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Search of human proteins with 7705393
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|7705393 hydroxyacid oxidase 2 [Homo sapiens]
(351 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|54234014 hydroxyacid oxidase 2 [Homo sapiens] 702 0.0
gi|7705393 hydroxyacid oxidase 2 [Homo sapiens] 702 0.0
gi|11068137 hydroxyacid oxidase 1 [Homo sapiens] 336 2e-92
gi|156616279 inosine monophosphate dehydrogenase 1 isoform c [Ho... 33 0.38
gi|34328928 inosine monophosphate dehydrogenase 1 isoform b [Hom... 33 0.38
gi|34328930 inosine monophosphate dehydrogenase 1 isoform a [Hom... 33 0.38
gi|217035152 inosine monophosphate dehydrogenase 1 isoform d [Ho... 33 0.38
gi|217035150 inosine monophosphate dehydrogenase 1 isoform g [Ho... 33 0.38
gi|217035148 inosine monophosphate dehydrogenase 1 isoform f [Ho... 33 0.38
gi|217035146 inosine monophosphate dehydrogenase 1 isoform e [Ho... 33 0.38
gi|45006951 dihydroorotate dehydrogenase precursor [Homo sapiens] 33 0.50
gi|66933016 inosine monophosphate dehydrogenase 2 [Homo sapiens] 30 2.5
>gi|54234014 hydroxyacid oxidase 2 [Homo sapiens]
Length = 351
Score = 702 bits (1811), Expect = 0.0
Identities = 351/351 (100%), Positives = 351/351 (100%)
Query: 1 MSLVCLTDFQAHAREQLSKSTRDFIEGGADDSITRDDNIAAFKRIRLRPRYLRDVSEVDT 60
MSLVCLTDFQAHAREQLSKSTRDFIEGGADDSITRDDNIAAFKRIRLRPRYLRDVSEVDT
Sbjct: 1 MSLVCLTDFQAHAREQLSKSTRDFIEGGADDSITRDDNIAAFKRIRLRPRYLRDVSEVDT 60
Query: 61 RTTIQGEEISAPICIAPTGFHCLVWPDGEMSTARAAQAAGICYITSTFASCSLEDIVIAA 120
RTTIQGEEISAPICIAPTGFHCLVWPDGEMSTARAAQAAGICYITSTFASCSLEDIVIAA
Sbjct: 61 RTTIQGEEISAPICIAPTGFHCLVWPDGEMSTARAAQAAGICYITSTFASCSLEDIVIAA 120
Query: 121 PEGLRWFQLYVHPDLQLNKQLIQRVESLGFKALVITLDTPVCGNRRHDIRNQLRRNLTLT 180
PEGLRWFQLYVHPDLQLNKQLIQRVESLGFKALVITLDTPVCGNRRHDIRNQLRRNLTLT
Sbjct: 121 PEGLRWFQLYVHPDLQLNKQLIQRVESLGFKALVITLDTPVCGNRRHDIRNQLRRNLTLT 180
Query: 181 DLQSPKKGNAIPYFQMTPISTSLCWNDLSWFQSITRLPIILKGILTKEDAELAVKHNVQG 240
DLQSPKKGNAIPYFQMTPISTSLCWNDLSWFQSITRLPIILKGILTKEDAELAVKHNVQG
Sbjct: 181 DLQSPKKGNAIPYFQMTPISTSLCWNDLSWFQSITRLPIILKGILTKEDAELAVKHNVQG 240
Query: 241 IIVSNHGGRQLDEVLASIDALTEVVAAVKGKIEVYLDGGVRTGNDVLKALALGAKCIFLG 300
IIVSNHGGRQLDEVLASIDALTEVVAAVKGKIEVYLDGGVRTGNDVLKALALGAKCIFLG
Sbjct: 241 IIVSNHGGRQLDEVLASIDALTEVVAAVKGKIEVYLDGGVRTGNDVLKALALGAKCIFLG 300
Query: 301 RPILWGLACKGEHGVKEVLNILTNEFHTSMALTGCRSVAEINRNLVQFSRL 351
RPILWGLACKGEHGVKEVLNILTNEFHTSMALTGCRSVAEINRNLVQFSRL
Sbjct: 301 RPILWGLACKGEHGVKEVLNILTNEFHTSMALTGCRSVAEINRNLVQFSRL 351
>gi|7705393 hydroxyacid oxidase 2 [Homo sapiens]
Length = 351
Score = 702 bits (1811), Expect = 0.0
Identities = 351/351 (100%), Positives = 351/351 (100%)
Query: 1 MSLVCLTDFQAHAREQLSKSTRDFIEGGADDSITRDDNIAAFKRIRLRPRYLRDVSEVDT 60
MSLVCLTDFQAHAREQLSKSTRDFIEGGADDSITRDDNIAAFKRIRLRPRYLRDVSEVDT
Sbjct: 1 MSLVCLTDFQAHAREQLSKSTRDFIEGGADDSITRDDNIAAFKRIRLRPRYLRDVSEVDT 60
Query: 61 RTTIQGEEISAPICIAPTGFHCLVWPDGEMSTARAAQAAGICYITSTFASCSLEDIVIAA 120
RTTIQGEEISAPICIAPTGFHCLVWPDGEMSTARAAQAAGICYITSTFASCSLEDIVIAA
Sbjct: 61 RTTIQGEEISAPICIAPTGFHCLVWPDGEMSTARAAQAAGICYITSTFASCSLEDIVIAA 120
Query: 121 PEGLRWFQLYVHPDLQLNKQLIQRVESLGFKALVITLDTPVCGNRRHDIRNQLRRNLTLT 180
PEGLRWFQLYVHPDLQLNKQLIQRVESLGFKALVITLDTPVCGNRRHDIRNQLRRNLTLT
Sbjct: 121 PEGLRWFQLYVHPDLQLNKQLIQRVESLGFKALVITLDTPVCGNRRHDIRNQLRRNLTLT 180
Query: 181 DLQSPKKGNAIPYFQMTPISTSLCWNDLSWFQSITRLPIILKGILTKEDAELAVKHNVQG 240
DLQSPKKGNAIPYFQMTPISTSLCWNDLSWFQSITRLPIILKGILTKEDAELAVKHNVQG
Sbjct: 181 DLQSPKKGNAIPYFQMTPISTSLCWNDLSWFQSITRLPIILKGILTKEDAELAVKHNVQG 240
Query: 241 IIVSNHGGRQLDEVLASIDALTEVVAAVKGKIEVYLDGGVRTGNDVLKALALGAKCIFLG 300
IIVSNHGGRQLDEVLASIDALTEVVAAVKGKIEVYLDGGVRTGNDVLKALALGAKCIFLG
Sbjct: 241 IIVSNHGGRQLDEVLASIDALTEVVAAVKGKIEVYLDGGVRTGNDVLKALALGAKCIFLG 300
Query: 301 RPILWGLACKGEHGVKEVLNILTNEFHTSMALTGCRSVAEINRNLVQFSRL 351
RPILWGLACKGEHGVKEVLNILTNEFHTSMALTGCRSVAEINRNLVQFSRL
Sbjct: 301 RPILWGLACKGEHGVKEVLNILTNEFHTSMALTGCRSVAEINRNLVQFSRL 351
>gi|11068137 hydroxyacid oxidase 1 [Homo sapiens]
Length = 370
Score = 336 bits (862), Expect = 2e-92
Identities = 166/357 (46%), Positives = 241/357 (67%), Gaps = 12/357 (3%)
Query: 3 LVCLTDFQAHAREQLSKSTRDFIEGGADDSITRDDNIAAFKRIRLRPRYLRDVSEVDTRT 62
L+C+ D++ HA+ L KS D+ GA+D T DNIAAF R +L PR LR+V+E D T
Sbjct: 5 LICINDYEQHAKSVLPKSIYDYYRSGANDEETLADNIAAFSRWKLYPRMLRNVAETDLST 64
Query: 63 TIQGEEISAPICIAPTGFHCLVWPDGEMSTARAAQAAGICYITSTFASCSLEDIVIAAPE 122
++ G+ +S PIC+ T + DGE++T RA Q+ G + S++A+ S+E++ A PE
Sbjct: 65 SVLGQRVSMPICVGATAMQRMAHVDGELATVRACQSLGTGMMLSSWATSSIEEVAEAGPE 124
Query: 123 GLRWFQLYVHPDLQLNKQLIQRVESLGFKALVITLDTPVCGNRRHDIRNQLR-------R 175
LRW QLY++ D ++ K+L+++ E +G+KA+ +T+DTP GNR D+RN+ + +
Sbjct: 125 ALRWLQLYIYKDREVTKKLVRQAEKMGYKAIFVTVDTPYLGNRLDDVRNRFKLPPQLRMK 184
Query: 176 NLTLTDLQ-SPKKG----NAIPYFQMTPISTSLCWNDLSWFQSITRLPIILKGILTKEDA 230
N + L SP++ + + + I S+ W D+ W + +T LPI+ KGIL +DA
Sbjct: 185 NFETSTLSFSPEENFGDDSGLAAYVAKAIDPSISWEDIKWLRRLTSLPIVAKGILRGDDA 244
Query: 231 ELAVKHNVQGIIVSNHGGRQLDEVLASIDALTEVVAAVKGKIEVYLDGGVRTGNDVLKAL 290
AVKH + GI+VSNHG RQLD V A+ID L E+V AV+GK+EV+LDGGVR G DVLKAL
Sbjct: 245 REAVKHGLNGILVSNHGARQLDGVPATIDVLPEIVEAVEGKVEVFLDGGVRKGTDVLKAL 304
Query: 291 ALGAKCIFLGRPILWGLACKGEHGVKEVLNILTNEFHTSMALTGCRSVAEINRNLVQ 347
ALGAK +F+GRPI+WGLA +GE GV++VL IL EF +MAL+GC++V I++ LV+
Sbjct: 305 ALGAKAVFVGRPIVWGLAFQGEKGVQDVLEILKEEFRLAMALSGCQNVKVIDKTLVR 361
>gi|156616279 inosine monophosphate dehydrogenase 1 isoform c [Homo
sapiens]
Length = 589
Score = 33.1 bits (74), Expect = 0.38
Identities = 15/42 (35%), Positives = 24/42 (57%)
Query: 272 IEVYLDGGVRTGNDVLKALALGAKCIFLGRPILWGLACKGEH 313
+ + DGG++T V+KALALGA + +G + GE+
Sbjct: 434 VPIIADGGIQTVGHVVKALALGASTVMMGSLLAATTEAPGEY 475
>gi|34328928 inosine monophosphate dehydrogenase 1 isoform b [Homo
sapiens]
Length = 563
Score = 33.1 bits (74), Expect = 0.38
Identities = 15/42 (35%), Positives = 24/42 (57%)
Query: 272 IEVYLDGGVRTGNDVLKALALGAKCIFLGRPILWGLACKGEH 313
+ + DGG++T V+KALALGA + +G + GE+
Sbjct: 408 VPIIADGGIQTVGHVVKALALGASTVMMGSLLAATTEAPGEY 449
>gi|34328930 inosine monophosphate dehydrogenase 1 isoform a [Homo
sapiens]
Length = 599
Score = 33.1 bits (74), Expect = 0.38
Identities = 15/42 (35%), Positives = 24/42 (57%)
Query: 272 IEVYLDGGVRTGNDVLKALALGAKCIFLGRPILWGLACKGEH 313
+ + DGG++T V+KALALGA + +G + GE+
Sbjct: 444 VPIIADGGIQTVGHVVKALALGASTVMMGSLLAATTEAPGEY 485
>gi|217035152 inosine monophosphate dehydrogenase 1 isoform d [Homo
sapiens]
Length = 566
Score = 33.1 bits (74), Expect = 0.38
Identities = 15/42 (35%), Positives = 24/42 (57%)
Query: 272 IEVYLDGGVRTGNDVLKALALGAKCIFLGRPILWGLACKGEH 313
+ + DGG++T V+KALALGA + +G + GE+
Sbjct: 411 VPIIADGGIQTVGHVVKALALGASTVMMGSLLAATTEAPGEY 452
>gi|217035150 inosine monophosphate dehydrogenase 1 isoform g [Homo
sapiens]
Length = 489
Score = 33.1 bits (74), Expect = 0.38
Identities = 15/42 (35%), Positives = 24/42 (57%)
Query: 272 IEVYLDGGVRTGNDVLKALALGAKCIFLGRPILWGLACKGEH 313
+ + DGG++T V+KALALGA + +G + GE+
Sbjct: 334 VPIIADGGIQTVGHVVKALALGASTVMMGSLLAATTEAPGEY 375
>gi|217035148 inosine monophosphate dehydrogenase 1 isoform f [Homo
sapiens]
Length = 509
Score = 33.1 bits (74), Expect = 0.38
Identities = 15/42 (35%), Positives = 24/42 (57%)
Query: 272 IEVYLDGGVRTGNDVLKALALGAKCIFLGRPILWGLACKGEH 313
+ + DGG++T V+KALALGA + +G + GE+
Sbjct: 354 VPIIADGGIQTVGHVVKALALGASTVMMGSLLAATTEAPGEY 395
>gi|217035146 inosine monophosphate dehydrogenase 1 isoform e [Homo
sapiens]
Length = 514
Score = 33.1 bits (74), Expect = 0.38
Identities = 15/42 (35%), Positives = 24/42 (57%)
Query: 272 IEVYLDGGVRTGNDVLKALALGAKCIFLGRPILWGLACKGEH 313
+ + DGG++T V+KALALGA + +G + GE+
Sbjct: 359 VPIIADGGIQTVGHVVKALALGASTVMMGSLLAATTEAPGEY 400
>gi|45006951 dihydroorotate dehydrogenase precursor [Homo sapiens]
Length = 395
Score = 32.7 bits (73), Expect = 0.50
Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 8/92 (8%)
Query: 238 VQGIIVSNHGG---RQLDEVLASIDALTEVVAAVKGKIEVYLDGGVRTGNDVLKALALGA 294
+QG + S GG + L ++ S + E+ A +G++ + GGV +G D L+ + GA
Sbjct: 292 LQGALRSETGGLSGKPLRDL--STQTIREMYALTQGRVPIIGVGGVSSGQDALEKIRAGA 349
Query: 295 KCIFLGRPI-LWGLACKGEHGVKEVLNILTNE 325
+ L + WG G+ VK L L E
Sbjct: 350 SLVQLYTALTFWGPPVVGK--VKRELEALLKE 379
>gi|66933016 inosine monophosphate dehydrogenase 2 [Homo sapiens]
Length = 514
Score = 30.4 bits (67), Expect = 2.5
Identities = 14/42 (33%), Positives = 22/42 (52%)
Query: 272 IEVYLDGGVRTGNDVLKALALGAKCIFLGRPILWGLACKGEH 313
+ V DGG++ + KALALGA + +G + GE+
Sbjct: 359 VPVIADGGIQNVGHIAKALALGASTVMMGSLLAATTEAPGEY 400
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.137 0.411
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,116,463
Number of Sequences: 37866
Number of extensions: 498655
Number of successful extensions: 1072
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1059
Number of HSP's gapped (non-prelim): 12
length of query: 351
length of database: 18,247,518
effective HSP length: 103
effective length of query: 248
effective length of database: 14,347,320
effective search space: 3558135360
effective search space used: 3558135360
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.