Search of human proteins with 81295404

Search of human proteins with 81295404

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|81295404 acyl-Coenzyme A thioesterase 2, mitochondrial
isoform b [Homo sapiens]
         (439 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|81295404 acyl-Coenzyme A thioesterase 2, mitochondrial isofor...   883   0.0  
gi|81295407 acyl-Coenzyme A thioesterase 2, mitochondrial isofor...   875   0.0  
gi|32528282 acyl-CoA thioesterase 7 isoform hBACHb [Homo sapiens]      47   3e-05
gi|18640736 acyl-CoA thioesterase 12 [Homo sapiens]                    47   3e-05
gi|32528286 acyl-CoA thioesterase 7 isoform hBACHd [Homo sapiens]      46   8e-05
gi|32528284 acyl-CoA thioesterase 7 isoform hBACHc [Homo sapiens]      46   8e-05
gi|75709208 acyl-CoA thioesterase 7 isoform hBACHa [Homo sapiens]      46   8e-05
gi|62526045 zinc finger protein 638 [Homo sapiens]                     34   0.30 
gi|21626468 zinc finger protein 638 [Homo sapiens]                     34   0.30 
gi|46409302 NIPA-like domain containing 1 [Homo sapiens]               30   3.3  
gi|157738629 kinesin family member 13A isoform d [Homo sapiens]        30   5.7  
gi|157738627 kinesin family member 13A isoform c [Homo sapiens]        30   5.7  
gi|157738625 kinesin family member 13A isoform b [Homo sapiens]        30   5.7  
gi|157738621 kinesin family member 13A isoform a [Homo sapiens]        30   5.7  
gi|39995078 hypothetical protein LOC60684 isoform b [Homo sapiens]     29   7.4  
gi|39995076 hypothetical protein LOC60684 isoform a [Homo sapiens]     29   7.4  

>gi|81295404 acyl-Coenzyme A thioesterase 2, mitochondrial isoform b
           [Homo sapiens]
          Length = 439

 Score =  883 bits (2281), Expect = 0.0
 Identities = 439/439 (100%), Positives = 439/439 (100%)

Query: 1   MRRAALRLCALGKGQLTPGRGLTQGPQNPKKQGIFHIHEVRDKLREIVGASTNWRDHVKA 60
           MRRAALRLCALGKGQLTPGRGLTQGPQNPKKQGIFHIHEVRDKLREIVGASTNWRDHVKA
Sbjct: 1   MRRAALRLCALGKGQLTPGRGLTQGPQNPKKQGIFHIHEVRDKLREIVGASTNWRDHVKA 60

Query: 61  MEERKLLHSFLAKSQDGLPPRRMKDSYIEVLLPLGSEPELREKYLTVQNTVRFGRILEDL 120
           MEERKLLHSFLAKSQDGLPPRRMKDSYIEVLLPLGSEPELREKYLTVQNTVRFGRILEDL
Sbjct: 61  MEERKLLHSFLAKSQDGLPPRRMKDSYIEVLLPLGSEPELREKYLTVQNTVRFGRILEDL 120

Query: 121 DSLGVLICYMHNKIHSAKMSPLSIVTALVDKIDMCKKSLSPEQDIKFSGHVSWVGKTSME 180
           DSLGVLICYMHNKIHSAKMSPLSIVTALVDKIDMCKKSLSPEQDIKFSGHVSWVGKTSME
Sbjct: 121 DSLGVLICYMHNKIHSAKMSPLSIVTALVDKIDMCKKSLSPEQDIKFSGHVSWVGKTSME 180

Query: 181 VKMQMFQLHGDEFCPVLDATFVMVARDSENKGPAFVNPLIPESPEEEELFRQGELNKGRR 240
           VKMQMFQLHGDEFCPVLDATFVMVARDSENKGPAFVNPLIPESPEEEELFRQGELNKGRR
Sbjct: 181 VKMQMFQLHGDEFCPVLDATFVMVARDSENKGPAFVNPLIPESPEEEELFRQGELNKGRR 240

Query: 241 IAFSSTSLLKMAPSAEERTTIHEMFLSTLDPKTISFRSRVLPSNAVWMENSKLKSLEICH 300
           IAFSSTSLLKMAPSAEERTTIHEMFLSTLDPKTISFRSRVLPSNAVWMENSKLKSLEICH
Sbjct: 241 IAFSSTSLLKMAPSAEERTTIHEMFLSTLDPKTISFRSRVLPSNAVWMENSKLKSLEICH 300

Query: 301 PQERNIFNRIFGGFLMRKAYELAWATACSFGGSRPFVVAVDDIMFQKPVEVGSLLFLSSQ 360
           PQERNIFNRIFGGFLMRKAYELAWATACSFGGSRPFVVAVDDIMFQKPVEVGSLLFLSSQ
Sbjct: 301 PQERNIFNRIFGGFLMRKAYELAWATACSFGGSRPFVVAVDDIMFQKPVEVGSLLFLSSQ 360

Query: 361 VCFTQNNYIQVRVHSEVASLQEKQHTTTNVFHFTFMSEKEVPLVFPKTYGESMLYLDGQR 420
           VCFTQNNYIQVRVHSEVASLQEKQHTTTNVFHFTFMSEKEVPLVFPKTYGESMLYLDGQR
Sbjct: 361 VCFTQNNYIQVRVHSEVASLQEKQHTTTNVFHFTFMSEKEVPLVFPKTYGESMLYLDGQR 420

Query: 421 HFNSMSGPATLRKDYLVEP 439
           HFNSMSGPATLRKDYLVEP
Sbjct: 421 HFNSMSGPATLRKDYLVEP 439


>gi|81295407 acyl-Coenzyme A thioesterase 2, mitochondrial isoform a
           [Homo sapiens]
          Length = 448

 Score =  875 bits (2261), Expect = 0.0
 Identities = 439/448 (97%), Positives = 439/448 (97%), Gaps = 9/448 (2%)

Query: 1   MRRAALRLCALGKGQLTPGRGLTQGPQNPKKQGIFHIHE---------VRDKLREIVGAS 51
           MRRAALRLCALGKGQLTPGRGLTQGPQNPKKQGIFHIHE         VRDKLREIVGAS
Sbjct: 1   MRRAALRLCALGKGQLTPGRGLTQGPQNPKKQGIFHIHEACSSIHVNHVRDKLREIVGAS 60

Query: 52  TNWRDHVKAMEERKLLHSFLAKSQDGLPPRRMKDSYIEVLLPLGSEPELREKYLTVQNTV 111
           TNWRDHVKAMEERKLLHSFLAKSQDGLPPRRMKDSYIEVLLPLGSEPELREKYLTVQNTV
Sbjct: 61  TNWRDHVKAMEERKLLHSFLAKSQDGLPPRRMKDSYIEVLLPLGSEPELREKYLTVQNTV 120

Query: 112 RFGRILEDLDSLGVLICYMHNKIHSAKMSPLSIVTALVDKIDMCKKSLSPEQDIKFSGHV 171
           RFGRILEDLDSLGVLICYMHNKIHSAKMSPLSIVTALVDKIDMCKKSLSPEQDIKFSGHV
Sbjct: 121 RFGRILEDLDSLGVLICYMHNKIHSAKMSPLSIVTALVDKIDMCKKSLSPEQDIKFSGHV 180

Query: 172 SWVGKTSMEVKMQMFQLHGDEFCPVLDATFVMVARDSENKGPAFVNPLIPESPEEEELFR 231
           SWVGKTSMEVKMQMFQLHGDEFCPVLDATFVMVARDSENKGPAFVNPLIPESPEEEELFR
Sbjct: 181 SWVGKTSMEVKMQMFQLHGDEFCPVLDATFVMVARDSENKGPAFVNPLIPESPEEEELFR 240

Query: 232 QGELNKGRRIAFSSTSLLKMAPSAEERTTIHEMFLSTLDPKTISFRSRVLPSNAVWMENS 291
           QGELNKGRRIAFSSTSLLKMAPSAEERTTIHEMFLSTLDPKTISFRSRVLPSNAVWMENS
Sbjct: 241 QGELNKGRRIAFSSTSLLKMAPSAEERTTIHEMFLSTLDPKTISFRSRVLPSNAVWMENS 300

Query: 292 KLKSLEICHPQERNIFNRIFGGFLMRKAYELAWATACSFGGSRPFVVAVDDIMFQKPVEV 351
           KLKSLEICHPQERNIFNRIFGGFLMRKAYELAWATACSFGGSRPFVVAVDDIMFQKPVEV
Sbjct: 301 KLKSLEICHPQERNIFNRIFGGFLMRKAYELAWATACSFGGSRPFVVAVDDIMFQKPVEV 360

Query: 352 GSLLFLSSQVCFTQNNYIQVRVHSEVASLQEKQHTTTNVFHFTFMSEKEVPLVFPKTYGE 411
           GSLLFLSSQVCFTQNNYIQVRVHSEVASLQEKQHTTTNVFHFTFMSEKEVPLVFPKTYGE
Sbjct: 361 GSLLFLSSQVCFTQNNYIQVRVHSEVASLQEKQHTTTNVFHFTFMSEKEVPLVFPKTYGE 420

Query: 412 SMLYLDGQRHFNSMSGPATLRKDYLVEP 439
           SMLYLDGQRHFNSMSGPATLRKDYLVEP
Sbjct: 421 SMLYLDGQRHFNSMSGPATLRKDYLVEP 448


>gi|32528282 acyl-CoA thioesterase 7 isoform hBACHb [Homo sapiens]
          Length = 380

 Score = 47.0 bits (110), Expect = 3e-05
 Identities = 72/379 (18%), Positives = 145/379 (38%), Gaps = 56/379 (14%)

Query: 71  LAKSQDGLPPRRMKDSYIEVLLPLGSEPE---------LREKYLTVQNTVRFGRILEDLD 121
           L   Q  + PRR   + ++V+ P    P          +R     V   V  G IL+ ++
Sbjct: 22  LVAGQGCVGPRRGCCAPVQVVGPRADLPPCGACITGRIMRPDDANVAGNVHGGTILKMIE 81

Query: 122 SLGVLICYMHNKIHSAKMSPLSIVTALVDKIDMCKKSLSPEQDIKFSGHVSWVGKTSMEV 181
             G +I   H    + +    ++  A V++ D        E     S  +++  K S+EV
Sbjct: 82  EAGAIISTRHCNSQNGERCVAAL--ARVERTDFLSPMCIGEV-AHVSAEITYTSKHSVEV 138

Query: 182 KMQMFQLHGDEFCPVLDATFVMVARDSENKGPAFVNPLIPESPEEE------ELFRQGEL 235
           ++            V+    +  A+   NK   +  PL  ++ ++          RQ + 
Sbjct: 139 QVN-----------VMSENILTGAKKLTNKATLWYVPLSLKNVDKVLEVPPVVYSRQEQE 187

Query: 236 NKGRRIAFSSTSLLKMAPSAEERTTIHEMFLSTLDPKTISFRSRVLPSNAVWMENSKLKS 295
            +GR+  + +  L +M         +  +     +P T+S+              S+   
Sbjct: 188 EEGRK-RYEAQKLERMETKWRNGDIVQPVL--NPEPNTVSY--------------SQSSL 230

Query: 296 LEICHPQERNIFNRIFGGFLMRKAYELAWATACSFGGSRPFVVAVDDIMFQKPVEVGSLL 355
           + +  P +  +   + GG  M+   E+A   A     +     +VD I F   +  G ++
Sbjct: 231 IHLVGPSDCTLHGFVHGGVTMKLMDEVAGIVAARHCKTNIVTASVDAINFHDKIRKGCVI 290

Query: 356 FLSSQVCFTQNNYIQVRV---HSEVASLQEKQHTTTNVFHFTFMSEKE------VPLVFP 406
            +S ++ FT N  +++ V      V    +K++   + F FT++S  +      VP + P
Sbjct: 291 TISGRMTFTSNKSMEIEVLVDADPVVDSSQKRYRAASAF-FTYVSLSQEGRSLPVPQLVP 349

Query: 407 KTYGESMLYLDGQRHFNSM 425
           +T  E   + +G+  +  M
Sbjct: 350 ETEDEKKRFEEGKGRYLQM 368


>gi|18640736 acyl-CoA thioesterase 12 [Homo sapiens]
          Length = 555

 Score = 47.0 bits (110), Expect = 3e-05
 Identities = 71/322 (22%), Positives = 122/322 (37%), Gaps = 48/322 (14%)

Query: 100 LREKYLTVQNTVRFGRILEDLDSLGVLICYMHNKIHSAKMSPLSIVTALVDKIDMCKKSL 159
           ++  + T +  +  G++L+ +D+   L    H        + +S VTA VD I   +++ 
Sbjct: 15  IQPAHATARGELSAGQLLKWIDTTACLAAEKH--------AGVSCVTASVDDIQF-EETA 65

Query: 160 SPEQDIKFSGHVSWVGKTSMEVKMQMF---QLHG-DEFCPVLDATFVMVARDSENKGPAF 215
              Q I     V+    TSME+ +++     L G ++   V  +TFV      E      
Sbjct: 66  RVGQVITIKAKVTRAFSTSMEISIKVMVQDMLTGIEKLVSVAFSTFVAKPVGKEKIHLKP 125

Query: 216 VNPLIPESPEEEELFRQGELNKGRRIAFSSTSLLKMAPSAEERTTI---HEMFLSTLDPK 272
           V  L  +   E  L                         A ER  +   HE   + L  +
Sbjct: 126 VTLLTEQDHVEHNL-------------------------AAERRKVRLQHEDTFNNLMKE 160

Query: 273 TISFRSRVLPSN--AVWMENSKLKSLEICHPQERNIFNRIFGGFLMRKAYELAWATACSF 330
           +  F   +      AV    + ++S+E+  P   N     FGG +M     +A  +A   
Sbjct: 161 SSKFDDLIFDEEEGAVSTRGTSVQSIELVLPPHANHHGNTFGGQIMAWMETVATISASRL 220

Query: 331 GGSRPFVVAVDDIMFQKPVEVGSLLFLSSQVCFTQNNYIQVRVHSEVASLQE-----KQH 385
             + PF+ +VD   F+ P  VG  L  ++ V  T    ++V V  E    QE      +H
Sbjct: 221 CWAHPFLKSVDMFKFRGPSTVGDRLVFTAIVNNTFQTCVEVGVRVEAFDCQEWAEGRGRH 280

Query: 386 TTTNVFHFTFMSEKEVPLVFPK 407
             +    +    +KE  + FP+
Sbjct: 281 INSAFLIYNAADDKENLITFPR 302


>gi|32528286 acyl-CoA thioesterase 7 isoform hBACHd [Homo sapiens]
          Length = 329

 Score = 45.8 bits (107), Expect = 8e-05
 Identities = 64/341 (18%), Positives = 132/341 (38%), Gaps = 47/341 (13%)

Query: 100 LREKYLTVQNTVRFGRILEDLDSLGVLICYMHNKIHSAKMSPLSIVTALVDKIDMCKKSL 159
           +R     V   V  G IL+ ++  G +I   H    + +    ++  A V++ D      
Sbjct: 9   MRPDDANVAGNVHGGTILKMIEEAGAIISTRHCNSQNGERCVAAL--ARVERTDFLSPMC 66

Query: 160 SPEQDIKFSGHVSWVGKTSMEVKMQMFQLHGDEFCPVLDATFVMVARDSENKGPAFVNPL 219
             E     S  +++  K S+EV++            V+    +  A+   NK   +  PL
Sbjct: 67  IGEV-AHVSAEITYTSKHSVEVQVN-----------VMSENILTGAKKLTNKATLWYVPL 114

Query: 220 IPESPEEE------ELFRQGELNKGRRIAFSSTSLLKMAPSAEERTTIHEMFLSTLDPKT 273
             ++ ++          RQ +  +GR+  + +  L +M         +  +     +P T
Sbjct: 115 SLKNVDKVLEVPPVVYSRQEQEEEGRK-RYEAQKLERMETKWRNGDIVQPVL--NPEPNT 171

Query: 274 ISFRSRVLPSNAVWMENSKLKSLEICHPQERNIFNRIFGGFLMRKAYELAWATACSFGGS 333
           +S+              S+   + +  P +  +   + GG  M+   E+A   A     +
Sbjct: 172 VSY--------------SQSSLIHLVGPSDCTLHGFVHGGVTMKLMDEVAGIVAARHCKT 217

Query: 334 RPFVVAVDDIMFQKPVEVGSLLFLSSQVCFTQNNYIQVRV---HSEVASLQEKQHTTTNV 390
                +VD I F   +  G ++ +S ++ FT N  +++ V      V    +K++   + 
Sbjct: 218 NIVTASVDAINFHDKIRKGCVITISGRMTFTSNKSMEIEVLVDADPVVDSSQKRYRAASA 277

Query: 391 FHFTFMSEKE------VPLVFPKTYGESMLYLDGQRHFNSM 425
           F FT++S  +      VP + P+T  E   + +G+  +  M
Sbjct: 278 F-FTYVSLSQEGRSLPVPQLVPETEDEKKRFEEGKGRYLQM 317


>gi|32528284 acyl-CoA thioesterase 7 isoform hBACHc [Homo sapiens]
          Length = 350

 Score = 45.8 bits (107), Expect = 8e-05
 Identities = 64/341 (18%), Positives = 132/341 (38%), Gaps = 47/341 (13%)

Query: 100 LREKYLTVQNTVRFGRILEDLDSLGVLICYMHNKIHSAKMSPLSIVTALVDKIDMCKKSL 159
           +R     V   V  G IL+ ++  G +I   H    + +    ++  A V++ D      
Sbjct: 30  MRPDDANVAGNVHGGTILKMIEEAGAIISTRHCNSQNGERCVAAL--ARVERTDFLSPMC 87

Query: 160 SPEQDIKFSGHVSWVGKTSMEVKMQMFQLHGDEFCPVLDATFVMVARDSENKGPAFVNPL 219
             E     S  +++  K S+EV++            V+    +  A+   NK   +  PL
Sbjct: 88  IGEV-AHVSAEITYTSKHSVEVQVN-----------VMSENILTGAKKLTNKATLWYVPL 135

Query: 220 IPESPEEE------ELFRQGELNKGRRIAFSSTSLLKMAPSAEERTTIHEMFLSTLDPKT 273
             ++ ++          RQ +  +GR+  + +  L +M         +  +     +P T
Sbjct: 136 SLKNVDKVLEVPPVVYSRQEQEEEGRK-RYEAQKLERMETKWRNGDIVQPVL--NPEPNT 192

Query: 274 ISFRSRVLPSNAVWMENSKLKSLEICHPQERNIFNRIFGGFLMRKAYELAWATACSFGGS 333
           +S+              S+   + +  P +  +   + GG  M+   E+A   A     +
Sbjct: 193 VSY--------------SQSSLIHLVGPSDCTLHGFVHGGVTMKLMDEVAGIVAARHCKT 238

Query: 334 RPFVVAVDDIMFQKPVEVGSLLFLSSQVCFTQNNYIQVRV---HSEVASLQEKQHTTTNV 390
                +VD I F   +  G ++ +S ++ FT N  +++ V      V    +K++   + 
Sbjct: 239 NIVTASVDAINFHDKIRKGCVITISGRMTFTSNKSMEIEVLVDADPVVDSSQKRYRAASA 298

Query: 391 FHFTFMSEKE------VPLVFPKTYGESMLYLDGQRHFNSM 425
           F FT++S  +      VP + P+T  E   + +G+  +  M
Sbjct: 299 F-FTYVSLSQEGRSLPVPQLVPETEDEKKRFEEGKGRYLQM 338


>gi|75709208 acyl-CoA thioesterase 7 isoform hBACHa [Homo sapiens]
          Length = 370

 Score = 45.8 bits (107), Expect = 8e-05
 Identities = 64/341 (18%), Positives = 132/341 (38%), Gaps = 47/341 (13%)

Query: 100 LREKYLTVQNTVRFGRILEDLDSLGVLICYMHNKIHSAKMSPLSIVTALVDKIDMCKKSL 159
           +R     V   V  G IL+ ++  G +I   H    + +    ++  A V++ D      
Sbjct: 50  MRPDDANVAGNVHGGTILKMIEEAGAIISTRHCNSQNGERCVAAL--ARVERTDFLSPMC 107

Query: 160 SPEQDIKFSGHVSWVGKTSMEVKMQMFQLHGDEFCPVLDATFVMVARDSENKGPAFVNPL 219
             E     S  +++  K S+EV++            V+    +  A+   NK   +  PL
Sbjct: 108 IGEV-AHVSAEITYTSKHSVEVQVN-----------VMSENILTGAKKLTNKATLWYVPL 155

Query: 220 IPESPEEE------ELFRQGELNKGRRIAFSSTSLLKMAPSAEERTTIHEMFLSTLDPKT 273
             ++ ++          RQ +  +GR+  + +  L +M         +  +     +P T
Sbjct: 156 SLKNVDKVLEVPPVVYSRQEQEEEGRK-RYEAQKLERMETKWRNGDIVQPVL--NPEPNT 212

Query: 274 ISFRSRVLPSNAVWMENSKLKSLEICHPQERNIFNRIFGGFLMRKAYELAWATACSFGGS 333
           +S+              S+   + +  P +  +   + GG  M+   E+A   A     +
Sbjct: 213 VSY--------------SQSSLIHLVGPSDCTLHGFVHGGVTMKLMDEVAGIVAARHCKT 258

Query: 334 RPFVVAVDDIMFQKPVEVGSLLFLSSQVCFTQNNYIQVRV---HSEVASLQEKQHTTTNV 390
                +VD I F   +  G ++ +S ++ FT N  +++ V      V    +K++   + 
Sbjct: 259 NIVTASVDAINFHDKIRKGCVITISGRMTFTSNKSMEIEVLVDADPVVDSSQKRYRAASA 318

Query: 391 FHFTFMSEKE------VPLVFPKTYGESMLYLDGQRHFNSM 425
           F FT++S  +      VP + P+T  E   + +G+  +  M
Sbjct: 319 F-FTYVSLSQEGRSLPVPQLVPETEDEKKRFEEGKGRYLQM 358


>gi|62526045 zinc finger protein 638 [Homo sapiens]
          Length = 1978

 Score = 33.9 bits (76), Expect = 0.30
 Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 5/88 (5%)

Query: 225  EEEELFRQGELNKGR--RIAFSSTSLLKMAPSAEERTTIHEMFLSTLDPK---TISFRSR 279
            E  EL  QGE  K     +A +S S+ +   +AEE     +MF S L+ K    I+ ++ 
Sbjct: 1163 ETLELETQGEEVKEEIPLVASASVSIEQFTENAEECALNQQMFNSDLEKKGAEIINPKTA 1222

Query: 280  VLPSNAVWMENSKLKSLEICHPQERNIF 307
            +LPS++V+ E   LK +    P E   F
Sbjct: 1223 LLPSDSVFAEERNLKGILEESPSEAEDF 1250


>gi|21626468 zinc finger protein 638 [Homo sapiens]
          Length = 1978

 Score = 33.9 bits (76), Expect = 0.30
 Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 5/88 (5%)

Query: 225  EEEELFRQGELNKGR--RIAFSSTSLLKMAPSAEERTTIHEMFLSTLDPK---TISFRSR 279
            E  EL  QGE  K     +A +S S+ +   +AEE     +MF S L+ K    I+ ++ 
Sbjct: 1163 ETLELETQGEEVKEEIPLVASASVSIEQFTENAEECALNQQMFNSDLEKKGAEIINPKTA 1222

Query: 280  VLPSNAVWMENSKLKSLEICHPQERNIF 307
            +LPS++V+ E   LK +    P E   F
Sbjct: 1223 LLPSDSVFAEERNLKGILEESPSEAEDF 1250


>gi|46409302 NIPA-like domain containing 1 [Homo sapiens]
          Length = 410

 Score = 30.4 bits (67), Expect = 3.3
 Identities = 15/32 (46%), Positives = 20/32 (62%)

Query: 245 STSLLKMAPSAEERTTIHEMFLSTLDPKTISF 276
           ST ++  AP  EE T++HEM +   DP  ISF
Sbjct: 181 STVMVIHAPQEEEVTSLHEMEMKLRDPGFISF 212


>gi|157738629 kinesin family member 13A isoform d [Homo sapiens]
          Length = 1749

 Score = 29.6 bits (65), Expect = 5.7
 Identities = 37/154 (24%), Positives = 66/154 (42%), Gaps = 8/154 (5%)

Query: 153 DMCKKSLSPEQDIKFSGHVSWVGKTSME-VKMQMFQLHGDEFCPVLDATFVMVARDSENK 211
           D  K++  PE D+  +   S     + E  +M++     +   PV +   V+  +  E K
Sbjct: 554 DFEKETGPPEHDLDAASEASSEPDYNYEFAQMEVIMKTLNSNDPVQNVVQVLEKQYLEEK 613

Query: 212 GPAFVNPLIPESPEEEELF------RQGELNKGRRIAFSS-TSLLKMAPSAEERTTIHEM 264
             A     +    E E+L       RQ + +   R+A+SS T+  K+   AEER  +   
Sbjct: 614 RSALEEQRLMYERELEQLRQQLSPDRQPQSSGPDRLAYSSQTAQQKVTQWAEERDELFRQ 673

Query: 265 FLSTLDPKTISFRSRVLPSNAVWMENSKLKSLEI 298
            L+ L  + +   + V  +N +  E SKL   ++
Sbjct: 674 SLAKLREQLVKANTLVREANFLAEEMSKLTDYQV 707


>gi|157738627 kinesin family member 13A isoform c [Homo sapiens]
          Length = 1757

 Score = 29.6 bits (65), Expect = 5.7
 Identities = 37/154 (24%), Positives = 66/154 (42%), Gaps = 8/154 (5%)

Query: 153 DMCKKSLSPEQDIKFSGHVSWVGKTSME-VKMQMFQLHGDEFCPVLDATFVMVARDSENK 211
           D  K++  PE D+  +   S     + E  +M++     +   PV +   V+  +  E K
Sbjct: 554 DFEKETGPPEHDLDAASEASSEPDYNYEFAQMEVIMKTLNSNDPVQNVVQVLEKQYLEEK 613

Query: 212 GPAFVNPLIPESPEEEELF------RQGELNKGRRIAFSS-TSLLKMAPSAEERTTIHEM 264
             A     +    E E+L       RQ + +   R+A+SS T+  K+   AEER  +   
Sbjct: 614 RSALEEQRLMYERELEQLRQQLSPDRQPQSSGPDRLAYSSQTAQQKVTQWAEERDELFRQ 673

Query: 265 FLSTLDPKTISFRSRVLPSNAVWMENSKLKSLEI 298
            L+ L  + +   + V  +N +  E SKL   ++
Sbjct: 674 SLAKLREQLVKANTLVREANFLAEEMSKLTDYQV 707


>gi|157738625 kinesin family member 13A isoform b [Homo sapiens]
          Length = 1770

 Score = 29.6 bits (65), Expect = 5.7
 Identities = 37/154 (24%), Positives = 66/154 (42%), Gaps = 8/154 (5%)

Query: 153 DMCKKSLSPEQDIKFSGHVSWVGKTSME-VKMQMFQLHGDEFCPVLDATFVMVARDSENK 211
           D  K++  PE D+  +   S     + E  +M++     +   PV +   V+  +  E K
Sbjct: 554 DFEKETGPPEHDLDAASEASSEPDYNYEFAQMEVIMKTLNSNDPVQNVVQVLEKQYLEEK 613

Query: 212 GPAFVNPLIPESPEEEELF------RQGELNKGRRIAFSS-TSLLKMAPSAEERTTIHEM 264
             A     +    E E+L       RQ + +   R+A+SS T+  K+   AEER  +   
Sbjct: 614 RSALEEQRLMYERELEQLRQQLSPDRQPQSSGPDRLAYSSQTAQQKVTQWAEERDELFRQ 673

Query: 265 FLSTLDPKTISFRSRVLPSNAVWMENSKLKSLEI 298
            L+ L  + +   + V  +N +  E SKL   ++
Sbjct: 674 SLAKLREQLVKANTLVREANFLAEEMSKLTDYQV 707


>gi|157738621 kinesin family member 13A isoform a [Homo sapiens]
          Length = 1805

 Score = 29.6 bits (65), Expect = 5.7
 Identities = 37/154 (24%), Positives = 66/154 (42%), Gaps = 8/154 (5%)

Query: 153 DMCKKSLSPEQDIKFSGHVSWVGKTSME-VKMQMFQLHGDEFCPVLDATFVMVARDSENK 211
           D  K++  PE D+  +   S     + E  +M++     +   PV +   V+  +  E K
Sbjct: 554 DFEKETGPPEHDLDAASEASSEPDYNYEFAQMEVIMKTLNSNDPVQNVVQVLEKQYLEEK 613

Query: 212 GPAFVNPLIPESPEEEELF------RQGELNKGRRIAFSS-TSLLKMAPSAEERTTIHEM 264
             A     +    E E+L       RQ + +   R+A+SS T+  K+   AEER  +   
Sbjct: 614 RSALEEQRLMYERELEQLRQQLSPDRQPQSSGPDRLAYSSQTAQQKVTQWAEERDELFRQ 673

Query: 265 FLSTLDPKTISFRSRVLPSNAVWMENSKLKSLEI 298
            L+ L  + +   + V  +N +  E SKL   ++
Sbjct: 674 SLAKLREQLVKANTLVREANFLAEEMSKLTDYQV 707


>gi|39995078 hypothetical protein LOC60684 isoform b [Homo sapiens]
          Length = 1086

 Score = 29.3 bits (64), Expect = 7.4
 Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 17/67 (25%)

Query: 127 ICYMHNKIHSAKMSPLSIVTALVDKIDMCKKSLSPEQDIKFSGHVSWVGKTSMEVKMQMF 186
           +C+ HN       +PL  +      ID+CKK +    ++ F  H +W+ K         F
Sbjct: 281 LCFQHN-------TPLDAIAQFRKHIDLCKKKIG-SAELSFE-HDAWMSK--------QF 323

Query: 187 QLHGDEF 193
           Q  GD F
Sbjct: 324 QAFGDLF 330


>gi|39995076 hypothetical protein LOC60684 isoform a [Homo sapiens]
          Length = 1133

 Score = 29.3 bits (64), Expect = 7.4
 Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 17/67 (25%)

Query: 127 ICYMHNKIHSAKMSPLSIVTALVDKIDMCKKSLSPEQDIKFSGHVSWVGKTSMEVKMQMF 186
           +C+ HN       +PL  +      ID+CKK +    ++ F  H +W+ K         F
Sbjct: 281 LCFQHN-------TPLDAIAQFRKHIDLCKKKIG-SAELSFE-HDAWMSK--------QF 323

Query: 187 QLHGDEF 193
           Q  GD F
Sbjct: 324 QAFGDLF 330


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.135    0.399 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,931,565
Number of Sequences: 37866
Number of extensions: 731012
Number of successful extensions: 1609
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 1598
Number of HSP's gapped (non-prelim): 18
length of query: 439
length of database: 18,247,518
effective HSP length: 105
effective length of query: 334
effective length of database: 14,271,588
effective search space: 4766710392
effective search space used: 4766710392
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.