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Search of human proteins with 7662150
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|7662150 hypothetical protein LOC9917 [Homo sapiens]
(409 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|7662150 hypothetical protein LOC9917 [Homo sapiens] 837 0.0
gi|116174742 family with sequence similarity 20, member C [Homo ... 274 1e-73
gi|241896898 family with sequence similarity 20, member A [Homo ... 234 8e-62
gi|4505451 neuroblastoma RAS viral (v-ras) oncogene homolog [Hom... 32 1.0
gi|15718763 c-K-ras2 protein isoform a precursor [Homo sapiens] 30 4.0
gi|15718761 c-K-ras2 protein isoform b precursor [Homo sapiens] 30 4.0
gi|194363762 v-Ha-ras Harvey rat sarcoma viral oncogene homolog ... 30 4.0
gi|34222246 v-Ha-ras Harvey rat sarcoma viral oncogene homolog i... 30 4.0
gi|4885425 v-Ha-ras Harvey rat sarcoma viral oncogene homolog is... 30 4.0
gi|4502897 cleft lip and palate associated transmembrane protein... 30 4.0
gi|38201690 RAP2B, member of RAS oncogene family [Homo sapiens] 29 8.8
gi|10518344 RAP2A, member of RAS oncogene family [Homo sapiens] 29 8.8
gi|32129209 RAP2C, member of RAS oncogene family [Homo sapiens] 29 8.8
>gi|7662150 hypothetical protein LOC9917 [Homo sapiens]
Length = 409
Score = 837 bits (2161), Expect = 0.0
Identities = 409/409 (100%), Positives = 409/409 (100%)
Query: 1 MKLKQRVVLLAILLVIFIFTKVFLIDNLDTSAANREDQRAFHRMMTGLRVELAPKLDHTL 60
MKLKQRVVLLAILLVIFIFTKVFLIDNLDTSAANREDQRAFHRMMTGLRVELAPKLDHTL
Sbjct: 1 MKLKQRVVLLAILLVIFIFTKVFLIDNLDTSAANREDQRAFHRMMTGLRVELAPKLDHTL 60
Query: 61 QSPWEIAAQWVVPREVYPEETPELGAVMHAMATKKIIKADVGYKGTQLKALLILEGGQKV 120
QSPWEIAAQWVVPREVYPEETPELGAVMHAMATKKIIKADVGYKGTQLKALLILEGGQKV
Sbjct: 61 QSPWEIAAQWVVPREVYPEETPELGAVMHAMATKKIIKADVGYKGTQLKALLILEGGQKV 120
Query: 121 VFKPKRYSRDHVVEGEPYAGYDRHNAEVAAFHLDRILGFHRAPLVVGRFVNLRTEIKPVA 180
VFKPKRYSRDHVVEGEPYAGYDRHNAEVAAFHLDRILGFHRAPLVVGRFVNLRTEIKPVA
Sbjct: 121 VFKPKRYSRDHVVEGEPYAGYDRHNAEVAAFHLDRILGFHRAPLVVGRFVNLRTEIKPVA 180
Query: 181 TEQLLSTFLTVGNNTCFYGKCYYCRETEPACADGDIMEGSVTLWLPDVWPLQKHRHPWGR 240
TEQLLSTFLTVGNNTCFYGKCYYCRETEPACADGDIMEGSVTLWLPDVWPLQKHRHPWGR
Sbjct: 181 TEQLLSTFLTVGNNTCFYGKCYYCRETEPACADGDIMEGSVTLWLPDVWPLQKHRHPWGR 240
Query: 241 TYREGKLARWEYDESYCDAVKKTSPYDSGPRLLDIIDTAVFDYLIGNADRHHYESFQDDE 300
TYREGKLARWEYDESYCDAVKKTSPYDSGPRLLDIIDTAVFDYLIGNADRHHYESFQDDE
Sbjct: 241 TYREGKLARWEYDESYCDAVKKTSPYDSGPRLLDIIDTAVFDYLIGNADRHHYESFQDDE 300
Query: 301 GASMLILLDNAKSFGNPSLDERSILAPLYQCCIIRVSTWNRLNYLKNGVLKSALKSAMAH 360
GASMLILLDNAKSFGNPSLDERSILAPLYQCCIIRVSTWNRLNYLKNGVLKSALKSAMAH
Sbjct: 301 GASMLILLDNAKSFGNPSLDERSILAPLYQCCIIRVSTWNRLNYLKNGVLKSALKSAMAH 360
Query: 361 DPISPVLSDPHLDAVDQRLLSVLATVKQCTDQFGMDTVLVEDRMPLSHL 409
DPISPVLSDPHLDAVDQRLLSVLATVKQCTDQFGMDTVLVEDRMPLSHL
Sbjct: 361 DPISPVLSDPHLDAVDQRLLSVLATVKQCTDQFGMDTVLVEDRMPLSHL 409
>gi|116174742 family with sequence similarity 20, member C [Homo
sapiens]
Length = 584
Score = 274 bits (700), Expect = 1e-73
Identities = 141/337 (41%), Positives = 209/337 (62%), Gaps = 9/337 (2%)
Query: 75 EVYPEETPELGAVMHAMATKKIIKADVGYKGTQLKALLILEGGQKVVFKPKRYSRDHVVE 134
E+Y P + A++H +++++I + GTQLK ++ + + +FKP + +R+
Sbjct: 237 ELYSRHNPAIEALLHDLSSQRITSVAMKSGGTQLKLIMTFQNYGQALFKPMKQTREQETP 296
Query: 135 GE--PYAGYDRHNAEVAAFHLDRILGFHRAPLVVGRFVNLRTEIKPVATEQLL--STFLT 190
+ ++ Y+RHNAE+AAFHLDRIL F R P V GR VN+ EI+ V ++ L + F++
Sbjct: 297 PDFFYFSDYERHNAEIAAFHLDRILDFRRVPPVAGRMVNMTKEIRDVTRDKKLWRTFFIS 356
Query: 191 VGNNTCFYGKC-YYCRETEPACADGDIMEGSVTLWLPDVWPLQKH--RHPWGRTYREGKL 247
NN CFYG+C YYC C D +EGS+ +LPD+ ++ R+PW R+Y + K
Sbjct: 357 PANNICFYGECSYYCSTEHALCGKPDQIEGSLAAFLPDLSLAKRKTWRNPWRRSYHKRKK 416
Query: 248 ARWEYDESYCDAVKKTSPYDSGPRLLDIIDTAVFDYLIGNADRHHYESFQDDEGASMLIL 307
A WE D YC+ VK+T PYDS R+LD++D +FD+L+GN DRHHYE+F+ + +I
Sbjct: 417 AEWEVDPDYCEEVKQTPPYDSSHRILDVMDMTIFDFLMGNMDRHHYETFEKFGNETFIIH 476
Query: 308 LDNAKSFGNPSLDERSILAPLYQCCIIRVSTWNRLNYLKNGVLKSALKSA--MAHDPISP 365
LDN + FG S DE SIL PL QCC IR ST+ RL L K +L A + D ++P
Sbjct: 477 LDNGRGFGKYSHDELSILVPLQQCCRIRKSTYLRLQLLAKEEYKLSLLMAESLRGDQVAP 536
Query: 366 VLSDPHLDAVDQRLLSVLATVKQCTDQFGMDTVLVED 402
VL PHL+A+D+RL VL V+ C ++ G+ +V+ +D
Sbjct: 537 VLYQPHLEALDRRLRVVLKAVRDCVERNGLHSVVDDD 573
>gi|241896898 family with sequence similarity 20, member A [Homo
sapiens]
Length = 541
Score = 234 bits (598), Expect = 8e-62
Identities = 142/376 (37%), Positives = 202/376 (53%), Gaps = 26/376 (6%)
Query: 52 LAPKLDHTLQSPWEIAAQWVVPREVYPEETPELGAVMHAMATKKIIKAD----------- 100
L P L L++ W + +Y +P + ++ M I AD
Sbjct: 149 LDPPLQLRLEASWVQFHLGINRHGLYSRSSPVVSKLLQDMRHFPTISADYSQDEKALLGA 208
Query: 101 ------VGYKGTQLKALLILEGGQKVVFKPKRYSRDHV--VEGEPYAGYDRHNAEVAAFH 152
V G LK +L K +FKP R RD V+ + + RHNAE+AAFH
Sbjct: 209 CDCTQIVKPSGVHLKLVLRFSDFGKAMFKPMRQQRDEETPVDFFYFIDFQRHNAEIAAFH 268
Query: 153 LDRILGFHRAPLVVGRFVNLRTEIKPVATEQLLST--FLTVGNNTCFYGKCYYCRETEPA 210
LDRIL F R P VGR VN+ EI V ++L + F++ +N CF+ KC Y +TE A
Sbjct: 269 LDRILDFRRVPPTVGRIVNVTKEILEVTKNEILQSVFFVSPASNVCFFAKCPYMCKTEYA 328
Query: 211 -CADGDIMEGSVTLWLP--DVWPLQKHRHPWGRTYREGKLARWEYDESYCDAVKKTSPYD 267
C + ++EGS++ +LP ++ P +PW R+Y WE + YCD VK+ PY+
Sbjct: 329 VCGNPHLLEGSLSAFLPSLNLAPRLSVPNPWIRSYTLAGKEEWEVNPLYCDTVKQIYPYN 388
Query: 268 SGPRLLDIIDTAVFDYLIGNADRHHYESFQDDEGASMLILLDNAKSFGNPSLDERSILAP 327
+ RLL++ID A+FD+LIGN DRHHYE F LI LDNA+ FG S DE SIL+P
Sbjct: 389 NSQRLLNVIDMAIFDFLIGNMDRHHYEMFTKFGDDGFLIHLDNARGFGRHSHDEISILSP 448
Query: 328 LYQCCIIRVSTWNRLNYLKNG--VLKSALKSAMAHDPISPVLSDPHLDAVDQRLLSVLAT 385
L QCC+I+ T L L L ++ ++ D +SPVL++PHL A+D+RL ++L T
Sbjct: 449 LSQCCMIKKKTLLHLQLLAQADYRLSDVMRESLLEDQLSPVLTEPHLLALDRRLQTILRT 508
Query: 386 VKQCTDQFGMDTVLVE 401
V+ C G +V+V+
Sbjct: 509 VEGCIVAHGQQSVIVD 524
>gi|4505451 neuroblastoma RAS viral (v-ras) oncogene homolog [Homo
sapiens]
Length = 189
Score = 32.0 bits (71), Expect = 1.0
Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 4/74 (5%)
Query: 251 EYDESYCDAVKKTSPYDSGPRLLDIIDTAVFDYLIGNADRHHYESFQDDEGASMLILLDN 310
EYD + D+ +K D LLDI+DTA + D++ + EG + ++N
Sbjct: 31 EYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQY----MRTGEGFLCVFAINN 86
Query: 311 AKSFGNPSLDERSI 324
+KSF + +L I
Sbjct: 87 SKSFADINLYREQI 100
>gi|15718763 c-K-ras2 protein isoform a precursor [Homo sapiens]
Length = 189
Score = 30.0 bits (66), Expect = 4.0
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
Query: 251 EYDESYCDAVKKTSPYDSGPRLLDIIDTAVFDYLIGNADRHHYESFQDDEGASMLILLDN 310
EYD + D+ +K D LLDI+DTA + D++ + EG + ++N
Sbjct: 31 EYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQY----MRTGEGFLCVFAINN 86
Query: 311 AKSF 314
KSF
Sbjct: 87 TKSF 90
>gi|15718761 c-K-ras2 protein isoform b precursor [Homo sapiens]
Length = 188
Score = 30.0 bits (66), Expect = 4.0
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
Query: 251 EYDESYCDAVKKTSPYDSGPRLLDIIDTAVFDYLIGNADRHHYESFQDDEGASMLILLDN 310
EYD + D+ +K D LLDI+DTA + D++ + EG + ++N
Sbjct: 31 EYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQY----MRTGEGFLCVFAINN 86
Query: 311 AKSF 314
KSF
Sbjct: 87 TKSF 90
>gi|194363762 v-Ha-ras Harvey rat sarcoma viral oncogene homolog
isoform 1 [Homo sapiens]
Length = 189
Score = 30.0 bits (66), Expect = 4.0
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
Query: 251 EYDESYCDAVKKTSPYDSGPRLLDIIDTAVFDYLIGNADRHHYESFQDDEGASMLILLDN 310
EYD + D+ +K D LLDI+DTA + D++ + EG + ++N
Sbjct: 31 EYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQY----MRTGEGFLCVFAINN 86
Query: 311 AKSF 314
KSF
Sbjct: 87 TKSF 90
>gi|34222246 v-Ha-ras Harvey rat sarcoma viral oncogene homolog
isoform 2 [Homo sapiens]
Length = 170
Score = 30.0 bits (66), Expect = 4.0
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
Query: 251 EYDESYCDAVKKTSPYDSGPRLLDIIDTAVFDYLIGNADRHHYESFQDDEGASMLILLDN 310
EYD + D+ +K D LLDI+DTA + D++ + EG + ++N
Sbjct: 31 EYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQY----MRTGEGFLCVFAINN 86
Query: 311 AKSF 314
KSF
Sbjct: 87 TKSF 90
>gi|4885425 v-Ha-ras Harvey rat sarcoma viral oncogene homolog
isoform 1 [Homo sapiens]
Length = 189
Score = 30.0 bits (66), Expect = 4.0
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
Query: 251 EYDESYCDAVKKTSPYDSGPRLLDIIDTAVFDYLIGNADRHHYESFQDDEGASMLILLDN 310
EYD + D+ +K D LLDI+DTA + D++ + EG + ++N
Sbjct: 31 EYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQY----MRTGEGFLCVFAINN 86
Query: 311 AKSF 314
KSF
Sbjct: 87 TKSF 90
>gi|4502897 cleft lip and palate associated transmembrane protein 1
[Homo sapiens]
Length = 669
Score = 30.0 bits (66), Expect = 4.0
Identities = 27/108 (25%), Positives = 45/108 (41%), Gaps = 14/108 (12%)
Query: 221 VTLWLPDVWPLQKHRHPWGRTYREGKLARWEYDESYCDAVKKTSPYDSGPRLLDIIDTAV 280
++LW ++ Q + PW E E +S A+ +T+PY ++ I +V
Sbjct: 310 LSLWRWQLYAAQSTKSPWNFLGDELYEQSDEEQDSVKVALLETNPYLLALTIIVSIVHSV 369
Query: 281 FDYLIGNADRHHYESFQDDEGAS--------------MLILLDNAKSF 314
F++L D + S Q EG S +L +LDN +F
Sbjct: 370 FEFLAFKNDIQFWNSRQSLEGLSVRSVFFGVFQSFVVLLYILDNETNF 417
>gi|38201690 RAP2B, member of RAS oncogene family [Homo sapiens]
Length = 183
Score = 28.9 bits (63), Expect = 8.8
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Query: 251 EYDESYCDAVKKTSPYDSGPRLLDIIDTAVFDYLIGNADRHHYESFQDDEGASMLILLDN 310
+YD + D +K DS P +L+I+DTA + D + ++ +G ++ L N
Sbjct: 31 KYDPTIEDFYRKEIEVDSSPSVLEILDTAGTEQFASMRDLY----IKNGQGFILVYSLVN 86
Query: 311 AKSF 314
+SF
Sbjct: 87 QQSF 90
>gi|10518344 RAP2A, member of RAS oncogene family [Homo sapiens]
Length = 183
Score = 28.9 bits (63), Expect = 8.8
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Query: 251 EYDESYCDAVKKTSPYDSGPRLLDIIDTAVFDYLIGNADRHHYESFQDDEGASMLILLDN 310
+YD + D +K DS P +L+I+DTA + D + ++ +G ++ L N
Sbjct: 31 KYDPTIEDFYRKEIEVDSSPSVLEILDTAGTEQFASMRDLY----IKNGQGFILVYSLVN 86
Query: 311 AKSF 314
+SF
Sbjct: 87 QQSF 90
>gi|32129209 RAP2C, member of RAS oncogene family [Homo sapiens]
Length = 183
Score = 28.9 bits (63), Expect = 8.8
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Query: 251 EYDESYCDAVKKTSPYDSGPRLLDIIDTAVFDYLIGNADRHHYESFQDDEGASMLILLDN 310
+YD + D +K DS P +L+I+DTA + D + ++ +G ++ L N
Sbjct: 31 KYDPTIEDFYRKEIEVDSSPSVLEILDTAGTEQFASMRDLY----IKNGQGFILVYSLVN 86
Query: 311 AKSF 314
+SF
Sbjct: 87 QQSF 90
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.138 0.424
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,994,010
Number of Sequences: 37866
Number of extensions: 645406
Number of successful extensions: 1184
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 1171
Number of HSP's gapped (non-prelim): 13
length of query: 409
length of database: 18,247,518
effective HSP length: 105
effective length of query: 304
effective length of database: 14,271,588
effective search space: 4338562752
effective search space used: 4338562752
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.