Search of human proteins with 83281447

Search of human proteins with 83281447

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|83281447 phytanoyl-CoA 2-hydroxylase isoform b precursor
[Homo sapiens]
         (238 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|83281447 phytanoyl-CoA 2-hydroxylase isoform b precursor [Hom...   503   e-143
gi|5453884 phytanoyl-CoA 2-hydroxylase isoform a precursor [Homo...   503   e-143
gi|154937350 phytanoyl-CoA dioxygenase domain containing 1 isofo...    54   2e-07
gi|154937352 phytanoyl-CoA dioxygenase domain containing 1 isofo...    51   8e-07
gi|218777830 inositol hexakisphosphate kinase 3 [Homo sapiens]         29   4.1  
gi|55769530 inositol hexakisphosphate kinase 3 [Homo sapiens]          29   4.1  
gi|170763506 general transcription factor IIIC, polypeptide 5 is...    28   5.3  
gi|58743365 ring finger protein 157 [Homo sapiens]                     28   9.1  

>gi|83281447 phytanoyl-CoA 2-hydroxylase isoform b precursor [Homo
           sapiens]
          Length = 238

 Score =  503 bits (1295), Expect = e-143
 Identities = 238/238 (100%), Positives = 238/238 (100%)

Query: 1   MRDVTISKSEYAPSEKMITKVQDFQEDKELFRYCTLPEILKYVECFTGPNIMAMHTMLIN 60
           MRDVTISKSEYAPSEKMITKVQDFQEDKELFRYCTLPEILKYVECFTGPNIMAMHTMLIN
Sbjct: 1   MRDVTISKSEYAPSEKMITKVQDFQEDKELFRYCTLPEILKYVECFTGPNIMAMHTMLIN 60

Query: 61  KPPDSGKKTSRHPLHQDLHYFPFRPSDLIVCAWTAMEHISRNNGCLVVLPGTHKGSLKPH 120
           KPPDSGKKTSRHPLHQDLHYFPFRPSDLIVCAWTAMEHISRNNGCLVVLPGTHKGSLKPH
Sbjct: 61  KPPDSGKKTSRHPLHQDLHYFPFRPSDLIVCAWTAMEHISRNNGCLVVLPGTHKGSLKPH 120

Query: 121 DYPKWEGGVNKMFHGIQDYEENKARVHLVMEKGDTVFFHPLLIHGSGQNKTQGFRKAISC 180
           DYPKWEGGVNKMFHGIQDYEENKARVHLVMEKGDTVFFHPLLIHGSGQNKTQGFRKAISC
Sbjct: 121 DYPKWEGGVNKMFHGIQDYEENKARVHLVMEKGDTVFFHPLLIHGSGQNKTQGFRKAISC 180

Query: 181 HFASADCHYIDVKGTSQENIEKEVVGIAHKFFGAENSVNLKDIWMFRARLVKGERTNL 238
           HFASADCHYIDVKGTSQENIEKEVVGIAHKFFGAENSVNLKDIWMFRARLVKGERTNL
Sbjct: 181 HFASADCHYIDVKGTSQENIEKEVVGIAHKFFGAENSVNLKDIWMFRARLVKGERTNL 238


>gi|5453884 phytanoyl-CoA 2-hydroxylase isoform a precursor [Homo
           sapiens]
          Length = 338

 Score =  503 bits (1295), Expect = e-143
 Identities = 238/238 (100%), Positives = 238/238 (100%)

Query: 1   MRDVTISKSEYAPSEKMITKVQDFQEDKELFRYCTLPEILKYVECFTGPNIMAMHTMLIN 60
           MRDVTISKSEYAPSEKMITKVQDFQEDKELFRYCTLPEILKYVECFTGPNIMAMHTMLIN
Sbjct: 101 MRDVTISKSEYAPSEKMITKVQDFQEDKELFRYCTLPEILKYVECFTGPNIMAMHTMLIN 160

Query: 61  KPPDSGKKTSRHPLHQDLHYFPFRPSDLIVCAWTAMEHISRNNGCLVVLPGTHKGSLKPH 120
           KPPDSGKKTSRHPLHQDLHYFPFRPSDLIVCAWTAMEHISRNNGCLVVLPGTHKGSLKPH
Sbjct: 161 KPPDSGKKTSRHPLHQDLHYFPFRPSDLIVCAWTAMEHISRNNGCLVVLPGTHKGSLKPH 220

Query: 121 DYPKWEGGVNKMFHGIQDYEENKARVHLVMEKGDTVFFHPLLIHGSGQNKTQGFRKAISC 180
           DYPKWEGGVNKMFHGIQDYEENKARVHLVMEKGDTVFFHPLLIHGSGQNKTQGFRKAISC
Sbjct: 221 DYPKWEGGVNKMFHGIQDYEENKARVHLVMEKGDTVFFHPLLIHGSGQNKTQGFRKAISC 280

Query: 181 HFASADCHYIDVKGTSQENIEKEVVGIAHKFFGAENSVNLKDIWMFRARLVKGERTNL 238
           HFASADCHYIDVKGTSQENIEKEVVGIAHKFFGAENSVNLKDIWMFRARLVKGERTNL
Sbjct: 281 HFASADCHYIDVKGTSQENIEKEVVGIAHKFFGAENSVNLKDIWMFRARLVKGERTNL 338


>gi|154937350 phytanoyl-CoA dioxygenase domain containing 1 isoform
           a [Homo sapiens]
          Length = 291

 Score = 53.5 bits (127), Expect = 2e-07
 Identities = 36/135 (26%), Positives = 58/135 (42%), Gaps = 4/135 (2%)

Query: 52  MAMHTMLINKPPDSGKKTSRHPLHQDLHYFPFRPSDLIVCAWTAMEHISRNNGCLVVLPG 111
           + + +M I K P  G + S H   QD  +    P   ++  W A+E  +  NGCL  +PG
Sbjct: 136 VVVQSMYIFKQPHFGGEVSPH---QDASFLYTEPLGRVLGVWIAVEDATLENGCLWFIPG 192

Query: 112 THKGSLKPHDYPKWEGGV-NKMFHGIQDYEENKARVHLVMEKGDTVFFHPLLIHGSGQNK 170
           +H   +         G      F G +   +N   V   +++G  V  H  ++H S QN 
Sbjct: 193 SHTSGVSRRMVRAPVGSAPGTSFLGSEPARDNSLFVPTPVQRGALVLIHGEVVHKSKQNL 252

Query: 171 TQGFRKAISCHFASA 185
           +   R+A + H   A
Sbjct: 253 SDRSRQAYTFHLMEA 267


>gi|154937352 phytanoyl-CoA dioxygenase domain containing 1 isoform
           c [Homo sapiens]
          Length = 270

 Score = 51.2 bits (121), Expect = 8e-07
 Identities = 33/132 (25%), Positives = 56/132 (42%), Gaps = 5/132 (3%)

Query: 55  HTMLINKPPDSGKKTSRHPLHQDLHYFPFRPSDLIVCAWTAMEHISRNNGCLVVLPGTHK 114
           H+  + +P   G+ +     HQD  +    P   ++  W A+E  +  NGCL  +PG+H 
Sbjct: 119 HSFKVQQPHFGGEVSP----HQDASFLYTEPLGRVLGVWIAVEDATLENGCLWFIPGSHT 174

Query: 115 GSLKPHDYPKWEGGV-NKMFHGIQDYEENKARVHLVMEKGDTVFFHPLLIHGSGQNKTQG 173
             +         G      F G +   +N   V   +++G  V  H  ++H S QN +  
Sbjct: 175 SGVSRRMVRAPVGSAPGTSFLGSEPARDNSLFVPTPVQRGALVLIHGEVVHKSKQNLSDR 234

Query: 174 FRKAISCHFASA 185
            R+A + H   A
Sbjct: 235 SRQAYTFHLMEA 246


>gi|218777830 inositol hexakisphosphate kinase 3 [Homo sapiens]
          Length = 410

 Score = 28.9 bits (63), Expect = 4.1
 Identities = 19/89 (21%), Positives = 39/89 (43%), Gaps = 8/89 (8%)

Query: 138 DYEENKARVHLVMEKGDTVFFHPLLI--------HGSGQNKTQGFRKAISCHFASADCHY 189
           +Y ENK    L++E   + + HP ++        HG   ++ +  R    C  +++ C  
Sbjct: 189 EYPENKRHRFLLLENVVSQYTHPCVLDLKMGTRQHGDDASEEKKARHMRKCAQSTSACLG 248

Query: 190 IDVKGTSQENIEKEVVGIAHKFFGAENSV 218
           + + G      +K+      K++G + SV
Sbjct: 249 VRICGMQVYQTDKKYFLCKDKYYGRKLSV 277


>gi|55769530 inositol hexakisphosphate kinase 3 [Homo sapiens]
          Length = 410

 Score = 28.9 bits (63), Expect = 4.1
 Identities = 19/89 (21%), Positives = 39/89 (43%), Gaps = 8/89 (8%)

Query: 138 DYEENKARVHLVMEKGDTVFFHPLLI--------HGSGQNKTQGFRKAISCHFASADCHY 189
           +Y ENK    L++E   + + HP ++        HG   ++ +  R    C  +++ C  
Sbjct: 189 EYPENKRHRFLLLENVVSQYTHPCVLDLKMGTRQHGDDASEEKKARHMRKCAQSTSACLG 248

Query: 190 IDVKGTSQENIEKEVVGIAHKFFGAENSV 218
           + + G      +K+      K++G + SV
Sbjct: 249 VRICGMQVYQTDKKYFLCKDKYYGRKLSV 277


>gi|170763506 general transcription factor IIIC, polypeptide 5
           isoform 2 [Homo sapiens]
          Length = 519

 Score = 28.5 bits (62), Expect = 5.3
 Identities = 24/74 (32%), Positives = 31/74 (41%), Gaps = 12/74 (16%)

Query: 162 LIHGSGQNKTQGFRKAISCHFASADCHYIDVKGTSQE-----------NIEKEVVGIAHK 210
           L  G G + T G RK  S  +   D  YI  +G               N+E E+  I H+
Sbjct: 366 LKQGLGPSGTSGARKPASSKYKLKDSVYIFREGALPPYRQMFYQLCDLNVE-ELQKIIHR 424

Query: 211 FFGAENSVNLKDIW 224
             GAENS   +D W
Sbjct: 425 NDGAENSCTERDGW 438


>gi|58743365 ring finger protein 157 [Homo sapiens]
          Length = 679

 Score = 27.7 bits (60), Expect = 9.1
 Identities = 19/77 (24%), Positives = 32/77 (41%), Gaps = 15/77 (19%)

Query: 146 VHLVMEKGDTVFFHPLLIHGSGQNKTQGFRKAISCHFASADCHYIDVKGTSQENIEKEVV 205
           VH V+++GD  F H  ++ G+ +  T G                  VK   Q+ +   V 
Sbjct: 201 VHAVVDEGDEYFGHCHVLLGTFEKHTDG---------------TFCVKPLKQKQVVDGVS 245

Query: 206 GIAHKFFGAENSVNLKD 222
            +  + +G EN  N +D
Sbjct: 246 YLLQEIYGIENKYNTQD 262


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.321    0.137    0.429 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,825,800
Number of Sequences: 37866
Number of extensions: 440825
Number of successful extensions: 690
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 686
Number of HSP's gapped (non-prelim): 8
length of query: 238
length of database: 18,247,518
effective HSP length: 99
effective length of query: 139
effective length of database: 14,498,784
effective search space: 2015330976
effective search space used: 2015330976
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.