter family), member 7 isoform c [Homo sapiens]
          Length = 159

 Score =  311 bits (798), Expect = 1e-85
 Identities = 159/159 (100%), Positives = 159/159 (100%)

Query: 1   MRLLERMRKDWFMVGIVLAIAGAKLEPSIGVNGGPLKPEITVSYIAVATIFFNSGLSLKT 60
           MRLLERMRKDWFMVGIVLAIAGAKLEPSIGVNGGPLKPEITVSYIAVATIFFNSGLSLKT
Sbjct: 1   MRLLERMRKDWFMVGIVLAIAGAKLEPSIGVNGGPLKPEITVSYIAVATIFFNSGLSLKT 60

Query: 61  EELTSALVHLKLHLFIQIFTLAFFPATIWLFLQLLSITPINEWLLKGLQTVGCMPPPVSS 120
           EELTSALVHLKLHLFIQIFTLAFFPATIWLFLQLLSITPINEWLLKGLQTVGCMPPPVSS
Sbjct: 61  EELTSALVHLKLHLFIQIFTLAFFPATIWLFLQLLSITPINEWLLKGLQTVGCMPPPVSS 120

Query: 121 AVILTKAVGGNEAAAIFNSAFGSFLVSKHSLTCLLQLLL 159
           AVILTKAVGGNEAAAIFNSAFGSFLVSKHSLTCLLQLLL
Sbjct: 121 AVILTKAVGGNEAAAIFNSAFGSFLVSKHSLTCLLQLLL 159


>gi|71725371 solute carrier family 10 (sodium/bile acid
           cotransporter family), member 7 isoform b [Homo sapiens]
          Length = 340

 Score =  285 bits (730), Expect = 9e-78
 Identities = 145/145 (100%), Positives = 145/145 (100%)

Query: 1   MRLLERMRKDWFMVGIVLAIAGAKLEPSIGVNGGPLKPEITVSYIAVATIFFNSGLSLKT 60
           MRLLERMRKDWFMVGIVLAIAGAKLEPSIGVNGGPLKPEITVSYIAVATIFFNSGLSLKT
Sbjct: 1   MRLLERMRKDWFMVGIVLAIAGAKLEPSIGVNGGPLKPEITVSYIAVATIFFNSGLSLKT 60

Query: 61  EELTSALVHLKLHLFIQIFTLAFFPATIWLFLQLLSITPINEWLLKGLQTVGCMPPPVSS 120
           EELTSALVHLKLHLFIQIFTLAFFPATIWLFLQLLSITPINEWLLKGLQTVGCMPPPVSS
Sbjct: 61  EELTSALVHLKLHLFIQIFTLAFFPATIWLFLQLLSITPINEWLLKGLQTVGCMPPPVSS 120

Query: 121 AVILTKAVGGNEAAAIFNSAFGSFL 145
           AVILTKAVGGNEAAAIFNSAFGSFL
Sbjct: 121 AVILTKAVGGNEAAAIFNSAFGSFL 145


>gi|19923959 serine dehydratase-like [Homo sapiens]
          Length = 329

 Score = 30.0 bits (66), Expect = 0.87
 Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 2/36 (5%)

Query: 96  SITPINEWLLKGLQTVGCMPPPVSSAVILTKAVGGN 131
           ++  I   LL+ LQ  GC+PP ++S V++    GGN
Sbjct: 279 ALAAIYSGLLRRLQAEGCLPPSLTSVVVI--VCGGN 312


>gi|52627207 olfactory receptor, family 4, subfamily C, member 12
           [Homo sapiens]
          Length = 309

 Score = 27.3 bits (59), Expect = 5.6
 Identities = 19/86 (22%), Positives = 41/86 (47%), Gaps = 11/86 (12%)

Query: 40  ITVSYIAVATIFFNSGLSLKTEELTSALVHLKLHLFIQIFTLAFFPATIWLFLQLLSITP 99
           + VSY+ +     N+ L  + + L++ + H+       I  + FF   I+++L+ ++  P
Sbjct: 212 LVVSYVIILRSLKNNSLEGRCKALSTCISHI-------IVVVLFFVPCIFVYLRSVTTLP 264

Query: 100 INEWLLKGLQTVGCMPPPVSSAVILT 125
           I+    K +     M  P+ + V+ T
Sbjct: 265 ID----KAVAVFYTMVVPMLNPVVYT 286


>gi|153792694 baculoviral IAP repeat-containing 6 [Homo sapiens]
          Length = 4857

 Score = 26.9 bits (58), Expect = 7.4
 Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 17/76 (22%)

Query: 95   LSITPINEWLLKGLQTVGCMPPPVSSAVILTKAVGGNEAAAIFNSAFGSFL--------- 145
            ++I    E + +  +TV   PPP+ SAV     +  +  A     AFG FL         
Sbjct: 4120 VTIEQSGELVYEAPETVAAEPPPIKSAVQTMSPIPAHSLA-----AFGLFLRLPGYAEVL 4174

Query: 146  --VSKHSLTCLLQLLL 159
                KH+  CLL+L+L
Sbjct: 4175 LKERKHA-QCLLRLVL 4189


>gi|21361720 transmembrane protein 19 [Homo sapiens]
          Length = 336

 Score = 26.9 bits (58), Expect = 7.4
 Identities = 15/64 (23%), Positives = 30/64 (46%)

Query: 35  PLKPEITVSYIAVATIFFNSGLSLKTEELTSALVHLKLHLFIQIFTLAFFPATIWLFLQL 94
           P+ P   +  + V  +  ++GL  K+ + + AL  L +   + I   +FF + +  FL  
Sbjct: 48  PISPWRWLFSVVVPVLIVSNGLKKKSLDHSGALGGLVVGFILTIANFSFFTSLLMFFLSS 107

Query: 95  LSIT 98
             +T
Sbjct: 108 SKLT 111


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.326    0.140    0.418 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,596,993
Number of Sequences: 37866
Number of extensions: 204738
Number of successful extensions: 553
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 548
Number of HSP's gapped (non-prelim): 7
length of query: 159
length of database: 18,247,518
effective HSP length: 94
effective length of query: 65
effective length of database: 14,688,114
effective search space: 954727410
effective search space used: 954727410
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.