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Search of human proteins with 7019333
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|7019333 nuclear receptor binding protein [Homo sapiens]
(535 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|7019333 nuclear receptor binding protein [Homo sapiens] 1067 0.0
gi|30794272 nuclear receptor binding protein 2 [Homo sapiens] 264 2e-70
gi|50845418 WNK lysine deficient protein kinase 3 isoform 1 [Hom... 153 4e-37
gi|50845416 WNK lysine deficient protein kinase 3 isoform 2 [Hom... 153 4e-37
gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens] 151 1e-36
gi|34365793 WNK lysine deficient protein kinase 4 [Homo sapiens] 145 1e-34
gi|148612809 WNK lysine deficient protein kinase 1 [Homo sapiens] 144 2e-34
gi|191252782 p21-activated kinase 6 [Homo sapiens] 71 2e-12
gi|191252780 p21-activated kinase 6 [Homo sapiens] 71 2e-12
gi|9910476 p21-activated kinase 6 [Homo sapiens] 71 2e-12
gi|19424132 NIMA-related kinase 7 [Homo sapiens] 69 1e-11
gi|42794769 p21-activated kinase 1 isoform 2 [Homo sapiens] 68 2e-11
gi|190886457 p21-activated kinase 1 isoform 1 [Homo sapiens] 66 9e-11
gi|189491759 p21-activated kinase 3 isoform d [Homo sapiens] 65 1e-10
gi|189491757 p21-activated kinase 3 isoform c [Homo sapiens] 65 1e-10
gi|189491755 p21-activated kinase 3 isoform b [Homo sapiens] 65 1e-10
gi|189491753 p21-activated kinase 3 isoform a [Homo sapiens] 65 1e-10
gi|189491751 p21-activated kinase 3 isoform a [Homo sapiens] 65 1e-10
gi|4505601 p21-activated kinase 3 isoform a [Homo sapiens] 65 1e-10
gi|222136641 NIMA-related kinase 9 [Homo sapiens] 65 1e-10
gi|38327572 serine/threonine protein kinase 6 [Homo sapiens] 65 2e-10
gi|38327570 serine/threonine protein kinase 6 [Homo sapiens] 65 2e-10
gi|38327568 serine/threonine protein kinase 6 [Homo sapiens] 65 2e-10
gi|38327566 serine/threonine protein kinase 6 [Homo sapiens] 65 2e-10
gi|38327564 serine/threonine protein kinase 6 [Homo sapiens] 65 2e-10
gi|38327562 serine/threonine protein kinase 6 [Homo sapiens] 65 2e-10
gi|62422554 p21-activated kinase 4 isoform 1 [Homo sapiens] 65 2e-10
gi|62422561 p21-activated kinase 4 isoform 2 [Homo sapiens] 65 2e-10
gi|62422563 p21-activated kinase 4 isoform 2 [Homo sapiens] 65 2e-10
gi|62422557 p21-activated kinase 4 isoform 1 [Homo sapiens] 65 2e-10
>gi|7019333 nuclear receptor binding protein [Homo sapiens]
Length = 535
Score = 1067 bits (2759), Expect = 0.0
Identities = 535/535 (100%), Positives = 535/535 (100%)
Query: 1 MSEGESQTVLSSGSDPKVESSSSAPGLTSVSPPVTSTTSAASPEEEEESEDESEILEESP 60
MSEGESQTVLSSGSDPKVESSSSAPGLTSVSPPVTSTTSAASPEEEEESEDESEILEESP
Sbjct: 1 MSEGESQTVLSSGSDPKVESSSSAPGLTSVSPPVTSTTSAASPEEEEESEDESEILEESP 60
Query: 61 CGRWQKRREEVNQRNVPGIDSAYLAMDTEEGVEVVWNEVQFSERKNYKLQEEKVRAVFDN 120
CGRWQKRREEVNQRNVPGIDSAYLAMDTEEGVEVVWNEVQFSERKNYKLQEEKVRAVFDN
Sbjct: 61 CGRWQKRREEVNQRNVPGIDSAYLAMDTEEGVEVVWNEVQFSERKNYKLQEEKVRAVFDN 120
Query: 121 LIQLEHLNIVKFHKYWADIKENKARVIFITEYMSSGSLKQFLKKTKKNHKTMNEKAWKRW 180
LIQLEHLNIVKFHKYWADIKENKARVIFITEYMSSGSLKQFLKKTKKNHKTMNEKAWKRW
Sbjct: 121 LIQLEHLNIVKFHKYWADIKENKARVIFITEYMSSGSLKQFLKKTKKNHKTMNEKAWKRW 180
Query: 181 CTQILSALSYLHSCDPPIIHGNLTCDTIFIQHNGLIKIGSVAPDTINNHVKTCREEQKNL 240
CTQILSALSYLHSCDPPIIHGNLTCDTIFIQHNGLIKIGSVAPDTINNHVKTCREEQKNL
Sbjct: 181 CTQILSALSYLHSCDPPIIHGNLTCDTIFIQHNGLIKIGSVAPDTINNHVKTCREEQKNL 240
Query: 241 HFFAPEYGEVTNVTTAVDIYSFGMCALEMAVLEIQGNGESSYVPQEAISSAIQLLEDPLQ 300
HFFAPEYGEVTNVTTAVDIYSFGMCALEMAVLEIQGNGESSYVPQEAISSAIQLLEDPLQ
Sbjct: 241 HFFAPEYGEVTNVTTAVDIYSFGMCALEMAVLEIQGNGESSYVPQEAISSAIQLLEDPLQ 300
Query: 301 REFIQKCLQSEPARRPTARELLFHPALFEVPSLKLLAAHCIVGHQHMIPENALEEITKNM 360
REFIQKCLQSEPARRPTARELLFHPALFEVPSLKLLAAHCIVGHQHMIPENALEEITKNM
Sbjct: 301 REFIQKCLQSEPARRPTARELLFHPALFEVPSLKLLAAHCIVGHQHMIPENALEEITKNM 360
Query: 361 DTSAVLAEIPAGPGREPVQTLYSQSPALELDKFLEDVRNGIYPLTAFGLPRPQQPQQEEV 420
DTSAVLAEIPAGPGREPVQTLYSQSPALELDKFLEDVRNGIYPLTAFGLPRPQQPQQEEV
Sbjct: 361 DTSAVLAEIPAGPGREPVQTLYSQSPALELDKFLEDVRNGIYPLTAFGLPRPQQPQQEEV 420
Query: 421 TSPVVPPSVKTPTPEPAEVETRKVVLMQCNIESVEEGVKHHLTLLLKLEDKLNRHLSCDL 480
TSPVVPPSVKTPTPEPAEVETRKVVLMQCNIESVEEGVKHHLTLLLKLEDKLNRHLSCDL
Sbjct: 421 TSPVVPPSVKTPTPEPAEVETRKVVLMQCNIESVEEGVKHHLTLLLKLEDKLNRHLSCDL 480
Query: 481 MPNENIPELAAELVQLGFISEADQSRLTSLLEETLNKFNFARNSTLNSAAVTVSS 535
MPNENIPELAAELVQLGFISEADQSRLTSLLEETLNKFNFARNSTLNSAAVTVSS
Sbjct: 481 MPNENIPELAAELVQLGFISEADQSRLTSLLEETLNKFNFARNSTLNSAAVTVSS 535
>gi|30794272 nuclear receptor binding protein 2 [Homo sapiens]
Length = 258
Score = 264 bits (674), Expect = 2e-70
Identities = 146/261 (55%), Positives = 179/261 (68%), Gaps = 14/261 (5%)
Query: 264 MCALEMAVLEIQGNGESSYVPQEAISSAIQLLEDPLQREFIQKCLQSEPARRPTARELLF 323
MCALEMAVLEIQ NG++ V +EAI+ A L DP REFI CL +PARRP+A LLF
Sbjct: 1 MCALEMAVLEIQTNGDTR-VTEEAIARARHSLSDPNMREFILCCLARDPARRPSAHSLLF 59
Query: 324 HPALFEVPSLKLLAAHCIVGHQHMIPENALEEITKNMDTSAVLAEIPAGPGREPVQTLYS 383
H LFEV SLKLLAAHC + HQ+++PEN +EE TK MD AVLAE+P P R P+Q YS
Sbjct: 60 HRVLFEVHSLKLLAAHCFIQHQYLMPENVVEEKTKAMDLHAVLAELPR-PRRPPLQWRYS 118
Query: 384 QSPALELDKFLEDVRNGIYPLTAF------GLPRPQQPQQEEVTSPVVPPSVKTPTPEPA 437
+ +ELDKFLEDVRNGIYPL F GLPR P EEV KTPTPEP
Sbjct: 119 EVSFMELDKFLEDVRNGIYPLMNFAATRPLGLPRVLAPPPEEV------QKAKTPTPEPF 172
Query: 438 EVETRKVVLMQCNIESVEEGVKHHLTLLLKLEDKLNRHLSCDLMPNENIPELAAELVQLG 497
+ ETRKV+ MQCN+E E+ + HLTLLL LED+L+R L+ DL+P ++ +LA+ELV G
Sbjct: 173 DSETRKVIQMQCNLERSEDKARWHLTLLLVLEDRLHRQLTYDLLPTDSAQDLASELVHYG 232
Query: 498 FISEADQSRLTSLLEETLNKF 518
F+ E D+ +L + LE T K+
Sbjct: 233 FLHEDDRMKLAAFLESTFLKY 253
>gi|50845418 WNK lysine deficient protein kinase 3 isoform 1 [Homo
sapiens]
Length = 1800
Score = 153 bits (386), Expect = 4e-37
Identities = 108/334 (32%), Positives = 164/334 (49%), Gaps = 24/334 (7%)
Query: 9 VLSSGSDPKVESSSSAPGLTSVSPPVTSTTSAASPEEEEESEDESEILEESPCGRWQKRR 68
VL G + K E S + + ++ E+E E E E + + SP GR+ K
Sbjct: 97 VLRGGQEVKYEQCSKS------TSEISKDCFKEKNEKEMEEEAEMKAVATSPSGRFLKFD 150
Query: 69 EEVNQRNVPGIDSAYLAMDTEEGVEVVWNEVQFSERKNYKLQEEKVRAVFDNLIQLEHLN 128
E+ + + Y +DTE VEV W E+Q +RK K ++++ + + L L+H N
Sbjct: 151 IELGRG---AFKTVYKGLDTETWVEVAWCELQ--DRKLTKAEQQRFKEEAEMLKGLQHPN 205
Query: 129 IVKFHKYWADIKENKARVIFITEYMSSGSLKQFLKKTKKNHKTMNEKAWKRWCTQILSAL 188
IV+F+ W I + K ++ +TE M+SG+LK +LK+ K M K + WC QIL L
Sbjct: 206 IVRFYDSWESILKGKKCIVLVTELMTSGTLKTYLKR----FKVMKPKVLRSWCRQILKGL 261
Query: 189 SYLHSCDPPIIHGNLTCDTIFIQ-HNGLIKIGSVAPDTINNHVKTCREEQKNLHFFAPEY 247
+LH+ PPIIH +L CD IFI G +KIG + T+ + F APE
Sbjct: 262 QFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL-MRTSFAKSVIGTPEFMAPEM 320
Query: 248 GEVTNVTTAVDIYSFGMCALEMAVLEIQ----GNGESSY--VPQEAISSAIQLLEDPLQR 301
E + +VD+Y+FGMC LEMA E N Y V ++ + DP +
Sbjct: 321 YE-EHYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRKVTSGIKPASFNKVTDPEVK 379
Query: 302 EFIQKCLQSEPARRPTARELLFHPALFEVPSLKL 335
E I+ C++ + R + R+LL H E L++
Sbjct: 380 EIIEGCIRQNKSERLSIRDLLNHAFFAEDTGLRV 413
>gi|50845416 WNK lysine deficient protein kinase 3 isoform 2 [Homo
sapiens]
Length = 1743
Score = 153 bits (386), Expect = 4e-37
Identities = 108/334 (32%), Positives = 164/334 (49%), Gaps = 24/334 (7%)
Query: 9 VLSSGSDPKVESSSSAPGLTSVSPPVTSTTSAASPEEEEESEDESEILEESPCGRWQKRR 68
VL G + K E S + + ++ E+E E E E + + SP GR+ K
Sbjct: 97 VLRGGQEVKYEQCSKS------TSEISKDCFKEKNEKEMEEEAEMKAVATSPSGRFLKFD 150
Query: 69 EEVNQRNVPGIDSAYLAMDTEEGVEVVWNEVQFSERKNYKLQEEKVRAVFDNLIQLEHLN 128
E+ + + Y +DTE VEV W E+Q +RK K ++++ + + L L+H N
Sbjct: 151 IELGRG---AFKTVYKGLDTETWVEVAWCELQ--DRKLTKAEQQRFKEEAEMLKGLQHPN 205
Query: 129 IVKFHKYWADIKENKARVIFITEYMSSGSLKQFLKKTKKNHKTMNEKAWKRWCTQILSAL 188
IV+F+ W I + K ++ +TE M+SG+LK +LK+ K M K + WC QIL L
Sbjct: 206 IVRFYDSWESILKGKKCIVLVTELMTSGTLKTYLKR----FKVMKPKVLRSWCRQILKGL 261
Query: 189 SYLHSCDPPIIHGNLTCDTIFIQ-HNGLIKIGSVAPDTINNHVKTCREEQKNLHFFAPEY 247
+LH+ PPIIH +L CD IFI G +KIG + T+ + F APE
Sbjct: 262 QFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL-MRTSFAKSVIGTPEFMAPEM 320
Query: 248 GEVTNVTTAVDIYSFGMCALEMAVLEIQ----GNGESSY--VPQEAISSAIQLLEDPLQR 301
E + +VD+Y+FGMC LEMA E N Y V ++ + DP +
Sbjct: 321 YE-EHYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRKVTSGIKPASFNKVTDPEVK 379
Query: 302 EFIQKCLQSEPARRPTARELLFHPALFEVPSLKL 335
E I+ C++ + R + R+LL H E L++
Sbjct: 380 EIIEGCIRQNKSERLSIRDLLNHAFFAEDTGLRV 413
>gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens]
Length = 2217
Score = 151 bits (382), Expect = 1e-36
Identities = 102/299 (34%), Positives = 152/299 (50%), Gaps = 18/299 (6%)
Query: 33 PVTSTTSAASPEEEEESEDESEILEESPCGRWQKRREEVNQRNVPGIDSAYLAMDTEEGV 92
P T PEEEE+ ED+ + + S GR+ K E+ + + + Y +DTE V
Sbjct: 163 PEPGRTRRDEPEEEEDDEDDLKAVATSLDGRFLKFDIELGRGS---FKTVYKGLDTETWV 219
Query: 93 EVVWNEVQFSERKNYKLQEEKVRAVFDNLIQLEHLNIVKFHKYWADIKENKARVIFITEY 152
EV W E+Q +RK KL+ ++ + + L L+H NIV+F+ +W + K ++ +TE
Sbjct: 220 EVAWCELQ--DRKLTKLERQRFKEEAEMLKGLQHPNIVRFYDFWESSAKGKRCIVLVTEL 277
Query: 153 MSSGSLKQFLKKTKKNHKTMNEKAWKRWCTQILSALSYLHSCDPPIIHGNLTCDTIFIQ- 211
M+SG+LK +LK+ K M K + WC QIL L +LH+ PPIIH +L CD IFI
Sbjct: 278 MTSGTLKTYLKR----FKVMKPKVLRSWCRQILKGLLFLHTRTPPIIHRDLKCDNIFITG 333
Query: 212 HNGLIKIGSVAPDTINNHVKTCREEQKNLHFFAPEYGEVTNVTTAVDIYSFGMCALEMAV 271
G +KIG + T+ + F APE E + +VD+Y+FGMC LEMA
Sbjct: 334 PTGSVKIGDLGLATL-KRASFAKSVIGTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMAT 391
Query: 272 LEIQ----GNGESSY--VPQEAISSAIQLLEDPLQREFIQKCLQSEPARRPTARELLFH 324
E N Y V ++ + + DP +E I +C+ R ++LL H
Sbjct: 392 SEYPYSECQNAAQIYRKVTCGIKPASFEKVHDPEIKEIIGECICKNKEERYEIKDLLSH 450
>gi|34365793 WNK lysine deficient protein kinase 4 [Homo sapiens]
Length = 1243
Score = 145 bits (365), Expect = 1e-34
Identities = 129/488 (26%), Positives = 210/488 (43%), Gaps = 67/488 (13%)
Query: 2 SEGESQTVLSSGSDPKVESSSSAPGLTSVSPPVTSTTSAASPEEEEESEDESEILEESPC 61
+EG + P++ S+ PG + E+EE+ + E++ + SP
Sbjct: 111 TEGAPVKAAEDSARPELPDSAVGPGSREPLRVPEAVALERRREQEEKEDMETQAVATSPD 170
Query: 62 GRWQKRREEVNQRNVPGIDSAYLAMDTEEGVEVVWNEVQFSERKNYKLQEEKVRAVFDNL 121
GR+ K E+ + + + Y +DT+ VEV W E+Q RK + + ++ + L
Sbjct: 171 GRYLKFDIEIGRGS---FKTVYRGLDTDTTVEVAWCELQ--TRKLSRAERQRFSEEVEML 225
Query: 122 IQLEHLNIVKFHKYWADIKENKARVIFITEYMSSGSLKQFLKKTKKNHKTMNEKAWKRWC 181
L+H NIV+F+ W + + ++ +TE M+SG+LK +L++ ++ M + +RW
Sbjct: 226 KGLQHPNIVRFYDSWKSVLRGQVCIVLVTELMTSGTLKTYLRRFRE----MKPRVLQRWS 281
Query: 182 TQILSALSYLHSCDPPIIHGNLTCDTIFIQ-HNGLIKIGSVAPDTINNHVKTCREEQKNL 240
QIL L +LHS PPI+H +L CD +FI G +KIG + T+ +
Sbjct: 282 RQILRGLHFLHSRVPPILHRDLKCDNVFITGPTGSVKIGDLGLATL-KRASFAKSVIGTP 340
Query: 241 HFFAPEYGEVTNVTTAVDIYSFGMCALEMAVLEIQ----GNGESSY--VPQEAISSAIQL 294
F APE E AVD+Y+FGMC LEMA E N Y V ++
Sbjct: 341 EFMAPEMYE-EKYDEAVDVYAFGMCMLEMATSEYPYSECQNAAQIYRKVTSGRKPNSFHK 399
Query: 295 LEDPLQREFIQKCLQSEPARRPTARELLFHPALF----------------EVPSLKLLAA 338
++ P +E I+ C++++ R T ++LL H A F E P LKL
Sbjct: 400 VKIPEVKEIIEGCIRTDKNERFTIQDLLAH-AFFREERGVHVELAEEDDGEKPGLKLWLR 458
Query: 339 ------------HCIVGHQHMIPENALEEITKNMDTSAVLAEIPAGP----GREPVQTLY 382
+ + + +A EE+ + M ++ E P RE V +
Sbjct: 459 MEDARRGGRPRDNQAIEFLFQLGRDAAEEVAQEMVALGLVCEADYQPVARAVRERVAAIQ 518
Query: 383 SQSPALELDKFLEDVRNGIYPLTAFGLPRPQQPQQEEVTSPVV--PPSVKTPTPEPAEVE 440
+ L + LE + P +P T P+ PPSV P PE E +
Sbjct: 519 RKREKLRKARELEAL--------------PPEPGPPPATVPMAPGPPSVFPPEPEEPEAD 564
Query: 441 TRKVVLMQ 448
+ L +
Sbjct: 565 QHQPFLFR 572
>gi|148612809 WNK lysine deficient protein kinase 1 [Homo sapiens]
Length = 2382
Score = 144 bits (364), Expect = 2e-34
Identities = 111/333 (33%), Positives = 162/333 (48%), Gaps = 27/333 (8%)
Query: 8 TVLSSGSDPKVESSSSAPGLTSVSPPVTSTT---SAASPEEEE-ESEDESEILEE----- 58
TV SS S + S S G PP S + SA P+EE + +D+ E LE
Sbjct: 155 TVPSSTSKDRPVSQPSLVGSKEEPPPARSGSGGGSAKEPQEERSQQQDDIEELETKAVGM 214
Query: 59 SPCGRWQKRREEVNQRNVPGIDSAYLAMDTEEGVEVVWNEVQFSERKNYKLQEEKVRAVF 118
S GR+ K E+ + + + Y +DTE VEV W E+Q +RK K + ++ +
Sbjct: 215 SNDGRFLKFDIEIGRGS---FKTVYKGLDTETTVEVAWCELQ--DRKLTKSERQRFKEEA 269
Query: 119 DNLIQLEHLNIVKFHKYWADIKENKARVIFITEYMSSGSLKQFLKKTKKNHKTMNEKAWK 178
+ L L+H NIV+F+ W + K ++ +TE M+SG+LK +LK+ K M K +
Sbjct: 270 EMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKR----FKVMKIKVLR 325
Query: 179 RWCTQILSALSYLHSCDPPIIHGNLTCDTIFIQ-HNGLIKIGSVAPDTINNHVKTCREEQ 237
WC QIL L +LH+ PPIIH +L CD IFI G +KIG + T+ +
Sbjct: 326 SWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL-KRASFAKSVI 384
Query: 238 KNLHFFAPEYGEVTNVTTAVDIYSFGMCALEMAVLEIQ----GNGESSY--VPQEAISSA 291
F APE E +VD+Y+FGMC LEMA E N Y V ++
Sbjct: 385 GTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPAS 443
Query: 292 IQLLEDPLQREFIQKCLQSEPARRPTARELLFH 324
+ P +E I+ C++ R + ++LL H
Sbjct: 444 FDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNH 476
>gi|191252782 p21-activated kinase 6 [Homo sapiens]
Length = 681
Score = 71.2 bits (173), Expect = 2e-12
Identities = 61/259 (23%), Positives = 118/259 (45%), Gaps = 34/259 (13%)
Query: 84 LAMDTEEGVEVVWNEVQFSERKNYKLQEEKVRAVFDNLIQLEHLNIVKFHKYWADIKENK 143
LA + G +V + +++ +L +V + D +H N+V+ +K + +E
Sbjct: 423 LAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRD----YQHFNVVEMYKSYLVGEE-- 476
Query: 144 ARVIFITEYMSSGSLKQFLKKTKKNHKTMNEKAWKRWCTQILSALSYLHSCDPPIIHGNL 203
+ + E++ G+L + + + +NE+ C +L AL+YLH+ +IH ++
Sbjct: 477 --LWVLMEFLQGGALTDIVSQVR-----LNEEQIATVCEAVLQALAYLHA--QGVIHRDI 527
Query: 204 TCDTIFIQHNGLIKIGSVA-PDTINNHVKTCREEQKNLHFFAPEYGEVTNVTTAVDIYSF 262
D+I + +G +K+ I+ V + ++ APE + T VDI+S
Sbjct: 528 KSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSL 587
Query: 263 GMCALEMAVLEIQGNGESSYVPQEAISSAIQLLEDP------------LQREFIQKCLQS 310
G+ +EM +GE Y + + +L + P + R+F+++ L
Sbjct: 588 GIMVIEMV------DGEPPYFSDSPVQAMKRLRDSPPPKLKNSHKVSPVLRDFLERMLVR 641
Query: 311 EPARRPTARELLFHPALFE 329
+P R TA+ELL HP L +
Sbjct: 642 DPQERATAQELLDHPFLLQ 660
>gi|191252780 p21-activated kinase 6 [Homo sapiens]
Length = 681
Score = 71.2 bits (173), Expect = 2e-12
Identities = 61/259 (23%), Positives = 118/259 (45%), Gaps = 34/259 (13%)
Query: 84 LAMDTEEGVEVVWNEVQFSERKNYKLQEEKVRAVFDNLIQLEHLNIVKFHKYWADIKENK 143
LA + G +V + +++ +L +V + D +H N+V+ +K + +E
Sbjct: 423 LAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRD----YQHFNVVEMYKSYLVGEE-- 476
Query: 144 ARVIFITEYMSSGSLKQFLKKTKKNHKTMNEKAWKRWCTQILSALSYLHSCDPPIIHGNL 203
+ + E++ G+L + + + +NE+ C +L AL+YLH+ +IH ++
Sbjct: 477 --LWVLMEFLQGGALTDIVSQVR-----LNEEQIATVCEAVLQALAYLHA--QGVIHRDI 527
Query: 204 TCDTIFIQHNGLIKIGSVA-PDTINNHVKTCREEQKNLHFFAPEYGEVTNVTTAVDIYSF 262
D+I + +G +K+ I+ V + ++ APE + T VDI+S
Sbjct: 528 KSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSL 587
Query: 263 GMCALEMAVLEIQGNGESSYVPQEAISSAIQLLEDP------------LQREFIQKCLQS 310
G+ +EM +GE Y + + +L + P + R+F+++ L
Sbjct: 588 GIMVIEMV------DGEPPYFSDSPVQAMKRLRDSPPPKLKNSHKVSPVLRDFLERMLVR 641
Query: 311 EPARRPTARELLFHPALFE 329
+P R TA+ELL HP L +
Sbjct: 642 DPQERATAQELLDHPFLLQ 660
>gi|9910476 p21-activated kinase 6 [Homo sapiens]
Length = 681
Score = 71.2 bits (173), Expect = 2e-12
Identities = 61/259 (23%), Positives = 118/259 (45%), Gaps = 34/259 (13%)
Query: 84 LAMDTEEGVEVVWNEVQFSERKNYKLQEEKVRAVFDNLIQLEHLNIVKFHKYWADIKENK 143
LA + G +V + +++ +L +V + D +H N+V+ +K + +E
Sbjct: 423 LAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRD----YQHFNVVEMYKSYLVGEE-- 476
Query: 144 ARVIFITEYMSSGSLKQFLKKTKKNHKTMNEKAWKRWCTQILSALSYLHSCDPPIIHGNL 203
+ + E++ G+L + + + +NE+ C +L AL+YLH+ +IH ++
Sbjct: 477 --LWVLMEFLQGGALTDIVSQVR-----LNEEQIATVCEAVLQALAYLHA--QGVIHRDI 527
Query: 204 TCDTIFIQHNGLIKIGSVA-PDTINNHVKTCREEQKNLHFFAPEYGEVTNVTTAVDIYSF 262
D+I + +G +K+ I+ V + ++ APE + T VDI+S
Sbjct: 528 KSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSL 587
Query: 263 GMCALEMAVLEIQGNGESSYVPQEAISSAIQLLEDP------------LQREFIQKCLQS 310
G+ +EM +GE Y + + +L + P + R+F+++ L
Sbjct: 588 GIMVIEMV------DGEPPYFSDSPVQAMKRLRDSPPPKLKNSHKVSPVLRDFLERMLVR 641
Query: 311 EPARRPTARELLFHPALFE 329
+P R TA+ELL HP L +
Sbjct: 642 DPQERATAQELLDHPFLLQ 660
>gi|19424132 NIMA-related kinase 7 [Homo sapiens]
Length = 302
Score = 68.9 bits (167), Expect = 1e-11
Identities = 56/244 (22%), Positives = 111/244 (45%), Gaps = 19/244 (7%)
Query: 83 YLAMDTEEGVEVVWNEVQFSERKNYKLQEEKVRAVFDNLIQLEHLNIVKFHKYWADIKEN 142
Y A +GV V +VQ + + K + + ++ + D L QL H N++K+ Y + I++N
Sbjct: 49 YRAACLLDGVPVALKKVQIFDLMDAKARADCIKEI-DLLKQLNHPNVIKY--YASFIEDN 105
Query: 143 KARVIFITEYMSSGSLKQFLKKTKKNHKTMNEKAWKRWCTQILSALSYLHSCDPPIIHGN 202
+ ++ E +G L + +K KK + + E+ ++ Q+ SAL ++HS ++H +
Sbjct: 106 ELNIVL--ELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHS--RRVMHRD 161
Query: 203 LTCDTIFIQHNGLIKIGSVAPDTINNHVKTCREEQKNL-HFFAPEYGEVTNVTTAVDIYS 261
+ +FI G++K+G + + T ++ +PE DI+S
Sbjct: 162 IKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWS 221
Query: 262 FGMCALEMAVLEIQGNGESSYVPQEAISSAIQLLEDP---------LQREFIQKCLQSEP 312
G EMA L+ G+ + ++ I+ + P R+ + C+ +P
Sbjct: 222 LGCLLYEMAALQSPFYGDKMNL--YSLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDP 279
Query: 313 ARRP 316
+RP
Sbjct: 280 EKRP 283
>gi|42794769 p21-activated kinase 1 isoform 2 [Homo sapiens]
Length = 545
Score = 68.2 bits (165), Expect = 2e-11
Identities = 78/329 (23%), Positives = 144/329 (43%), Gaps = 43/329 (13%)
Query: 18 VESSSSAPGLTSVSPPVTSTTSAASPEEEEESEDESEILEES----PCGRWQKRREEVNQ 73
V +S +P + +PP T + +++ + DE EILE+ G +K+ +
Sbjct: 217 VATSPISPTENNTTPPDALTRNTEKQKKKPKMSDE-EILEKLRSIVSVGDPKKKYTRFEK 275
Query: 74 RNVPGIDSAYLAMDTEEGVEVVWNEVQFSERKNYKLQEEKVRAVFDNLIQLEHLNIVKFH 133
+ Y AMD G EV ++ ++ +L ++ + +N ++ NIV +
Sbjct: 276 IGQGASGTVYTAMDVATGQEVAIKQMNLQQQPKKELIINEILVMREN----KNPNIVNYL 331
Query: 134 KYWADIKENKARVIFITEYMSSGSLKQFLKKTKKNHKTMNEKAWKRWCTQILSALSYLHS 193
+ E + + EY++ GSL + +T M+E C + L AL +LHS
Sbjct: 332 DSYLVGDE----LWVVMEYLAGGSLTDVVTET-----CMDEGQIAAVCRECLQALEFLHS 382
Query: 194 CDPPIIHGNLTCDTIFIQHNGLIKI---GSVAPDTINNHVKTCREEQKNLHFFAPEYGEV 250
+IH ++ D I + +G +K+ G A T ++ ++ APE
Sbjct: 383 NQ--VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTP--YWMAPEVVTR 438
Query: 251 TNVTTAVDIYSFGMCALEMAVLEIQGNGESSYVPQEAISSAIQL-------LEDP----- 298
VDI+S G+ A+EM GE Y+ + + + + L++P
Sbjct: 439 KAYGPKVDIWSLGIMAIEMI------EGEPPYLNENPLRALYLIATNGTPELQNPEKLSA 492
Query: 299 LQREFIQKCLQSEPARRPTARELLFHPAL 327
+ R+F+ +CL+ + +R +A+ELL H L
Sbjct: 493 IFRDFLNRCLEMDVEKRGSAKELLQHQFL 521
>gi|190886457 p21-activated kinase 1 isoform 1 [Homo sapiens]
Length = 553
Score = 65.9 bits (159), Expect = 9e-11
Identities = 76/324 (23%), Positives = 142/324 (43%), Gaps = 43/324 (13%)
Query: 18 VESSSSAPGLTSVSPPVTSTTSAASPEEEEESEDESEILEES----PCGRWQKRREEVNQ 73
V +S +P + +PP T + +++ + DE EILE+ G +K+ +
Sbjct: 217 VATSPISPTENNTTPPDALTRNTEKQKKKPKMSDE-EILEKLRSIVSVGDPKKKYTRFEK 275
Query: 74 RNVPGIDSAYLAMDTEEGVEVVWNEVQFSERKNYKLQEEKVRAVFDNLIQLEHLNIVKFH 133
+ Y AMD G EV ++ ++ +L ++ + +N ++ NIV +
Sbjct: 276 IGQGASGTVYTAMDVATGQEVAIKQMNLQQQPKKELIINEILVMREN----KNPNIVNYL 331
Query: 134 KYWADIKENKARVIFITEYMSSGSLKQFLKKTKKNHKTMNEKAWKRWCTQILSALSYLHS 193
+ E + + EY++ GSL + +T M+E C + L AL +LHS
Sbjct: 332 DSYLVGDE----LWVVMEYLAGGSLTDVVTET-----CMDEGQIAAVCRECLQALEFLHS 382
Query: 194 CDPPIIHGNLTCDTIFIQHNGLIKI---GSVAPDTINNHVKTCREEQKNLHFFAPEYGEV 250
+IH ++ D I + +G +K+ G A T ++ ++ APE
Sbjct: 383 NQ--VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTP--YWMAPEVVTR 438
Query: 251 TNVTTAVDIYSFGMCALEMAVLEIQGNGESSYVPQEAISSAIQL-------LEDP----- 298
VDI+S G+ A+EM GE Y+ + + + + L++P
Sbjct: 439 KAYGPKVDIWSLGIMAIEMI------EGEPPYLNENPLRALYLIATNGTPELQNPEKLSA 492
Query: 299 LQREFIQKCLQSEPARRPTARELL 322
+ R+F+ +CL+ + +R +A+ELL
Sbjct: 493 IFRDFLNRCLEMDVEKRGSAKELL 516
>gi|189491759 p21-activated kinase 3 isoform d [Homo sapiens]
Length = 559
Score = 65.5 bits (158), Expect = 1e-10
Identities = 79/341 (23%), Positives = 147/341 (43%), Gaps = 43/341 (12%)
Query: 6 SQTVLSSGSDPKVESSSSAPGLTSVSPPVTSTTSAASPEEEEESEDESEILEES----PC 61
+++V+ S + P V + P + T + ++ + DE EILE+
Sbjct: 218 TRSVVESIASPAVPNKEVTPPSAENANSSTLYRNTDRQRKKSKMTDE-EILEKLRSIVSV 276
Query: 62 GRWQKRREEVNQRNVPGIDSAYLAMDTEEGVEVVWNEVQFSERKNYKLQEEKVRAVFDNL 121
G +K+ + + Y A+D G EV ++ ++ +L ++ + +N
Sbjct: 277 GDPKKKYTRFEKIGQGASGTVYTALDIATGQEVAIKQMNLQQQPKKELIINEILVMREN- 335
Query: 122 IQLEHLNIVKFHKYWADIKENKARVIFITEYMSSGSLKQFLKKTKKNHKTMNEKAWKRWC 181
++ NIV + + E + + EY++ GSL + +T M+E C
Sbjct: 336 ---KNPNIVNYLDSYLVGDE----LWVVMEYLAGGSLTDVVTET-----CMDEGQIAAVC 383
Query: 182 TQILSALSYLHSCDPPIIHGNLTCDTIFIQHNGLIKI---GSVAPDTINNHVKTCREEQK 238
+ L AL +LHS +IH ++ D I + +G +K+ G A T ++
Sbjct: 384 RECLQALDFLHSNQ--VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTP 441
Query: 239 NLHFFAPEYGEVTNVTTAVDIYSFGMCALEMAVLEIQGNGESSYVPQEAISSAIQL---- 294
++ APE VDI+S G+ A+EM GE Y+ + + + +
Sbjct: 442 --YWMAPEVVTRKAYGPKVDIWSLGIMAIEMV------EGEPPYLNENPLRALYLIATNG 493
Query: 295 ---LEDPLQ-----REFIQKCLQSEPARRPTARELLFHPAL 327
L++P + R+F+ +CL+ + RR +A+ELL HP L
Sbjct: 494 TPELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQHPFL 534
Score = 29.6 bits (65), Expect = 7.2
Identities = 13/27 (48%), Positives = 16/27 (59%)
Query: 28 TSVSPPVTSTTSAASPEEEEESEDESE 54
T+ PP+ S EEEEE EDE+E
Sbjct: 175 TASEPPLAPPVSEEEDEEEEEEEDENE 201
>gi|189491757 p21-activated kinase 3 isoform c [Homo sapiens]
Length = 565
Score = 65.5 bits (158), Expect = 1e-10
Identities = 79/341 (23%), Positives = 147/341 (43%), Gaps = 43/341 (12%)
Query: 6 SQTVLSSGSDPKVESSSSAPGLTSVSPPVTSTTSAASPEEEEESEDESEILEES----PC 61
+++V+ S + P V + P + T + ++ + DE EILE+
Sbjct: 224 TRSVVESIASPAVPNKEVTPPSAENANSSTLYRNTDRQRKKSKMTDE-EILEKLRSIVSV 282
Query: 62 GRWQKRREEVNQRNVPGIDSAYLAMDTEEGVEVVWNEVQFSERKNYKLQEEKVRAVFDNL 121
G +K+ + + Y A+D G EV ++ ++ +L ++ + +N
Sbjct: 283 GDPKKKYTRFEKIGQGASGTVYTALDIATGQEVAIKQMNLQQQPKKELIINEILVMREN- 341
Query: 122 IQLEHLNIVKFHKYWADIKENKARVIFITEYMSSGSLKQFLKKTKKNHKTMNEKAWKRWC 181
++ NIV + + E + + EY++ GSL + +T M+E C
Sbjct: 342 ---KNPNIVNYLDSYLVGDE----LWVVMEYLAGGSLTDVVTET-----CMDEGQIAAVC 389
Query: 182 TQILSALSYLHSCDPPIIHGNLTCDTIFIQHNGLIKI---GSVAPDTINNHVKTCREEQK 238
+ L AL +LHS +IH ++ D I + +G +K+ G A T ++
Sbjct: 390 RECLQALDFLHSNQ--VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTP 447
Query: 239 NLHFFAPEYGEVTNVTTAVDIYSFGMCALEMAVLEIQGNGESSYVPQEAISSAIQL---- 294
++ APE VDI+S G+ A+EM GE Y+ + + + +
Sbjct: 448 --YWMAPEVVTRKAYGPKVDIWSLGIMAIEMV------EGEPPYLNENPLRALYLIATNG 499
Query: 295 ---LEDPLQ-----REFIQKCLQSEPARRPTARELLFHPAL 327
L++P + R+F+ +CL+ + RR +A+ELL HP L
Sbjct: 500 TPELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQHPFL 540
Score = 29.6 bits (65), Expect = 7.2
Identities = 13/27 (48%), Positives = 16/27 (59%)
Query: 28 TSVSPPVTSTTSAASPEEEEESEDESE 54
T+ PP+ S EEEEE EDE+E
Sbjct: 181 TASEPPLAPPVSEEEDEEEEEEEDENE 207
>gi|189491755 p21-activated kinase 3 isoform b [Homo sapiens]
Length = 580
Score = 65.5 bits (158), Expect = 1e-10
Identities = 79/341 (23%), Positives = 147/341 (43%), Gaps = 43/341 (12%)
Query: 6 SQTVLSSGSDPKVESSSSAPGLTSVSPPVTSTTSAASPEEEEESEDESEILEES----PC 61
+++V+ S + P V + P + T + ++ + DE EILE+
Sbjct: 239 TRSVVESIASPAVPNKEVTPPSAENANSSTLYRNTDRQRKKSKMTDE-EILEKLRSIVSV 297
Query: 62 GRWQKRREEVNQRNVPGIDSAYLAMDTEEGVEVVWNEVQFSERKNYKLQEEKVRAVFDNL 121
G +K+ + + Y A+D G EV ++ ++ +L ++ + +N
Sbjct: 298 GDPKKKYTRFEKIGQGASGTVYTALDIATGQEVAIKQMNLQQQPKKELIINEILVMREN- 356
Query: 122 IQLEHLNIVKFHKYWADIKENKARVIFITEYMSSGSLKQFLKKTKKNHKTMNEKAWKRWC 181
++ NIV + + E + + EY++ GSL + +T M+E C
Sbjct: 357 ---KNPNIVNYLDSYLVGDE----LWVVMEYLAGGSLTDVVTET-----CMDEGQIAAVC 404
Query: 182 TQILSALSYLHSCDPPIIHGNLTCDTIFIQHNGLIKI---GSVAPDTINNHVKTCREEQK 238
+ L AL +LHS +IH ++ D I + +G +K+ G A T ++
Sbjct: 405 RECLQALDFLHSNQ--VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTP 462
Query: 239 NLHFFAPEYGEVTNVTTAVDIYSFGMCALEMAVLEIQGNGESSYVPQEAISSAIQL---- 294
++ APE VDI+S G+ A+EM GE Y+ + + + +
Sbjct: 463 --YWMAPEVVTRKAYGPKVDIWSLGIMAIEMV------EGEPPYLNENPLRALYLIATNG 514
Query: 295 ---LEDPLQ-----REFIQKCLQSEPARRPTARELLFHPAL 327
L++P + R+F+ +CL+ + RR +A+ELL HP L
Sbjct: 515 TPELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQHPFL 555
Score = 29.6 bits (65), Expect = 7.2
Identities = 13/27 (48%), Positives = 16/27 (59%)
Query: 28 TSVSPPVTSTTSAASPEEEEESEDESE 54
T+ PP+ S EEEEE EDE+E
Sbjct: 196 TASEPPLAPPVSEEEDEEEEEEEDENE 222
>gi|189491753 p21-activated kinase 3 isoform a [Homo sapiens]
Length = 544
Score = 65.5 bits (158), Expect = 1e-10
Identities = 79/341 (23%), Positives = 147/341 (43%), Gaps = 43/341 (12%)
Query: 6 SQTVLSSGSDPKVESSSSAPGLTSVSPPVTSTTSAASPEEEEESEDESEILEES----PC 61
+++V+ S + P V + P + T + ++ + DE EILE+
Sbjct: 203 TRSVVESIASPAVPNKEVTPPSAENANSSTLYRNTDRQRKKSKMTDE-EILEKLRSIVSV 261
Query: 62 GRWQKRREEVNQRNVPGIDSAYLAMDTEEGVEVVWNEVQFSERKNYKLQEEKVRAVFDNL 121
G +K+ + + Y A+D G EV ++ ++ +L ++ + +N
Sbjct: 262 GDPKKKYTRFEKIGQGASGTVYTALDIATGQEVAIKQMNLQQQPKKELIINEILVMREN- 320
Query: 122 IQLEHLNIVKFHKYWADIKENKARVIFITEYMSSGSLKQFLKKTKKNHKTMNEKAWKRWC 181
++ NIV + + E + + EY++ GSL + +T M+E C
Sbjct: 321 ---KNPNIVNYLDSYLVGDE----LWVVMEYLAGGSLTDVVTET-----CMDEGQIAAVC 368
Query: 182 TQILSALSYLHSCDPPIIHGNLTCDTIFIQHNGLIKI---GSVAPDTINNHVKTCREEQK 238
+ L AL +LHS +IH ++ D I + +G +K+ G A T ++
Sbjct: 369 RECLQALDFLHSNQ--VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTP 426
Query: 239 NLHFFAPEYGEVTNVTTAVDIYSFGMCALEMAVLEIQGNGESSYVPQEAISSAIQL---- 294
++ APE VDI+S G+ A+EM GE Y+ + + + +
Sbjct: 427 --YWMAPEVVTRKAYGPKVDIWSLGIMAIEMV------EGEPPYLNENPLRALYLIATNG 478
Query: 295 ---LEDPLQ-----REFIQKCLQSEPARRPTARELLFHPAL 327
L++P + R+F+ +CL+ + RR +A+ELL HP L
Sbjct: 479 TPELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQHPFL 519
Score = 29.6 bits (65), Expect = 7.2
Identities = 13/27 (48%), Positives = 16/27 (59%)
Query: 28 TSVSPPVTSTTSAASPEEEEESEDESE 54
T+ PP+ S EEEEE EDE+E
Sbjct: 160 TASEPPLAPPVSEEEDEEEEEEEDENE 186
>gi|189491751 p21-activated kinase 3 isoform a [Homo sapiens]
Length = 544
Score = 65.5 bits (158), Expect = 1e-10
Identities = 79/341 (23%), Positives = 147/341 (43%), Gaps = 43/341 (12%)
Query: 6 SQTVLSSGSDPKVESSSSAPGLTSVSPPVTSTTSAASPEEEEESEDESEILEES----PC 61
+++V+ S + P V + P + T + ++ + DE EILE+
Sbjct: 203 TRSVVESIASPAVPNKEVTPPSAENANSSTLYRNTDRQRKKSKMTDE-EILEKLRSIVSV 261
Query: 62 GRWQKRREEVNQRNVPGIDSAYLAMDTEEGVEVVWNEVQFSERKNYKLQEEKVRAVFDNL 121
G +K+ + + Y A+D G EV ++ ++ +L ++ + +N
Sbjct: 262 GDPKKKYTRFEKIGQGASGTVYTALDIATGQEVAIKQMNLQQQPKKELIINEILVMREN- 320
Query: 122 IQLEHLNIVKFHKYWADIKENKARVIFITEYMSSGSLKQFLKKTKKNHKTMNEKAWKRWC 181
++ NIV + + E + + EY++ GSL + +T M+E C
Sbjct: 321 ---KNPNIVNYLDSYLVGDE----LWVVMEYLAGGSLTDVVTET-----CMDEGQIAAVC 368
Query: 182 TQILSALSYLHSCDPPIIHGNLTCDTIFIQHNGLIKI---GSVAPDTINNHVKTCREEQK 238
+ L AL +LHS +IH ++ D I + +G +K+ G A T ++
Sbjct: 369 RECLQALDFLHSNQ--VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTP 426
Query: 239 NLHFFAPEYGEVTNVTTAVDIYSFGMCALEMAVLEIQGNGESSYVPQEAISSAIQL---- 294
++ APE VDI+S G+ A+EM GE Y+ + + + +
Sbjct: 427 --YWMAPEVVTRKAYGPKVDIWSLGIMAIEMV------EGEPPYLNENPLRALYLIATNG 478
Query: 295 ---LEDPLQ-----REFIQKCLQSEPARRPTARELLFHPAL 327
L++P + R+F+ +CL+ + RR +A+ELL HP L
Sbjct: 479 TPELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQHPFL 519
Score = 29.6 bits (65), Expect = 7.2
Identities = 13/27 (48%), Positives = 16/27 (59%)
Query: 28 TSVSPPVTSTTSAASPEEEEESEDESE 54
T+ PP+ S EEEEE EDE+E
Sbjct: 160 TASEPPLAPPVSEEEDEEEEEEEDENE 186
>gi|4505601 p21-activated kinase 3 isoform a [Homo sapiens]
Length = 544
Score = 65.5 bits (158), Expect = 1e-10
Identities = 79/341 (23%), Positives = 147/341 (43%), Gaps = 43/341 (12%)
Query: 6 SQTVLSSGSDPKVESSSSAPGLTSVSPPVTSTTSAASPEEEEESEDESEILEES----PC 61
+++V+ S + P V + P + T + ++ + DE EILE+
Sbjct: 203 TRSVVESIASPAVPNKEVTPPSAENANSSTLYRNTDRQRKKSKMTDE-EILEKLRSIVSV 261
Query: 62 GRWQKRREEVNQRNVPGIDSAYLAMDTEEGVEVVWNEVQFSERKNYKLQEEKVRAVFDNL 121
G +K+ + + Y A+D G EV ++ ++ +L ++ + +N
Sbjct: 262 GDPKKKYTRFEKIGQGASGTVYTALDIATGQEVAIKQMNLQQQPKKELIINEILVMREN- 320
Query: 122 IQLEHLNIVKFHKYWADIKENKARVIFITEYMSSGSLKQFLKKTKKNHKTMNEKAWKRWC 181
++ NIV + + E + + EY++ GSL + +T M+E C
Sbjct: 321 ---KNPNIVNYLDSYLVGDE----LWVVMEYLAGGSLTDVVTET-----CMDEGQIAAVC 368
Query: 182 TQILSALSYLHSCDPPIIHGNLTCDTIFIQHNGLIKI---GSVAPDTINNHVKTCREEQK 238
+ L AL +LHS +IH ++ D I + +G +K+ G A T ++
Sbjct: 369 RECLQALDFLHSNQ--VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTP 426
Query: 239 NLHFFAPEYGEVTNVTTAVDIYSFGMCALEMAVLEIQGNGESSYVPQEAISSAIQL---- 294
++ APE VDI+S G+ A+EM GE Y+ + + + +
Sbjct: 427 --YWMAPEVVTRKAYGPKVDIWSLGIMAIEMV------EGEPPYLNENPLRALYLIATNG 478
Query: 295 ---LEDPLQ-----REFIQKCLQSEPARRPTARELLFHPAL 327
L++P + R+F+ +CL+ + RR +A+ELL HP L
Sbjct: 479 TPELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQHPFL 519
Score = 29.6 bits (65), Expect = 7.2
Identities = 13/27 (48%), Positives = 16/27 (59%)
Query: 28 TSVSPPVTSTTSAASPEEEEESEDESE 54
T+ PP+ S EEEEE EDE+E
Sbjct: 160 TASEPPLAPPVSEEEDEEEEEEEDENE 186
>gi|222136641 NIMA-related kinase 9 [Homo sapiens]
Length = 979
Score = 65.5 bits (158), Expect = 1e-10
Identities = 61/256 (23%), Positives = 111/256 (43%), Gaps = 23/256 (8%)
Query: 82 AYLAMDTEEGVEVVWNEVQFSERKNYKLQEEKVRAVFDNLI---QLEHLNIVKFHKYWAD 138
A L TE+ VVW EV + +L E++ R + ++ L+H NI+ ++ ++ D
Sbjct: 66 ATLYRRTEDDSLVVWKEVDLT-----RLSEKERRDALNEIVILALLQHDNIIAYYNHFMD 120
Query: 139 IKENKARVIFITEYMSSGSLKQFLKKTKKNHKTMNEKAWKRWCTQILSALSYLHSCDPPI 198
++ EY + G+L + K ++ K E+ + QI+SA+S +H I
Sbjct: 121 ----NTTLLIELEYCNGGNL--YDKILRQKDKLFEEEMVVWYLFQIVSAVSCIHKAG--I 172
Query: 199 IHGNLTCDTIFIQHNGLIKIGSVA-PDTINNHVKTCREEQKNLHFFAPEYGEVTNVTTAV 257
+H ++ IF+ LIK+G +N+ ++ +PE +
Sbjct: 173 LHRDIKTLNIFLTKANLIKLGDYGLAKKLNSEYSMAETLVGTPYYMSPELCQGVKYNFKS 232
Query: 258 DIYSFGMCALEMAVLEIQGNGESSYVPQEAISSAIQLLEDPLQR------EFIQKCLQSE 311
DI++ G E+ L+ + + I I+ +E + + + CL +
Sbjct: 233 DIWAVGCVIFELLTLKRTFDATNPLNLCVKIVQGIRAMEVDSSQYSLELIQMVHSCLDQD 292
Query: 312 PARRPTARELLFHPAL 327
P +RPTA ELL P L
Sbjct: 293 PEQRPTADELLDRPLL 308
>gi|38327572 serine/threonine protein kinase 6 [Homo sapiens]
Length = 403
Score = 65.1 bits (157), Expect = 2e-10
Identities = 72/290 (24%), Positives = 125/290 (43%), Gaps = 23/290 (7%)
Query: 42 SPEEEEESEDESEILEESPCGRWQKRREEVNQRNVPG-IDSAYLAMDTEEGVEVVWNEVQ 100
+PEEE S+ ++E ES +W E+ + G + YLA + + ++ +V
Sbjct: 109 NPEEELASKQKNE---ESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKF-ILALKVL 164
Query: 101 FSERKNYKLQEEKVRAVFDNLIQLEHLNIVKFHKYWADIKENKARVIFITEYMSSGSLKQ 160
F + E ++R + L H NI++ + Y+ D RV I EY G++ +
Sbjct: 165 FKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDA----TRVYLILEYAPLGTVYR 220
Query: 161 FLKKTKKNHKTMNEKAWKRWCTQILSALSYLHSCDPPIIHGNLTCDTIFIQHNGLIKIGS 220
L+K K +E+ + T++ +ALSY HS +IH ++ + + + G +KI
Sbjct: 221 ELQKLSK----FDEQRTATYITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIAD 274
Query: 221 VAPDTINNHVKTCREEQK--NLHFFAPEYGEVTNVTTAVDIYSFGMCALEMAVLEIQGNG 278
H + R L + PE E VD++S G+ E V +
Sbjct: 275 FGWSV---HAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 331
Query: 279 ESSYVPQEAISSAIQLLEDPLQ---REFIQKCLQSEPARRPTARELLFHP 325
+ + IS D + R+ I + L+ P++RP RE+L HP
Sbjct: 332 NTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHP 381
>gi|38327570 serine/threonine protein kinase 6 [Homo sapiens]
Length = 403
Score = 65.1 bits (157), Expect = 2e-10
Identities = 72/290 (24%), Positives = 125/290 (43%), Gaps = 23/290 (7%)
Query: 42 SPEEEEESEDESEILEESPCGRWQKRREEVNQRNVPG-IDSAYLAMDTEEGVEVVWNEVQ 100
+PEEE S+ ++E ES +W E+ + G + YLA + + ++ +V
Sbjct: 109 NPEEELASKQKNE---ESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKF-ILALKVL 164
Query: 101 FSERKNYKLQEEKVRAVFDNLIQLEHLNIVKFHKYWADIKENKARVIFITEYMSSGSLKQ 160
F + E ++R + L H NI++ + Y+ D RV I EY G++ +
Sbjct: 165 FKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDA----TRVYLILEYAPLGTVYR 220
Query: 161 FLKKTKKNHKTMNEKAWKRWCTQILSALSYLHSCDPPIIHGNLTCDTIFIQHNGLIKIGS 220
L+K K +E+ + T++ +ALSY HS +IH ++ + + + G +KI
Sbjct: 221 ELQKLSK----FDEQRTATYITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIAD 274
Query: 221 VAPDTINNHVKTCREEQK--NLHFFAPEYGEVTNVTTAVDIYSFGMCALEMAVLEIQGNG 278
H + R L + PE E VD++S G+ E V +
Sbjct: 275 FGWSV---HAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 331
Query: 279 ESSYVPQEAISSAIQLLEDPLQ---REFIQKCLQSEPARRPTARELLFHP 325
+ + IS D + R+ I + L+ P++RP RE+L HP
Sbjct: 332 NTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHP 381
>gi|38327568 serine/threonine protein kinase 6 [Homo sapiens]
Length = 403
Score = 65.1 bits (157), Expect = 2e-10
Identities = 72/290 (24%), Positives = 125/290 (43%), Gaps = 23/290 (7%)
Query: 42 SPEEEEESEDESEILEESPCGRWQKRREEVNQRNVPG-IDSAYLAMDTEEGVEVVWNEVQ 100
+PEEE S+ ++E ES +W E+ + G + YLA + + ++ +V
Sbjct: 109 NPEEELASKQKNE---ESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKF-ILALKVL 164
Query: 101 FSERKNYKLQEEKVRAVFDNLIQLEHLNIVKFHKYWADIKENKARVIFITEYMSSGSLKQ 160
F + E ++R + L H NI++ + Y+ D RV I EY G++ +
Sbjct: 165 FKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDA----TRVYLILEYAPLGTVYR 220
Query: 161 FLKKTKKNHKTMNEKAWKRWCTQILSALSYLHSCDPPIIHGNLTCDTIFIQHNGLIKIGS 220
L+K K +E+ + T++ +ALSY HS +IH ++ + + + G +KI
Sbjct: 221 ELQKLSK----FDEQRTATYITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIAD 274
Query: 221 VAPDTINNHVKTCREEQK--NLHFFAPEYGEVTNVTTAVDIYSFGMCALEMAVLEIQGNG 278
H + R L + PE E VD++S G+ E V +
Sbjct: 275 FGWSV---HAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 331
Query: 279 ESSYVPQEAISSAIQLLEDPLQ---REFIQKCLQSEPARRPTARELLFHP 325
+ + IS D + R+ I + L+ P++RP RE+L HP
Sbjct: 332 NTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHP 381
>gi|38327566 serine/threonine protein kinase 6 [Homo sapiens]
Length = 403
Score = 65.1 bits (157), Expect = 2e-10
Identities = 72/290 (24%), Positives = 125/290 (43%), Gaps = 23/290 (7%)
Query: 42 SPEEEEESEDESEILEESPCGRWQKRREEVNQRNVPG-IDSAYLAMDTEEGVEVVWNEVQ 100
+PEEE S+ ++E ES +W E+ + G + YLA + + ++ +V
Sbjct: 109 NPEEELASKQKNE---ESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKF-ILALKVL 164
Query: 101 FSERKNYKLQEEKVRAVFDNLIQLEHLNIVKFHKYWADIKENKARVIFITEYMSSGSLKQ 160
F + E ++R + L H NI++ + Y+ D RV I EY G++ +
Sbjct: 165 FKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDA----TRVYLILEYAPLGTVYR 220
Query: 161 FLKKTKKNHKTMNEKAWKRWCTQILSALSYLHSCDPPIIHGNLTCDTIFIQHNGLIKIGS 220
L+K K +E+ + T++ +ALSY HS +IH ++ + + + G +KI
Sbjct: 221 ELQKLSK----FDEQRTATYITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIAD 274
Query: 221 VAPDTINNHVKTCREEQK--NLHFFAPEYGEVTNVTTAVDIYSFGMCALEMAVLEIQGNG 278
H + R L + PE E VD++S G+ E V +
Sbjct: 275 FGWSV---HAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 331
Query: 279 ESSYVPQEAISSAIQLLEDPLQ---REFIQKCLQSEPARRPTARELLFHP 325
+ + IS D + R+ I + L+ P++RP RE+L HP
Sbjct: 332 NTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHP 381
>gi|38327564 serine/threonine protein kinase 6 [Homo sapiens]
Length = 403
Score = 65.1 bits (157), Expect = 2e-10
Identities = 72/290 (24%), Positives = 125/290 (43%), Gaps = 23/290 (7%)
Query: 42 SPEEEEESEDESEILEESPCGRWQKRREEVNQRNVPG-IDSAYLAMDTEEGVEVVWNEVQ 100
+PEEE S+ ++E ES +W E+ + G + YLA + + ++ +V
Sbjct: 109 NPEEELASKQKNE---ESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKF-ILALKVL 164
Query: 101 FSERKNYKLQEEKVRAVFDNLIQLEHLNIVKFHKYWADIKENKARVIFITEYMSSGSLKQ 160
F + E ++R + L H NI++ + Y+ D RV I EY G++ +
Sbjct: 165 FKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDA----TRVYLILEYAPLGTVYR 220
Query: 161 FLKKTKKNHKTMNEKAWKRWCTQILSALSYLHSCDPPIIHGNLTCDTIFIQHNGLIKIGS 220
L+K K +E+ + T++ +ALSY HS +IH ++ + + + G +KI
Sbjct: 221 ELQKLSK----FDEQRTATYITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIAD 274
Query: 221 VAPDTINNHVKTCREEQK--NLHFFAPEYGEVTNVTTAVDIYSFGMCALEMAVLEIQGNG 278
H + R L + PE E VD++S G+ E V +
Sbjct: 275 FGWSV---HAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 331
Query: 279 ESSYVPQEAISSAIQLLEDPLQ---REFIQKCLQSEPARRPTARELLFHP 325
+ + IS D + R+ I + L+ P++RP RE+L HP
Sbjct: 332 NTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHP 381
>gi|38327562 serine/threonine protein kinase 6 [Homo sapiens]
Length = 403
Score = 65.1 bits (157), Expect = 2e-10
Identities = 72/290 (24%), Positives = 125/290 (43%), Gaps = 23/290 (7%)
Query: 42 SPEEEEESEDESEILEESPCGRWQKRREEVNQRNVPG-IDSAYLAMDTEEGVEVVWNEVQ 100
+PEEE S+ ++E ES +W E+ + G + YLA + + ++ +V
Sbjct: 109 NPEEELASKQKNE---ESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKF-ILALKVL 164
Query: 101 FSERKNYKLQEEKVRAVFDNLIQLEHLNIVKFHKYWADIKENKARVIFITEYMSSGSLKQ 160
F + E ++R + L H NI++ + Y+ D RV I EY G++ +
Sbjct: 165 FKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDA----TRVYLILEYAPLGTVYR 220
Query: 161 FLKKTKKNHKTMNEKAWKRWCTQILSALSYLHSCDPPIIHGNLTCDTIFIQHNGLIKIGS 220
L+K K +E+ + T++ +ALSY HS +IH ++ + + + G +KI
Sbjct: 221 ELQKLSK----FDEQRTATYITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIAD 274
Query: 221 VAPDTINNHVKTCREEQK--NLHFFAPEYGEVTNVTTAVDIYSFGMCALEMAVLEIQGNG 278
H + R L + PE E VD++S G+ E V +
Sbjct: 275 FGWSV---HAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 331
Query: 279 ESSYVPQEAISSAIQLLEDPLQ---REFIQKCLQSEPARRPTARELLFHP 325
+ + IS D + R+ I + L+ P++RP RE+L HP
Sbjct: 332 NTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHP 381
>gi|62422554 p21-activated kinase 4 isoform 1 [Homo sapiens]
Length = 591
Score = 65.1 bits (157), Expect = 2e-10
Identities = 59/241 (24%), Positives = 108/241 (44%), Gaps = 36/241 (14%)
Query: 105 KNYKLQEEKVRAVFDNLIQL----EHLNIVKFHKYWADIKENKARVIFITEYMSSGSLKQ 160
K L++++ R + N + + +H N+V+ + + E + + E++ G+L
Sbjct: 350 KKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDE----LWVVMEFLEGGALTD 405
Query: 161 FLKKTKKNHKTMNEKAWKRWCTQILSALSYLHSCDPPIIHGNLTCDTIFIQHNGLIKIGS 220
+ H MNE+ C +L ALS LH+ +IH ++ D+I + H+G +K+
Sbjct: 406 IV-----THTRMNEEQIAAVCLAVLQALSVLHA--QGVIHRDIKSDSILLTHDGRVKLSD 458
Query: 221 VA-PDTINNHVKTCREEQKNLHFFAPEYGEVTNVTTAVDIYSFGMCALEMAVLEIQGNGE 279
++ V + ++ APE VDI+S G+ +EM +GE
Sbjct: 459 FGFCAQVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMV------DGE 512
Query: 280 SSYVPQEAISSAIQLLED-------------PLQREFIQKCLQSEPARRPTARELLFHPA 326
Y + + A++++ D P + F+ + L +PA+R TA ELL HP
Sbjct: 513 PPYFNEPPLK-AMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPF 571
Query: 327 L 327
L
Sbjct: 572 L 572
>gi|62422561 p21-activated kinase 4 isoform 2 [Homo sapiens]
Length = 438
Score = 65.1 bits (157), Expect = 2e-10
Identities = 59/241 (24%), Positives = 108/241 (44%), Gaps = 36/241 (14%)
Query: 105 KNYKLQEEKVRAVFDNLIQL----EHLNIVKFHKYWADIKENKARVIFITEYMSSGSLKQ 160
K L++++ R + N + + +H N+V+ + + E + + E++ G+L
Sbjct: 197 KKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDE----LWVVMEFLEGGALTD 252
Query: 161 FLKKTKKNHKTMNEKAWKRWCTQILSALSYLHSCDPPIIHGNLTCDTIFIQHNGLIKIGS 220
+ H MNE+ C +L ALS LH+ +IH ++ D+I + H+G +K+
Sbjct: 253 IV-----THTRMNEEQIAAVCLAVLQALSVLHA--QGVIHRDIKSDSILLTHDGRVKLSD 305
Query: 221 VA-PDTINNHVKTCREEQKNLHFFAPEYGEVTNVTTAVDIYSFGMCALEMAVLEIQGNGE 279
++ V + ++ APE VDI+S G+ +EM +GE
Sbjct: 306 FGFCAQVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMV------DGE 359
Query: 280 SSYVPQEAISSAIQLLED-------------PLQREFIQKCLQSEPARRPTARELLFHPA 326
Y + + A++++ D P + F+ + L +PA+R TA ELL HP
Sbjct: 360 PPYFNEPPLK-AMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPF 418
Query: 327 L 327
L
Sbjct: 419 L 419
>gi|62422563 p21-activated kinase 4 isoform 2 [Homo sapiens]
Length = 438
Score = 65.1 bits (157), Expect = 2e-10
Identities = 59/241 (24%), Positives = 108/241 (44%), Gaps = 36/241 (14%)
Query: 105 KNYKLQEEKVRAVFDNLIQL----EHLNIVKFHKYWADIKENKARVIFITEYMSSGSLKQ 160
K L++++ R + N + + +H N+V+ + + E + + E++ G+L
Sbjct: 197 KKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDE----LWVVMEFLEGGALTD 252
Query: 161 FLKKTKKNHKTMNEKAWKRWCTQILSALSYLHSCDPPIIHGNLTCDTIFIQHNGLIKIGS 220
+ H MNE+ C +L ALS LH+ +IH ++ D+I + H+G +K+
Sbjct: 253 IV-----THTRMNEEQIAAVCLAVLQALSVLHA--QGVIHRDIKSDSILLTHDGRVKLSD 305
Query: 221 VA-PDTINNHVKTCREEQKNLHFFAPEYGEVTNVTTAVDIYSFGMCALEMAVLEIQGNGE 279
++ V + ++ APE VDI+S G+ +EM +GE
Sbjct: 306 FGFCAQVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMV------DGE 359
Query: 280 SSYVPQEAISSAIQLLED-------------PLQREFIQKCLQSEPARRPTARELLFHPA 326
Y + + A++++ D P + F+ + L +PA+R TA ELL HP
Sbjct: 360 PPYFNEPPLK-AMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPF 418
Query: 327 L 327
L
Sbjct: 419 L 419
>gi|62422557 p21-activated kinase 4 isoform 1 [Homo sapiens]
Length = 591
Score = 65.1 bits (157), Expect = 2e-10
Identities = 59/241 (24%), Positives = 108/241 (44%), Gaps = 36/241 (14%)
Query: 105 KNYKLQEEKVRAVFDNLIQL----EHLNIVKFHKYWADIKENKARVIFITEYMSSGSLKQ 160
K L++++ R + N + + +H N+V+ + + E + + E++ G+L
Sbjct: 350 KKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDE----LWVVMEFLEGGALTD 405
Query: 161 FLKKTKKNHKTMNEKAWKRWCTQILSALSYLHSCDPPIIHGNLTCDTIFIQHNGLIKIGS 220
+ H MNE+ C +L ALS LH+ +IH ++ D+I + H+G +K+
Sbjct: 406 IV-----THTRMNEEQIAAVCLAVLQALSVLHA--QGVIHRDIKSDSILLTHDGRVKLSD 458
Query: 221 VA-PDTINNHVKTCREEQKNLHFFAPEYGEVTNVTTAVDIYSFGMCALEMAVLEIQGNGE 279
++ V + ++ APE VDI+S G+ +EM +GE
Sbjct: 459 FGFCAQVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMV------DGE 512
Query: 280 SSYVPQEAISSAIQLLED-------------PLQREFIQKCLQSEPARRPTARELLFHPA 326
Y + + A++++ D P + F+ + L +PA+R TA ELL HP
Sbjct: 513 PPYFNEPPLK-AMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPF 571
Query: 327 L 327
L
Sbjct: 572 L 572
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.129 0.369
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,506,892
Number of Sequences: 37866
Number of extensions: 1064382
Number of successful extensions: 8254
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 100
Number of HSP's successfully gapped in prelim test: 410
Number of HSP's that attempted gapping in prelim test: 7311
Number of HSP's gapped (non-prelim): 935
length of query: 535
length of database: 18,247,518
effective HSP length: 107
effective length of query: 428
effective length of database: 14,195,856
effective search space: 6075826368
effective search space used: 6075826368
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.